XLOC_004843 (ANKFN1)


Basic Information

Item Value
gene id XLOC_004843
gene name ANKFN1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007123.7
NCBI id CM002896.2
chromosome length 49182954
location 32292564 ~ 32374156 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00009562
TATGAGCCAGCAGATGCAGAACCTGCAGCTGACGCAGAGCAAGAAGGGGGCTGGTCCCGCCTCCCCCAGCGCTGCCAAACGCCTCTACCGGAACCTCTCCGAGAAGTTTAAAGGGAGCCACTCATCCTTCGAGGATGCCTACTTTTTCGGCCGATCCGACCGTATACGCAAAGTATCAAGCAGCGAGGCTCTGTTCGAGGCTGTTGAACAGCAGGATCTGGATGCCGTTCAGATCCTGCTGTTTCAGTACACAGCTGATGAACTGGACCTGAACACCCCCAATAGTGAAGGCCTGACGCCTCTGGACATCTCCATCATGACCAATAACGTTCCCATCGCCAAACTGTTGCTTAAAGCTGGAGGGAAGGAGAGCCCTCACTTTGTCAGTTTGGAGAGCAGAGACGCTCACCTCTCAGCACTAGTCCAGGAAGCCCAAAGGAGAGCCAGTGAACTGTCCAACCAGGTGATGAGAGAAAGTCTCAGCCTGGAAACGTCTGACAAAGAAAAACAGCTCAAAGCTTGGGAGTGGCGATGCAAACTCTACAAGCGCATGCGCACAGGATTCGAGCATGCACGGCAGCCGGAGGCTCCATTGATGGTGCGTCTGAGTGTGACCGGCAGCACGACTCTCACTGTTAGCTTTCAGGAACCTGCCAGCATgaattcagctgtggtgaccaaATACAAAGTTGAATGGAGCTGTCTGAAGGACTTCTCTTTGTTAGCCGGAGAACTGATCCTTGAGAATCTGCAGTCCCTCAAATGCACAATTACAGGCCTCACCATGGGTAGGCAGTACTATGTTCAAGTCTCTGCTTACAATATGAAGGGTTGGGGTCCAGCACAACTTTCTCAGCCTCCTTCAGCTGTTCCCTCCAactgGAAGGACTGTGATGGGAGAGAAAGCAGGAGGAGAGGTCACATCGAGGCCATGGAGAGGCTCTTACAGCAGGTTCGAGCCACACACCAGCACTACTGCTGtggagACACATCAAAGTTGCAGAATCCAAGTCGTAAACAGTCTGTGTCCCGGAGCCTGAAGCACCTTTTTCACTCCTCTACGAAATTTGTCAAGAGTCTTAAAAGGGGAGTTTATATAGCGTCAGTATTTTACCATAAGGACAGTCTGCTAGTGACTAATGAGGATCAGATCCCCATAGTGGAGGTGGACGATTCATACAGCAGCTCCCTCATGCAGGACTTTCTGTGGTTCACCAAGctttCTTGTATGTGGGAGGACGTCCGGTGGCTCAGACAAAGCCTGGCAGTCTCCACCTCATCCTCTTCCACTCTGCAGTCCAGACAGAAGATGCTGGCGGCCGCGGGACAACTGCAGAATCTTCTGGGCACTCACAACCTGGGTCGAGTCCATTATGAGCCCATTAAAGATCGTCATGGAAATGTGCTGCTTGTGACGGTGAGGGAAATGGACAGTCTTTACTCCTTCTTCAACGGGAAGTGGATGCAAGTCTCCAAACTGCAGAGTCAGAGGAAGTCCCTGTCTACACCTGAGGAACCATATGCCCTCGACATCCTACTCATCACCatacagGACATTCTGGCGTATCAGAGACGGAGTCAGCACCGGCTGTCCTCTGGCCTTTATCTGGGTTACCTGAAACTCAGCAGCTCTGTGGATCAGATCAAGGTTCTGGTTCCTCAGCGGATGCCCAACATGCTTTGCCACACCAAGATACGAGACAACTGGAACGTGTCAAGGGATGAGTGGGAATGGCTGCAGTCACTGTCTGGCCCTGTGGAGGTGGAAAGAGCAGATCAGGCTACAGGCTGCCTCCTTTTCTCTGAGCTCCAGACAGCCATTAAAAGTCTGCTGCACCAGATTAATCTACCTCTCCACCAGGCCAAGCACTTCCGTCTCTACACACACGAGGTGCTGGAGCTGGGTCACAATGTGTCCTTTCTTCTGCTGCTGCCCGCCTCAGACGACGTCTGCTCTGCCCCGGGACAGACCAACCCCTACACACCACACTCGGGGTTCCTCAACCTCCCTCTTCAAATGTTTGAGCTCGTTCATTTCTGCTCGTATAAGGAGAAATTCATCAGTCTTTACTGCCGGCTGTCCTCAGTGCTGGATCTGGATGCTCTGATTACCCAGCAGGCTTTTAGAGAGGCCATCACTGACTCAGAGGTGTCCACTGCCAAACAGAGGCACCAGCACATTCTGGACTACATTCAGcaATTGGACGAGATGTGGCGAGAAGTCCGCTGGATCACCAATGCGCTGCAGTACGCCCGCTATAAACAGCCTCTCGGTTGGGTGCCGATCACCTGGCTAGTAGATGTCAGCGTGGAGCCTCCTGTCCAGAAGAATGACTCCACGTCGTCTAACACGGACTACGTGCCCACTCCCTCACCCTCTCCAGAAATGAGAAGAAGAAAGCCCACTATTGAGTCCCAGCCAGGCTCAGATGAAGAAGGCTGCTCAGAAGTTTTCCTTCCCACTGACAGTGACTATGACTCCAGTGATGCCCTGAGCCCTCGAGACCTAGACTTAGTTTATTCCTCAGCCCAGGATCTCTCCCATCAGGCCGTGCATGTCCTCAGTGGCAGCGCTCCCGATGTCCTCCAAATGCACGATCTTAAATACAGCGTCTGCTCCAAGTCGATCCTGGAGACTGAATCCTGCACAAAAGATTTGGAGGATCTATCGCTCTCCTCTTACTCCGTGAAGACCACCGACAAACCGTCCCGCTCCAAGTTTCTTGCCGATGCCCCAACAAAACGCAAGCTGCTGTCCAAAAGCCATCCTCAGAGGAGTTATTTCGGCGGACCACACCGCTGGCTTCGTGTACAAAGCGAAAGCCACACTCCGTCGCTTTCCGAAGGTATTTACACTAGACAGAGTGATATCGACCTCCCGCTGGAGACACCACTTTCAATACCGCACTCGCCCACTACCTCCTACAGTCTGGATGAGTACAGGCAGCCCTACAGAGAATCCAAACCCAACGTTCGCAGAATATTTGTAGAGTCATGCAGCAAGACTTCACCCTGTAGAGATGCACCGCATtgggaggaagaggaggagaaagGCTCACGAGGAGCAACGGcgtcgggggctcgtccgggatacagCTCAACATCGGAAGCTCAGGATGTGGATTCAGATGAGCAAACTAATGAACAAGTGTCGGAGATCCTCAGCAGCACTCTTTAG
>TCONS_00009563
CTGGTTTTATCTAGCTGTTGATATTGTGTAGAAAAACACAATTTTTCTACACAAACAGAaaacagaacatttaaaaaatatatgtcttGTTTTTTACAGGGTAGGCAGTACTATGTTCAAGTCTCTGCTTACAATATGAAGGGTTGGGGTCCAGCACAACTTTCTCAGCCTCCTTCAGCTGTTCCCTCCAactgGAAGGACTGTGATGGGAGAGAAAGCAGGAGGAGAGGTCACATCGAGGCCATGGAGAGGCTCTTACAGCAGGTTCGAGCCACACACCAGCACTACTGCTGtggagACACATCAAAGTTGCAGAATCCAAGTCGTAAACAGTCTGTGTCCCGGAGCCTGAAGCACCTTTTTCACTCCTCTACGAAATTTGTCAAGAGTCTTAAAAGGGGAGTTTATATAGCGTCAGTATTTTACCATAAGGACAGTCTGCTAGTGACTAATGAGGATCAGATCCCCATAGTGGAGGTGGACGATTCATACAGCAGCTCCCTCATGCAGGACTTTCTGTGGTTCACCAAGctttCTTGTATGTGGGAGGACGTCCGGTGGCTCAGACAAAGCCTGGCAGTCTCCACCTCATCCTCTTCCACTCTGCAGTCCAGACAGAAGATGCTGGCGGCCGCGGGACAACTGCAGAATCTTCTGGGCACTCACAACCTGGGTCGAGTCCATTATGAGCCCATTAAAGATCGTCATGGAAATGTGCTGCTTGTGACGGTGAGGGAAATGGACAGTCTTTACTCCTTCTTCAACGGGAAGTGGATGCAAGTCTCCAAACTGCAGAGTCAGAGGAAGTCCCTGTCTACACCTGAGGAACCATATGCCCTCGACATCCTACTCATCACCatacagGACATTCTGGCGTATCAGAGACGGAGTCAGCACCGGCTGTCCTCTGGCCTTTATCTGGGTTACCTGAAACTCAGCAGCTCTGTGGATCAGATCAAGGTTCTGGTTCCTCAGCGGATGCCCAACATGCTTTGCCACACCAAGATACGAGACAACTGGAACGTGTCAAGGGATGAGTGGGAATGGCTGCAGTCACTGTCTGGCCCTGTGGAGGTGGAAAGAGCAGATCAGGCTACAGGCTGCCTCCTTTTCTCTGAGCTCCAGACAGCCATTAAAAGTCTGCTGCACCAGATTAATCTACCTCTCCACCAGGCCAAGCACTTCCGTCTCTACACACACGAGGTGCTGGAGCTGGGTCACAATGTGTCCTTTCTTCTGCTGCTGCCCGCCTCAGACGACGTCTGCTCTGCCCCGGGACAGACCAACCCCTACACACCACACTCGGGGTTCCTCAACCTCCCTCTTCAAATGTTTGAGCTCGGTACACTGGCTTCTGTTTCAACCCCTACAATATTAGCTCAGTTGGCCTTATAAAAATCCACAGATTCCTCCCCTCTCTGCCCCCAGTCACACTCCCTTAGGACCTCTAGTAAatcaagcagacacacacacacacacacacacatatgcagcaCCACAGCTAGCCAAATAGCCACCCGCCCCCCTCGCTGAGACCAGACTGAGTAAAATAAGGAAAGGTTAAACAAGTAATCAAtattataattcaataaaatgtgttttaaagaatggaGGATCATTTTCATCCAAATAGCAGGGTTTATTTTGAGACGCGAGGGCAAACCGTGTGCTTGTGTTCTTAGCAGCGGTGCCAGTTTGAACACTTAGTAGCTTATTCAGCTGCTGTTGTGGGGAGAGTTTCAAACAACTTTTTAAACGTTATACTGTGAGGTAGTTTCAGCCCAAACACCATACACTTGTAAACCACCCACAGATTTCCATTacaaaaacatcttttaaaaagatCCGCCAGTGTTTTGGGGACATTAATGATAACCTCGCCGGGGTCTCAGTTTCACTCCTCACACCACCCTGTGTAATGCAATAACATCTCACTCATATAGTAGCTATGCTAACTATAGTGttcgtgtttttgttttgtctccTGGTGCAGTTCATTTCTGCTCGTATAAGGAGAAATTCATCAGTCTTTACTGCCGGCTGTCCTCAGTGCTGGATCTGGATGCTCTGATTACCCAGCAGGCTTTTAGAGAGGCCATCACTGACTCAGAGGTGTCCACTGCCAAACAGAGGCACCAGCACATTCTGGACTACATTCAGGTATGATGAAGCTCTCCGTGAAGGATGATTCCATTTGACATTTTTCTCTCCCTGTTGTCAcataatatatgatatattaaaATCTCATAAtcctaaagggcacctattttacctatTTAGTTGTTTGTcgttattatacctttcagaatgttACAACtttctgctctaaacacaatgtagctgtttttgttgcctgtgcctttaatgctagttctccccgcccaccgctaccacatgcctgtcagagtgtgcctcaatctcttgcttggctgcgtcagataaacagcagagtGACAGACATAAATGAAGCAGATcccacgtaacgtttgtgagaaatactacagtaagaagtTTACCAATGAATATTTGATGTAtctgttgtggagttaattcaagcctttcgatgagtcacacacaatgtcgttacaaagttcacgcacacaaacagacacacacacagagagcacgcatttttgcactgcaaatgtgacaggatacacaataatatccactgctgtgtggaaatccattatgttaatgtacaaaaaataataatttaacatccTCAAACTATCTaataaaatatctattaaaataattatactgACATGGCTGCACTGATGAAgaaaagctgaagtaaatcgctgtaattcattacagaaaaacacagttttaaacacattttaaacttgtgaaactcattcttgatcacatttgatgatgtttgatgatcacagcgagctcgACAGATCTTTTATTTCTGattgctttgcgcatgtcctgtcttTTTGGTATGATTATACGCATTGCTAAgtagacatgttaatacgtggctgtcagtcaattcagtgggcagggaaaccacactcctacatcacgttgcagtggacctcaaaatgggagggatttgggtcctattggGTCACCTATatgtgactgtggacacactttacctacacacagttctgtccacaCTACTAAAATATTTTCACCATAGATGCC
>TCONS_00009564
CTCAAGGATGGAAAATATGAAAGCGGTAGTCGTGAAGATTCACTGCACGGAGGTTAACGGCTCTGATTGAAAACACATTTTACCTCTCATTTCGCTTCTGCACACTAAATAGGAGCAATATGTACAATTCGGGGCTCTGACGTGCTGTGATTGGTGAACAGAGGAAGATgacacaaaataaattatgatattaGTCACGGTCATGCCCCTTCAGACTTCACAGCAAGTTTTCCGTGGCCTCCTTTTGAAGCTTTTGTGCGACGCGCTTTAATGGCTTGAAAAGCTTTGTGATGTTTGTGGGGAAAATACCGCATTTCTCACACTGAAAGCTGCCATTTGCATTTATATCCACTCAACATTTAAATAGCACCGATGAACCTTATTTTCAGCATCGTCAATGAAATAACAGcactctttgttgttgtttttttgtgtttttaaagcaATTGGACGAGATGTGGCGAGAAGTCCGCTGGATCACCAATGCGCTGCAGTACGCCCGCTATAAACAGCCTCTCGGTTGGGTGCCGATCACCTGGCTAGTAGATGTCAGCGTGGAGCCTCCTGTCCAGAAGAATGACTCCACGTCGTCTAACACGGACTACGTGCCCACTCCCTCACCCTCTCCAGAAATGAGAAGAAGAAAGCCCACTATTGAGTCCCAGCCAGGCTCAGATGAAGAAGGCTGCTCAGAAGTTTTCCTTCCCACTGACAGTGACTATGACTCCAGTGATGCCCTGAGCCCTCGAGACCTAGACTTAGTTTATTCCTCAGCCCAGGATCTCTCCCATCAGGCCGTGCATGTCCTCAGTGGCAGCGCTCCCGATGTCCTCCAAATGCACGATCTTAAATACAGCGTCTGCTCCAAGTCGATCCTGGAGACTGAATCCTGCACAAAAGATTTGGAGGATCTATCGCTCTCCTCTTACTCCGTGAAGACCACCGACAAACCGTCCCGCTCCAAGTTTCTTGCCGATGCCCCAACAAAACGCAAGCTGCTGTCCAAAAGCCATCCTCAGAGGAGTTATTTCGGCGGACCACACCGCTGGCTTCGTGTACAAAGCGAAAGCCACACTCCGTCGCTTTCCGAAGGTATTTACACTAGACAGAGTGATATCGACCTCCCGCTGGAGACACCACTTTCAATACCGCACTCGCCCACTACCTCCTACAGTCTGGATGAGTACAGGCAGCCCTACAGAGAATCCAAACCCAACGTTCGCAGAATATTTGTAGAGTCATGCAGCAAGACTTCACCCTGTAGAGATGCACCGCATtgggaggaagaggaggagaaagGCTCACGAGGAGCAACGGcgtcgggggctcgtccgggatacagCTCAACATCGGAAGCTCAGGATGTGGATTCAGATGAGCAAACTAATGAACAAGTGTCGGAGATCCTCAGCAGCACTCTTTAG

Function

symbol description
ankfn1 Predicted to be involved in establishment of mitotic spindle orientation and regulation of establishment of bipolar cell polarity. Predicted to be active in spindle. Orthologous to human ANKFN1 (ankyrin repeat and fibronectin type III domain containing 1).

GO: NA

KEGG:

id description
ko04990 Domain-containing proteins not elsewhere classified

Ensembl:

ensembl_id ENSDARG00000060941

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00009562 False 3178 mRNA 0.53 17 32292564 32374156
TCONS_00009563 False 3162 mRNA 0.45 9 32323098 32361245
TCONS_00009564 True 1424 mRNA 0.49 2 32368574 32374156

Neighbor

gene id symbol gene type direction distance location
XLOC_004842 si:ch211-277e21.1 coding upstream 27395 32199651 ~ 32265169 (+)
XLOC_004841 NA coding upstream 105997 32170468 ~ 32186567 (+)
XLOC_004840 hlfb coding upstream 127337 32159272 ~ 32165227 (+)
XLOC_004839 stxbp4 coding upstream 146583 32073660 ~ 32145981 (+)
XLOC_004838 CR385040.2 coding upstream 222808 32020121 ~ 32069756 (+)
XLOC_004844 nog3 coding downstream 14704 32388860 ~ 32390444 (+)
XLOC_004845 CT573006.2 coding downstream 27928 32402084 ~ 32416844 (+)
XLOC_004846 NA coding downstream 57458 32431614 ~ 32526346 (+)
XLOC_004847 rbfox3a coding downstream 355314 32729470 ~ 33251465 (+)
XLOC_004848 BX936416.1 coding downstream 577626 32951782 ~ 32951896 (+)
XLOC_004837 dre-mir-2196 non-coding upstream 375512 31916943 ~ 31917052 (+)
XLOC_004836 CR450698.1 non-coding upstream 473959 31795031 ~ 31818605 (+)
XLOC_004830 NA non-coding upstream 661267 31608889 ~ 31631297 (+)
XLOC_004829 NA non-coding upstream 689049 31583376 ~ 31603515 (+)
XLOC_004850 NA non-coding downstream 966059 33340215 ~ 33343285 (+)
XLOC_004854 NA non-coding downstream 1221746 33595902 ~ 33606588 (+)

Expression


Co-expression Network