LOC120573673


Basic Information

Item Value
gene id LOC120573673
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 796708 ~ 801154 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641742.1
ATCAGAGGAAAGGGAGGACACCGATTTCACCCCACTGCCAGGGAATTTGCTGCAGCACTAAGGAGTGCATCAGTGGCAAACATCATCAGCTTGCAGGGCAGTGCTACAAACTGCATTCCTGATAATGCCACTCAGTTGTTGCAGTCCACTCCTGTGAAATGCAGTGAGCAGattgaatgtgaaaatgaagagCTGGATGAAGAGCAAATAATGGCTAATGAGCAGGAGGGGGGCAAGGGAAGTTGCAGGCTTTTGTCGAAGTTTTGAGGTTCCCGGTTCGATCCCCGCCCGCGGTGTGCAAAGACGGAGAACACACATCCGGGAACGATGAGCCATTCGTATACAAGCTTCACCTGAGCTCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641742.1 True 363 lncRNA 0.51 3 796708 801154

Neighbor

gene id symbol gene type direction distance location
LOC120573672 LOC105024657,LOC106023958 coding upstream 2829 790858 ~ 793879 (+)
LOC120573513 NA coding upstream 45053 748644 ~ 751655 (+)
LOC120573607 NA coding upstream 252266 543129 ~ 544442 (+)
LOC120573509 NA coding upstream 481257 314019 ~ 315451 (+)
LOC120573670 NA coding upstream 726042 69341 ~ 70666 (+)
LOC120573671 LOC107990212,LOC107990219,LOC107990208 coding downstream 11389 812543 ~ 815209 (+)
LOC120573524 NA coding downstream 62164 863318 ~ 890296 (+)
grpel1 grpel1,LOC102799061 coding downstream 667210 1468364 ~ 1478441 (+)
ccdc96 NA coding downstream 687330 1488484 ~ 1505654 (+)
trmt10a trmt10a coding downstream 707647 1508801 ~ 1519565 (+)
G140313 NA non-coding upstream 49818 746590 ~ 746890 (+)
G140309 NA non-coding upstream 136790 659708 ~ 659918 (+)
G140292 rubcnl non-coding upstream 231831 564301 ~ 564877 (+)
G140286 NA non-coding upstream 292976 503461 ~ 503732 (+)
G140271 NA non-coding upstream 375194 420894 ~ 421514 (+)
LOC120572243 NA non-coding downstream 24834 825988 ~ 833455 (+)
G140341 NA non-coding downstream 77946 879100 ~ 879497 (+)
G140343 NA non-coding downstream 79223 880377 ~ 880855 (+)
G140354 NA non-coding downstream 151101 952255 ~ 952469 (+)
G140359 NA non-coding downstream 210013 1011167 ~ 1012178 (+)
LOC120572292 NA other upstream 173673 621116 ~ 623035 (+)
G140263 NA other upstream 460532 335882 ~ 336176 (+)
frem1a frem1,LOC106908230,LOC105925506,LOC101079287,LOC108244244 other downstream 876056 1677210 ~ 1725468 (+)
G140582 NA other downstream 1128469 1929623 ~ 2030627 (+)
G140594 NA other downstream 1221438 2022592 ~ 2032225 (+)
G140613 NA other downstream 1254285 2055439 ~ 2059367 (+)
ablim2 ablim2 other downstream 2026898 2828052 ~ 2954690 (+)

Expression


Co-expression Network