Fish Transcriptome and Expression Database

trnal-aag_4

Item	Value
gene id	trnal-aag_4
gene name	NA
gene type	non-coding
species	eurasian perch (Perca fluviatilis)
category of species	economic fish

Item	Value
chromosome id	NC_053125.1
NCBI id	CM020922.1
chromosome length	39125861
location	385277 ~ 385358 (-)
genome version	GENO_Pfluv_1.0_2020_eurasian_perch_Genome

>unassigned_transcript_665
GGTAGTGTGGCCGAGTGGTCTAAGGCGCTGGATTAAGGCTCCAGTCTCTCTGGaggcgtgggttcaaatcccaccacTGCCA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
unassigned_transcript_665	True	82	tRNA	0.59	1	385277	385358

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

gene id	symbol	gene type	direction	distance	location
LOC120573587	NA	coding	downstream	247040	135443 ~ 138237 (-)
LOC120573590	NA	coding	upstream	215276	600634 ~ 606718 (-)
LOC120573525	mrps28	coding	upstream	521187	906545 ~ 913680 (-)
sorcs2	sorcs2	coding	upstream	632900	1018258 ~ 1429717 (-)
LOC120573289	NA	coding	upstream	1106916	1492274 ~ 1500316 (-)
slc1a1	slc1a1	coding	upstream	1165170	1550528 ~ 1574124 (-)
trnal-uag_1	NA	non-coding	downstream	1756	383440 ~ 383521 (-)
trnam-cau_28	NA	non-coding	downstream	2430	382776 ~ 382847 (-)
trnal-aag_3	NA	non-coding	downstream	3496	381700 ~ 381781 (-)
trnal-uag	NA	non-coding	downstream	5029	380167 ~ 380248 (-)
trnam-cau_27	NA	non-coding	downstream	5695	379511 ~ 379582 (-)
trnam-cau_29	NA	non-coding	upstream	3193	388551 ~ 388622 (-)
trnam-cau_30	NA	non-coding	upstream	4402	389760 ~ 389831 (-)
trnam-cau_31	NA	non-coding	upstream	7898	393256 ~ 393327 (-)
trnam-cau_32	NA	non-coding	upstream	9742	395100 ~ 395171 (-)
trnam-cau_33	NA	non-coding	upstream	11813	397171 ~ 397242 (-)
G140274	NA	other	upstream	58192	443550 ~ 451670 (-)
tada2b	tada2b	other	upstream	1097431	1482789 ~ 1488426 (-)
tspan5a	LOC100711712,LOC102299272,LOC102195201,LOC105938388,LOC103480072	other	upstream	1237901	1623259 ~ 1649432 (-)
LOC120573528	NA	other	upstream	1541774	1927132 ~ 2032506 (-)
G140615	NA	other	upstream	1666123	2051481 ~ 2058191 (-)

species	gene id	symbol	gene type	chromosome	NCBI id	location
rainbow trout (Oncorhynchus mykiss)	trnal-aag-272	NA	coding	NW_023494144.1	JAAXML020000236.1	56082 ~ 56163 (-)