LOC120573458


Basic Information

Item Value
gene id LOC120573458
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 11985829 ~ 11986624 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641728.1
GGCCCAAACTAATTCTGAAGAACGTGAAGCCGCTTAGAAACTAAACACAGGCAAAGGTCCAACTACTCCTGCCTCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641728.1 True 77 lncRNA 0.48 3 11985829 11986624

Neighbor

gene id symbol gene type direction distance location
LOC120573708 ddit4l,LOC103390244 coding downstream 12342 11970407 ~ 11973487 (-)
spag17 LOC104959999,LOC104962483 coding downstream 18057 11936610 ~ 11967772 (-)
trnag-gcc NA coding downstream 28430 11957329 ~ 11957399 (-)
LOC120573491 lrfn4,LOC103363228,LOC102311587 coding downstream 225970 11724497 ~ 11759859 (-)
trnam-cau_43 NA coding downstream 501273 11484485 ~ 11484556 (-)
LOC120572708 nfib coding upstream 145782 12132406 ~ 12198738 (-)
zdhhc21 zdhhc21 coding upstream 221948 12208572 ~ 12217427 (-)
plin2 plin2 coding upstream 304099 12290723 ~ 12294499 (-)
trnai-aau_26 NA coding upstream 424419 12411043 ~ 12411116 (-)
saxo2 NA coding upstream 431570 12418194 ~ 12421034 (-)
G142790 NA non-coding downstream 129475 11842267 ~ 11856354 (-)
G142766 LOC103363230 non-coding downstream 422897 11553786 ~ 11562932 (-)
G142758 slc3a2 non-coding downstream 446311 11490414 ~ 11539518 (-)
G142751 NA non-coding downstream 538318 11441681 ~ 11447511 (-)
LOC120573191 NA non-coding downstream 545993 11439304 ~ 11439836 (-)
G142846 NA non-coding upstream 236649 12223273 ~ 12224139 (-)
G142839 NA non-coding upstream 284211 12270835 ~ 12275611 (-)
G142868 NA non-coding upstream 295109 12281733 ~ 12287351 (-)
G142925 NA non-coding upstream 587913 12574537 ~ 12577019 (-)
G142952 sepsecs non-coding upstream 697095 12683719 ~ 12686501 (-)
LOC120573414 LOC104960590,LOC106514884,LOC103390236,LOC107084127,LOC106908847,LOC101464045,LOC100704366,LOC102310755,LOC102193047,LOC102788271,LOC103369314,LOC103129513 other downstream 50056 11910451 ~ 11935773 (-)
prox3 LOC104947722,LOC103363229 other downstream 518810 11455015 ~ 11467019 (-)
G142745 NA other downstream 541890 11441961 ~ 11443939 (-)
gpha2 gpha2 other downstream 831300 11149851 ~ 11154529 (-)
G142669 NA other downstream 841091 10930022 ~ 11144738 (-)
LOC120573137 ppp3ca,LOC103369319 other upstream 8290 11994914 ~ 12063426 (-)
G142916 NA other upstream 427130 12413754 ~ 12415155 (-)
rpl34 rpl34,LOC107566275 other upstream 612129 12598753 ~ 12602673 (-)
LOC120572742 rbpms,LOC107086924,LOC107377421 other upstream 3100241 15086865 ~ 15121956 (-)
phf23b phf23 other upstream 3710475 15697099 ~ 15702094 (-)

Expression


Co-expression Network