G150992


Basic Information

Item Value
gene id G150992
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 1909416 ~ 2072683 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU204453
cacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacacacacacacacacaacagatacacacacacacacacacacacacacacacacacacacacacacacacacacacagatacacacagatacacacacacacacacacacacacatacatacacacacacacacacacacacacacacacatacacacacacacacacagatacacacacacagatacacacacacacacacacacacacacacacacacacagatacatacacacacacacacacacacacacagatacacacacacagatacacacacacacacacacacacacacacacacacacacagatacacacacacagatacacacacacacacacacacacacagatacacacacacacacacatacacacacacacacacacacac
>TU204454
cacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacacacacacacacacaacagatacacacacacacacacacacacacacacacacacacacacacacacacacacacagatacacacagatacacacacacacacacacacacacacacacatacacacacacacacacacacac
>TU204456
cacagacagacacacacagagacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacactgagacacacacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacacacacacacacacacagatacacacacacacacacacaaagacagacacacacacagcaacacacagacacacacacacacacaacagcaacacacacacagacagacacacacacagacacacacacacacacagacacacacagacaaacacacacacacacacagacacacacacacagacagacacacacacacacacacacacacacacacacacacac
>TU204457
cacagacagacacacacagagacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacactgagacacacacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacacacacacacacacaacagatacacacacacacacacacacacacacacacacacacacacacacacacacacacagatacacacagatacacacacacacacacacacacacacacagatacacacacacacacacacacacacacacacacacacagatacatacacacacacacacacacacacacagatacacacacacagatacacacacacacacacagatacacacagatacacacacacacacacacacaaacacacaca
>TU204458
cacagacagacacacacagagacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacactgagacacacacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacacacacacacacacacagatacacacacacacacacacacacacacacacacacacacacacacacacacacacaacagatacacacacacacacacacacacacacacacacacacacacacacacacacacacagatacacacagatacacacacacacacacacacacacacacagatacacacacacacacacacacacacacacacacacacagatacatacacacacacacacacacacacacagatacacacacacagatacacacacacacacacacacacacacacacacacacacagatacacacacacagatacacacacacacacacacacacacagatacacacagatacacacacacacacacacacaaacacacaca
>TU204459
aaacacacactcacatacacacacacacacacagatacacacacacagatacacacacacacacacacacacacacacacacacacagatacatacacacacacacacacacacacacagatacacacacacagatacacacacacacacacacacacacacacacacacacacagatacacacacacagatacacacacacacacacacacacacacacacacacacacacacagacagacacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204453 True 560 lncRNA 0.47 2 1945565 1971635
TU204454 False 308 lncRNA 0.48 2 1945565 1971635
TU204456 False 390 lncRNA 0.49 4 1949270 2072683
TU204457 False 493 lncRNA 0.47 4 1971075 2072683
TU204458 False 557 lncRNA 0.47 3 1971075 2072683
TU204459 False 246 lncRNA 0.46 3 1909416 1982822

Neighbor

gene id symbol gene type direction distance location
LOC120574288 LOC108233705,LOC103393603 coding downstream 262347 1620674 ~ 1647069 (-)
LOC120573930 LOC103363959,LOC101479828,LOC102300806,LOC102197709 coding downstream 366006 1520386 ~ 1543410 (-)
LOC120574716 LOC102301616,LOC103363960,LOC100701445 coding downstream 400304 1500772 ~ 1509112 (-)
LOC120575499 NA coding downstream 464093 1429165 ~ 1445323 (-)
LOC120573831 hspa6,LOC100700083 coding downstream 512948 1392492 ~ 1396468 (-)
ilf3b ilf3,LOC102795819 coding upstream 92037 2164720 ~ 2209257 (-)
LOC120573916 LOC103358683,LOC104942087,LOC104930238,LOC103393647 coding upstream 141911 2214594 ~ 2224968 (-)
si:ch211-194b1.1 wiz,LOC107731472 coding upstream 282759 2355442 ~ 2433220 (-)
pglyrp6 NA coding upstream 365419 2438102 ~ 2450469 (-)
LOC120574080 gfi1,LOC102083319,LOC102796239,LOC103376798,LOC101077887 coding upstream 665252 2737935 ~ 2750253 (-)
G150858 NA non-coding downstream 65879 1590672 ~ 1843537 (-)
G150860 NA non-coding downstream 170565 1723700 ~ 1738851 (-)
G150863 NA non-coding downstream 170809 1589424 ~ 1738607 (-)
G150862 NA non-coding downstream 173133 1698862 ~ 1736283 (-)
G150869 NA non-coding downstream 223213 1685477 ~ 1686203 (-)
G151024 gcdh,LOC107718595,LOC107563244 non-coding upstream 41249 2113932 ~ 2119908 (-)
G151026 NA non-coding upstream 54467 2127150 ~ 2128852 (-)
G151030 NA non-coding upstream 137836 2210519 ~ 2212318 (-)
G151031 NA non-coding upstream 140272 2212955 ~ 2214142 (-)
G151033 NA non-coding upstream 152636 2225319 ~ 2225764 (-)
LOC120573864 NA other downstream 37324 1845740 ~ 1872092 (-)
LOC120573867 LOC108236047,LOC107376309,LOC101475947,LOC100695382,LOC106520692,LOC105918010 other downstream 87288 1816065 ~ 1822128 (-)
LOC120574289 NA other downstream 169491 1591689 ~ 1739925 (-)
G150856 NA other downstream 169935 1724122 ~ 1739481 (-)
LOC120574287 col1,LOC108233705,LOC103393603,LOC106536191 other downstream 288945 1606215 ~ 1620471 (-)
farsa farsa other upstream 60049 2132732 ~ 2161724 (-)
G151146 NA other upstream 327126 2399809 ~ 2805411 (-)
G151216 LOC106957010,LOC107376217,LOC103393680 other upstream 801235 2873918 ~ 2896343 (-)
G151227 LOC103393680 other upstream 838643 2911326 ~ 2915367 (-)
G151344 smarca4 other upstream 1239044 3311727 ~ 3316915 (-)

Expression


Co-expression Network