G151006


Basic Information

Item Value
gene id G151006
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 2001006 ~ 2001403 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU204493
ctagccccttaccctcaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgtctaaccttaacccttaccctaaccttaaccatcacaactaaatgtctaaccttaacccttaccctcaccctaaccataacctaattctatccctaatcctaaaaccaagtcttaaccctcaaacagccctttaaacttgtggggtccagcattttggccccacaaagctgtccggacc
>TU204494
ctagccccttaccctcaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgtctaaccttaacccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgtctaaccttaacccttaccctcaccctaaccataacctaattctatccctaatcctaaaaccaagtcttaaccctcaaacagccctttaaacttgtggggtccagcattttggccccacaaagctgtccggacc
>TU204495
ctagccccttaccctcaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgtctaaccttaacccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgtctaaccttaacccttaccctcaccctaaccataacctaattctatccctaatcctaaaaccaagtcttaaccctcaaacagccctttaaacttgtggggtccagcattttggccccacaaagctgtccggacc
>TU204496
ctagccccttaccctcaccttaaccatcacaactaaatgcctaaccttaacccttaccctaaccttaaccatcacaactaaatgtctaaccttaacccttaccctaaccttaaccatcacaactaaatgcctaaccttaacccttaccctcaccctaaccataacctaattctatccctaatcctaaaaccaagtcttaaccctcaaacagccctttaaacttgtggggtccagcattttggccccacaaagctgtccggacc

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
TU204493 False 263 lncRNA 0.44 2 2001006 2001403
TU204494 False 308 lncRNA 0.43 2 2001006 2001403
TU204495 True 353 lncRNA 0.43 2 2001006 2001403
TU204496 False 263 lncRNA 0.44 2 2001006 2001403

Neighbor

gene id symbol gene type direction distance location
LOC120574288 LOC108233705,LOC103393603 coding downstream 353937 1620674 ~ 1647069 (-)
LOC120573930 LOC103363959,LOC101479828,LOC102300806,LOC102197709 coding downstream 457596 1520386 ~ 1543410 (-)
LOC120574716 LOC102301616,LOC103363960,LOC100701445 coding downstream 491894 1500772 ~ 1509112 (-)
LOC120575499 NA coding downstream 555683 1429165 ~ 1445323 (-)
LOC120573831 hspa6,LOC100700083 coding downstream 604538 1392492 ~ 1396468 (-)
LOC120574768 LOC103358687,LOC104930242 coding upstream 3473 2004876 ~ 2058639 (-)
ilf3b ilf3,LOC102795819 coding upstream 163317 2164720 ~ 2209257 (-)
LOC120573916 LOC103358683,LOC104942087,LOC104930238,LOC103393647 coding upstream 213191 2214594 ~ 2224968 (-)
si:ch211-194b1.1 wiz,LOC107731472 coding upstream 354039 2355442 ~ 2433220 (-)
pglyrp6 NA coding upstream 436699 2438102 ~ 2450469 (-)
G150858 NA non-coding downstream 157469 1590672 ~ 1843537 (-)
G150860 NA non-coding downstream 262155 1723700 ~ 1738851 (-)
G150863 NA non-coding downstream 262399 1589424 ~ 1738607 (-)
G150862 NA non-coding downstream 264723 1698862 ~ 1736283 (-)
G150869 NA non-coding downstream 314803 1685477 ~ 1686203 (-)
G151003 NA non-coding upstream 3786 2005189 ~ 2006310 (-)
G151007 NA non-coding upstream 6663 2008066 ~ 2009261 (-)
G151008 NA non-coding upstream 7529 2008932 ~ 2072784 (-)
G150994 NA non-coding upstream 10573 2011976 ~ 2034999 (-)
G151004 NA non-coding upstream 29587 2030990 ~ 2141338 (-)
LOC120573864 NA other downstream 128914 1845740 ~ 1872092 (-)
LOC120573867 LOC108236047,LOC107376309,LOC101475947,LOC100695382,LOC106520692,LOC105918010 other downstream 178878 1816065 ~ 1822128 (-)
LOC120574289 NA other downstream 261081 1591689 ~ 1739925 (-)
farsa farsa other upstream 131329 2132732 ~ 2161724 (-)
G151146 NA other upstream 398406 2399809 ~ 2805411 (-)
G151216 LOC106957010,LOC107376217,LOC103393680 other upstream 872515 2873918 ~ 2896343 (-)
G151227 LOC103393680 other upstream 909923 2911326 ~ 2915367 (-)
G151344 smarca4 other upstream 1310324 3311727 ~ 3316915 (-)

Expression


Co-expression Network