LOC120573677


Basic Information

Item Value
gene id LOC120573677
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 19755220 ~ 19755722 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005641744.1
tttTGCTGGCTCGTGTTACACTTGACGTCCCCATCAAGAACTTTATCGCTTAACGTTAGTAGTCTCCGTCTTGTGTCGCTGTCTCACGGTGTTGCACTTGAGTCGACGTCTCCATCAAGGAATTTATCGCTTAACGTTAGTAGTCTCCGTCTTGTGTCGCTGTCTCACGGTGTTGCACTTGAGTCGACGTCTCCATCAAGGAATTTGTAAGTAACATTGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005641744.1 True 221 lncRNA 0.46 3 19755220 19755722

Neighbor

gene id symbol gene type direction distance location
arhgef11 arhgef11 coding downstream 52997 19679255 ~ 19702223 (-)
LOC120573581 LOC103480354,LOC103144605,LOC104935705,LOC104965865 coding downstream 77598 19667699 ~ 19677622 (-)
LOC120572523 NA coding downstream 167143 19587130 ~ 19588077 (-)
LOC120572473 NA coding downstream 201379 19529160 ~ 19553841 (-)
LOC120572474 NA coding downstream 231230 19512028 ~ 19523990 (-)
LOC120572266 NA coding upstream 124618 19880340 ~ 19894923 (-)
cbln11 NA coding upstream 309074 20064796 ~ 20070624 (-)
LOC120572528 NA coding upstream 325019 20080741 ~ 20085137 (-)
si:ch211-63p21.1 LOC103371025,LOC102193822,LOC102788031,LOC101475184,LOC100709095 coding upstream 331725 20087447 ~ 20093439 (-)
LOC120572322 NA coding upstream 412317 20168039 ~ 20173402 (-)
LOC120573678 NA non-coding downstream 8395 19746505 ~ 19746825 (-)
LOC120573676 NA non-coding downstream 12439 19739358 ~ 19742781 (-)
G144585 NA non-coding downstream 87723 19666458 ~ 19667497 (-)
LOC120572478 NA non-coding downstream 208797 19544171 ~ 19546423 (-)
G144476 NA non-coding downstream 519696 19234321 ~ 19235524 (-)
G144776 LOC104967121 non-coding upstream 121952 19877674 ~ 19879627 (-)
LOC120572271 NA non-coding upstream 172795 19928517 ~ 19932978 (-)
G144797 NA non-coding upstream 232852 19988574 ~ 20039742 (-)
G144803 NA non-coding upstream 258726 20014448 ~ 20016488 (-)
G144816 NA non-coding upstream 306088 20061810 ~ 20062338 (-)
si:cabz01074946.1 NA other downstream 89428 19657083 ~ 19665792 (-)
LOC120572670 NA other downstream 401914 19282933 ~ 19353306 (-)
prkd4 LOC103376196 other downstream 488867 19247950 ~ 19266353 (-)
clcn3 clcn3 other downstream 698438 18962866 ~ 19056782 (-)
G144258 NA other downstream 1157989 18595102 ~ 18597231 (-)
G144730 LOC100695354,LOC106632790,LOC105940461,LOC104965881,LOC101481059,LOC106632521,LOC103369240,LOC102791106 other upstream 20958 19776680 ~ 19797530 (-)
LOC120573300 slc12a6 other upstream 1071561 20827283 ~ 20863889 (-)
nop10 NA other upstream 1109035 20864757 ~ 20867106 (-)
LOC120573168 LOC103355779 other upstream 1150733 20906455 ~ 20929559 (-)
si:dkey-172j4.3 LOC102306481,LOC103363024,LOC100708735,LOC101468909,LOC102781820,LOC101073787,LOC108246481,LOC106609052 other upstream 1595520 21351242 ~ 21438456 (-)

Expression


Co-expression Network