G150856


Basic Information

Item Value
gene id G150856
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 1724122 ~ 1739481 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU204260
GAATATACTCaagaaaaatgttgaagacaTCAAAACACGTGTGAGTCAAGCTTTATTTGATGCTACAGAGAAAGTCAAAAAACGAAGAGGAGACCTAGATATGTGGGTGAAGGAATTTTCCAGTTTGTTAAAAGATCAGCTAACATTCAACACCATCTGTTGTCAAAACTTCAGTGACATAAACAATTTTGACTTTCtaaaagaagagacagagaaaggccTTGTATCTGTCATAAAGGAAGTGAGCAGCCTCTCACTGGATAAGATGGAGGAATTCAGGATGAAGCCTGATCAAATCCTCATCGATCAGCTGTGTAACTGTTGCTGGGTAACGTGTCCATTCTGTGCAGCTGTTTGTACCAACACATTGGAAGATCACAGTCCTGATGACCACAGCGTGCCCTTTCATCGATCTGCTGCAGTCAATGGTTTTCactacagaaacacagagatacTGAGTGTTGATTTCTGCACAACAGATGTTGTGAGTGATGGAAGTTTTTACCCTGATCAAGATCCAGAA
>TU204261
ATTCAACTATTTTATACTTCATCTAATTTTAAATTATCTTTTTACTGCTACTTATCACTCCTACTACTACCATATTgggattgtttttgttgtttgcttaATTAGACTCCTGTTATTGCTACAATATATTGATATCCATAATTACTAACAGAAATATCAGTCTGTGTAAAAAATGggttattttcttttactgtaataaacagaGCCTTTTATAAAGTCATTGGTGTTTACACTTTTCTGTTATTAACGAGCAACAGACCAGATTTTCTATCCAGTTTGTTAAAAGATCAGCTAACATTCAACACCATCTGTTGTCAAAACTTCAGTGACATAAACAATTTTGACTTTCtaaaagaggagacagagaaaggcCTTGTATCTGTCATAAAGGAAGTGAGCAGCCTCTCACTGGATAAGATGGAGGAATTCAGGATGAAGCCTGATCAAATCCTCATCGATCAGCTGTGTAACTGTTGCTAGGTAACGTGTCCATTCTGTGCAGCTGTTTGTACCAACACATTGGAAGATCACAGTCCTGATGACCACAGCGTGCCCTTTCATCGATCTGCTGCAGTCAATGGTTTTCactacagaaacacagagatacTGAGTGTTGATTTCTGCACAACAGATGTTGTGAGTGATGGAAGTTTTTACCCTGATCAAGATCCAGAA

Function

GO: NA

KEGG:

id description
ko04622 RIG-I-like receptor signaling pathway
ko05168 Herpes simplex virus 1 infection

RNA

RNA id representative length rna type GC content exon number start site end site
TU204260 False 523 TUCP 0.41 2 1724122 1739481
TU204261 True 675 lncRNA 0.36 2 1724122 1737007

Neighbor

gene id symbol gene type direction distance location
LOC120574288 LOC108233705,LOC103393603 coding downstream 77053 1620674 ~ 1647069 (-)
LOC120573930 LOC103363959,LOC101479828,LOC102300806,LOC102197709 coding downstream 180712 1520386 ~ 1543410 (-)
LOC120574716 LOC102301616,LOC103363960,LOC100701445 coding downstream 215010 1500772 ~ 1509112 (-)
LOC120575499 NA coding downstream 278799 1429165 ~ 1445323 (-)
LOC120573831 hspa6,LOC100700083 coding downstream 327654 1392492 ~ 1396468 (-)
LOC120574768 LOC103358687,LOC104930242 coding upstream 265395 2004876 ~ 2058639 (-)
ilf3b ilf3,LOC102795819 coding upstream 425239 2164720 ~ 2209257 (-)
LOC120573916 LOC103358683,LOC104942087,LOC104930238,LOC103393647 coding upstream 475113 2214594 ~ 2224968 (-)
si:ch211-194b1.1 wiz,LOC107731472 coding upstream 615961 2355442 ~ 2433220 (-)
pglyrp6 NA coding upstream 698621 2438102 ~ 2450469 (-)
G150869 NA non-coding downstream 37919 1685477 ~ 1686203 (-)
G150865 NA non-coding downstream 84271 1639479 ~ 1639851 (-)
G150861 col1,LOC108233705 non-coding downstream 106451 1609820 ~ 1617671 (-)
LOC120574250 col1,LOC108233705 non-coding downstream 113658 1609660 ~ 1610464 (-)
G150855 NA non-coding downstream 134814 1588768 ~ 1589308 (-)
G150992 NA non-coding upstream 169935 1909416 ~ 2072683 (-)
G151006 NA non-coding upstream 261525 2001006 ~ 2001403 (-)
G151003 NA non-coding upstream 265708 2005189 ~ 2006310 (-)
G151007 NA non-coding upstream 268585 2008066 ~ 2009261 (-)
G151008 NA non-coding upstream 269451 2008932 ~ 2072784 (-)
LOC120574287 col1,LOC108233705,LOC103393603,LOC106536191 other downstream 103651 1606215 ~ 1620471 (-)
LOC120575421 LOC106675350 other downstream 258814 1461342 ~ 1465308 (-)
LOC120575422 LOC106675350 other downstream 263141 1456747 ~ 1460981 (-)
LOC120573832 maz,LOC101481851,LOC103375157,LOC102304652,LOC101067998,LOC105024369,LOC102195162 other downstream 402089 1302340 ~ 1322033 (-)
G150705 NA other downstream 484132 1238242 ~ 1239990 (-)
LOC120573867 LOC108236047,LOC107376309,LOC101475947,LOC100695382,LOC106520692,LOC105918010 other upstream 76584 1816065 ~ 1822128 (-)
LOC120573864 NA other upstream 106259 1845740 ~ 1872092 (-)
farsa farsa other upstream 393251 2132732 ~ 2161724 (-)
G151146 NA other upstream 660328 2399809 ~ 2805411 (-)
G151216 LOC106957010,LOC107376217,LOC103393680 other upstream 1134437 2873918 ~ 2896343 (-)

Expression


Co-expression Network