G151024 (gcdh,LOC107718595,LOC107563244)


Basic Information

Item Value
gene id G151024
gene name gcdh,LOC107718595,LOC107563244
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 2113932 ~ 2119908 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU204524
GACCTTTTGGCAAACCATGCAGATATACAACAACATAGTGAGTGATGGAGCCAGAAACCCCCGTTtttattagagctgcaaagatcaattaatcaattagtcgtCTATTGTTAAATTAATCAACTAGTTTGATAATCGATGAATCAGTTTGAGTTATTTCttatgaaaataaatgtcacaattctctgatgtcagctctttaaatgtgaatattgttctagtgtcttctctcctctgggacaggaaactgaatgtctttgagttgtggacaaaacaagatgtgatgatgtcattttgggctttttgggaaactctgatccacatttttcaccattttctaatACTTTAGAGACcgaaacaactaatccattcatccagaaaataatccacacattaatcgcgttagttgcagccatggatcttaatataatatatatttgatattAACATACGtgaaacaaattgtattttgcttcaagtttaaaaacaaatgactGAGGAAGCTTGTTCACTGACTAAAAATGACTTCTTTTTCAGAGATGTGACCCAAAATCATAAAGAGTTTGTCATTCTTGTATCTCGATATGCTTTGATTTTGTGTAATATAATTATTTTCTGTGTGACCCttcctgttttcttttacaTCACAATACAATCTTGTCATCTGTGTACTTTTACACCAATTACACAATGACAAGATTAATTGGAACAAATCAGAAACGACACAAAGCTTCACATGCAATCCCAAAACAAGTGTAGTGCATTTATGCTGTTTTATGTTTCATAATAACAGTATCAACAATGGATTTGACTTTTTCTATACAACTCTGAGAAGAAATTTCTGAGTAAGAGTATCAAAAATAGCCCTTTTTAAGTTGAAAAATCAACTTCTGAATTAATTACACTTTGCAAAAGTCACCAAGTTCAGACACTTGCTTCTTTCTCTCACAATAAAGCACtcggatatatatatatatatatatatatatatgtgttctAGAAAGCTGATTGGTAACAAACAACGTCACTATACAGATGAGAATTTATTCTTCAAATCTTCAATCTTCAAACTGCAGCAGCGTTGACTCGTGACTCAGTATTTCTGAGAGCAGGTTTGTGTTGTTGGGGTCTATTTGTCCACAGTGAAGGCCTGCAGTCCTGTGATGGCTCGGCCCAGGATCAGAGCGTGGATATCGTGGGTACCTTCGTACGTGTTGACGGCCTCCAGGTTCATGACGTGGCGAATGATGTGGTACTCGTCGGCGATGCCGTTTCCTCCCAGCATGTCTCTGGCCTGCCTGGCGATGTCCAGGGCTTTACCGCAGCTGTTCCTCTTCAGCATGGAGATCATGTCCGGGGCCGCTCtTTTTGGCATCGATTAGTCTTCCCAGCTGCAGACAGGACTGTAGGCCGATGGTGATCTCAGTCAGCATGTCCGCCATCTTCTTCTGCATCAGCTGATTCCTTGCCAGCGGCACGCCAAACTGGATT

Function

symbol description
gcdh Enables glutaryl-CoA dehydrogenase activity. Involved in fatty acid beta-oxidation using acyl-CoA dehydrogenase. Located in mitochondrion. Implicated in glutaric acidemia I.

NR:

description
PREDICTED: glutaryl-CoA dehydrogenase, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204524 True 1491 lncRNA 0.39 4 2113932 2119908

Neighbor

gene id symbol gene type direction distance location
LOC120574768 LOC103358687,LOC104930242 coding downstream 55293 2004876 ~ 2058639 (-)
LOC120574288 LOC108233705,LOC103393603 coding downstream 466863 1620674 ~ 1647069 (-)
LOC120573930 LOC103363959,LOC101479828,LOC102300806,LOC102197709 coding downstream 570522 1520386 ~ 1543410 (-)
LOC120574716 LOC102301616,LOC103363960,LOC100701445 coding downstream 604820 1500772 ~ 1509112 (-)
LOC120575499 NA coding downstream 668609 1429165 ~ 1445323 (-)
ilf3b ilf3,LOC102795819 coding upstream 44812 2164720 ~ 2209257 (-)
LOC120573916 LOC103358683,LOC104942087,LOC104930238,LOC103393647 coding upstream 94686 2214594 ~ 2224968 (-)
si:ch211-194b1.1 wiz,LOC107731472 coding upstream 235534 2355442 ~ 2433220 (-)
pglyrp6 NA coding upstream 318194 2438102 ~ 2450469 (-)
LOC120574080 gfi1,LOC102083319,LOC102796239,LOC103376798,LOC101077887 coding upstream 618027 2737935 ~ 2750253 (-)
G151008 NA non-coding downstream 41148 2008932 ~ 2072784 (-)
G150992 NA non-coding downstream 41249 1909416 ~ 2072683 (-)
G151005 NA non-coding downstream 46286 2066706 ~ 2067646 (-)
G150994 NA non-coding downstream 78933 2011976 ~ 2034999 (-)
G151007 NA non-coding downstream 104671 2008066 ~ 2009261 (-)
G151026 NA non-coding upstream 7242 2127150 ~ 2128852 (-)
G151030 NA non-coding upstream 90611 2210519 ~ 2212318 (-)
G151031 NA non-coding upstream 93047 2212955 ~ 2214142 (-)
G151033 NA non-coding upstream 105411 2225319 ~ 2225764 (-)
G151034 LOC106674584,LOC106674915,LOC106675207,LOC106675343,LOC106676464,LOC106676424,LOC106675739 non-coding upstream 119239 2239147 ~ 2239811 (-)
LOC120573864 NA other downstream 241840 1845740 ~ 1872092 (-)
LOC120573867 LOC108236047,LOC107376309,LOC101475947,LOC100695382,LOC106520692,LOC105918010 other downstream 291804 1816065 ~ 1822128 (-)
LOC120574289 NA other downstream 374007 1591689 ~ 1739925 (-)
farsa farsa other upstream 12824 2132732 ~ 2161724 (-)
G151146 NA other upstream 279901 2399809 ~ 2805411 (-)
G151216 LOC106957010,LOC107376217,LOC103393680 other upstream 754010 2873918 ~ 2896343 (-)
G151227 LOC103393680 other upstream 791418 2911326 ~ 2915367 (-)
G151344 smarca4 other upstream 1191819 3311727 ~ 3316915 (-)

Expression


Co-expression Network