LOC120573387


Basic Information

Item Value
gene id LOC120573387
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 22607640 ~ 22608359 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641702.1
gtatgtgtgtgtgtgtgtgtgtgtgtgaccagagGAGCAGGAGAACAGGAGAAGACGGCGACAGAGAGGGTCGCAGAGACGGTGGCGTGAGGGGACAATGGGACTGAGAGCAAAGAGATGCCTCCTGCGGTCTAGGAGAGTCGTCTGAAAGCTCTTATTTCTACCCTGAGGAGCGAGCATCAAGGAGGGATCATCGTGGAGCTATAGacgaggatacacgagagcagccttccctaaagccgtgcagctgaaggagtggctaactccgcccaaacgGACGGATTCAAGtggcttcagaggaaaggaagtCTCATCCCTCtgaaacacatttgctcgttgcctctctcctctcctgatGTCCCCGCGTCTCTCCCGTGCTTCCTCGGGGGGGAGGAACTAAGacaaggaagggaggcaagagGAGGACTCGAGGAGGCAACATGAGATGCAGCGTATGTCTAATGTCACATACATTTTCAGCATACATTTTACGGAGCTGATGGAAAGGCGACTGTAGAGGGCCTCACCTTCTACAACCTTTACCACTGACACAACAGCAGGGTTAATAAATTAAGatcatgaaattaaaaaaataaaatctgtgaaCCAAACACCCTGATTACTAATGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641702.1 True 631 lncRNA 0.50 2 22607640 22608359

Neighbor

gene id symbol gene type direction distance location
LOC120573582 NA coding downstream 1649 22581320 ~ 22605991 (-)
LOC120573633 NA coding downstream 27369 22573551 ~ 22580271 (-)
LOC120573632 NA coding downstream 34494 22570796 ~ 22573146 (-)
usp12b usp12,LOC107707922,LOC103480258,LOC103363176 coding downstream 56665 22526589 ~ 22550975 (-)
phka1a phka1 coding downstream 407591 22164235 ~ 22200049 (-)
dachb dach2,LOC103363055,LOC103389227 coding upstream 268331 22876690 ~ 22978132 (-)
stk26 NA coding upstream 419045 23027404 ~ 23057243 (-)
LOC120573388 NA coding upstream 470104 23078463 ~ 23094503 (-)
LOC120573305 NA coding upstream 489254 23097613 ~ 23110241 (-)
LOC120573308 NA coding upstream 504556 23112915 ~ 23115588 (-)
G145395 NA non-coding downstream 135815 22464549 ~ 22471825 (-)
LOC120572729 NA non-coding downstream 346703 22260461 ~ 22260937 (-)
G145345 NA non-coding downstream 350362 22232334 ~ 22257278 (-)
G145343 NA non-coding downstream 376326 22231072 ~ 22231314 (-)
G145337 NA non-coding downstream 405697 22201581 ~ 22201943 (-)
LOC120573226 NA non-coding upstream 136589 22744948 ~ 22746278 (-)
G145508 NA non-coding upstream 206211 22814570 ~ 22814816 (-)
G145510 NA non-coding upstream 209322 22817681 ~ 22818189 (-)
G145514 NA non-coding upstream 228809 22837168 ~ 22839383 (-)
G145530 NA non-coding upstream 452099 23060458 ~ 23146114 (-)
G145342 NA other downstream 377138 22230059 ~ 22230502 (-)
shroom4 shroom4,LOC107741461,LOC107562256,LOC107691917 other downstream 481159 22045501 ~ 22126481 (-)
ccnb3 ccnb3 other downstream 628214 21881290 ~ 21979426 (-)
si:dkey-172j4.3 LOC102306481,LOC103363024,LOC100708735,LOC101468909,LOC102781820,LOC101073787,LOC108246481,LOC106609052 other downstream 1169184 21351242 ~ 21438456 (-)
G145509 trpc5,LOC103389248 other upstream 206547 22814906 ~ 22817623 (-)
LOC120572139 NA other upstream 1241311 23849670 ~ 23855268 (-)
LOC120572715 NA other upstream 1446641 24055000 ~ 24075036 (-)
LOC120572219 NA other upstream 1523867 24132226 ~ 24140420 (-)
LOC120573113 NA other upstream 1625282 24233641 ~ 24363065 (-)

Expression


Co-expression Network