G151194


Basic Information

Item Value
gene id G151194
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 2637774 ~ 2929497 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU204845
ggacaacaggagggttaataaATAAGACCCTCTGAAAATAAAGACGAGTATGAGACCCTGATAAAGACACAAGTAGACAACGTGTAGCAGTTTAGAAAGCCTCTTTAATTATTGATACCAACATTTCACAACATGATTTCCACTCCAGAGGTGCAGACAGAAACATTACACAAGAATTGAGGAGATGCAGTTTCTTTTGGGGATTTCCTTTGCTTCTTAAGTGCGAAACAGCGACACGTTAAATCTGTGAGCTGTTATTCTTAACAACACATTCCTCTCACTTCCCAGCAGTGTGAGCCGTAAGCAGCCCCCAGAGCAGCCTGCGAGCGGTTTTCCAGCGTCCCGACACAAAGAGCGTGTATCTCTAAAAGAAGTGTCCAGCTGATAGGTGTGGTCACATGTCGACTCGGCTCTATACGAAGCCCTTGGAGCCAGAGAAAGGGAAGAAGCCCACTCAACAAGTCGTGCTCGGAGAATACAGTGTGTGCAGTGAGTAATAGAGAGACTACCCTGCCACCCAGTTTCAACTTTATCTtgaacataaacaaaaaaacaatgaaaagtgatgaatgtaaataatcaatgcacatcccaaaaaaaaaaaagccaaccaACCCTGCCCGGTAGAACTCAGCTGCGTTTAAGGCCGCCTtgaggcgctgacacaccaacctgattatcggccgtcggacagtctggcgaggtcggtgactcgagtctgttcggtgcgttttatttgggccgatttgacttgttgaaatcGGTGGGTGGGcggtcggactcaatgaccaattactggaaatggcgagcgggatgagcgtgactagagtctctcaaaatctgatgaaaatcttttaaacggacctttgttgatctgaaatgaaagattcaggagctgcacggcctatttctctcttaaaatgtttgcaGAAACACTGttttagtaaaatatgagatcagaTTCGTAACGAGACGCCATGATGGTTGgatttgaaattcgggagcagccagacccatgtgacgcgttcgtccaatcagctgccggttttcattttttgggcgacaatacagagtagcgccgcctgctgctatggagacgtatcaGgtctcgtctcttcggtgtgttctgaggaactttctggaccaactcggggagactgatcagcccgactggctttactgccgtctgattggccgtctggttggtgtgt
>TU204847
TACGGACCTGTTTGACCAGTGACCTCTTCTTCTCCTCGCCCATCTCGTCGCGGCCCGCCAGGTCTCTCTCGTACTGGGCCTTCATGGCCTGCATGTTGACCTCCAGACGCAGCTTGGCGTCCTCGGTGGCCTGCAGCTcgtcctccagctcctccagctGAGTCTTCATCTCCTCCAGCTGCTGCTCCATCGCACGCTTGGACTTCTCCAGCTCGTGGACACTCTTGCCAACGTCGTCCTTAGAGGATACCAGGTCCTCCATTTCAGCCCGCAGCAGTTTGTTGTTGCGGTCCAATTCCTCCTTGGTGTCCATCAGAGAGTCCAGCTCACGGGTTAACGCCAGCGCCCGGGTGTCCTTCTCACGGGCCTCGGCTTCAGCCCGGTCACGCTCCTCTGCATAGCGGGCAGAAATGGTTTTCTCCTCTGCCAGCATctggtcaaacttcttctgcttcttctccAGGTTGGAGACTATCTGTCGGAGGTGGTCCTGGTCTACCAGCAGGTCGTCCAACTCTTGCTGGACACGAGTCTTGGTTTTGTCCAACTTCTCAAAGGCAGAACACTTCTCCTCCAGACGCAGGCTCATCGCCTCCAGGTCCCGCTGAAGCCTCTTCTTCCCCTCCTCAGCAGCCTCCAGACAGCCAGAGTCCTGCTCCACCTTCTTCTTCATTTCAAGAAGCTGAGCCTGAACAGTTTGCAGCTGCTTCTCCACATTTCTCTttgcctcttcctcttcctccagctGTTCCCTCAGGTTGTTCTGTTCGTCCTCCAGCTGGCGCAGACGTGTGCTGTTGGCCAGTTTCTGCCGTGTCTCCTCCTGGAGCAG
>TU204848
ggacaacaggagggttaataaATAAGACCCTCTGAAAATAAAGACGAGTATGAGACCCTGATAAAGACACAAGTAGACAACGTGTAGCAGTTTAGAAAGCCTCTTTAATTATTGATACCAACATTTCACAACATGATTTCCACTCCAGAGGTGCAGACAGAAACATTACACAAGAATTGAGGAGATGCAGTTTCTTTTGGGGATTTCCTTTGCTTCTTAAGTGCGAAACAGCGACACGTTAAATCTGTGAGCTGTTATTCTTAACAACACATTCCTCTCACTTCCCAGCAGTGTGAGCCGTAAGCAGCCCCCAGAGCAGCCTGCGAGCGGTTTTCCAGCGTCCCGACACAAAGAGCGTGTATCTCTAAAAGAAGTGTCCAGCTGATAGGTGTGGTCACATGTCGACTCGGCTCTATACGAAGCCCTTGGAGCCAGAGAAAGGGAAGAAGCCCACTCAACAAGTCGTGCTCGGAGAATACAGTGTGTGCAGTGAGTAATAGAGAGACTACCCTGCCACCCAGTTTCAACTTTATCTtgaacataaacaaaaaaacaatgaaaagtgatgaatgtaaataatcaatgcacatcccaaaaaaaaaaaagccaaccaACCCTGCCCGGTAGAACTCAGCTGCGTTTAAGGCCGCCTtgaggcgctgacacaccaacctgattatcggccgtcggacagtctggcgaggtcggtgactcgagtctgttcggtgcgttttatttgggccgatttgacttgttgaaatcGGTGGGTGGGcggtcggactcaatgaccaattactggaaatggcgagcgggatgagcgtgactagagtctctcaaaatctgatgaaaatcttttaaacggacctttgttgatctgaaatgaaagattcaggagctgcacggcctatttctctcttaaaatgtttgcaGAAACACTGttttagtaaaatatgagatcagaTTCGTAACGAGACGCCATGATGGTTGgatttgaaattcgggagcagccagacccatgtgacgcgttcgtccaatcagctgccggttttcattttttgggcgacaatacagagtagcgccgcctgctgctatggagacgtatcaGGTCTCGTGTCTTCGGtgagttctgaggaactttctggaccaactcggggagaccgatCAGCCCGACTGGCTTTACTGCCGTCTGAttggccgtctggtcggtgtgtcagagcctttagttCGTGTCGGCAGTCGGTGCACTTACTAAACTAAACGATCACGTGCTTTCCAAAACTCCCAAGCTTCTCCGTCAATGTTTCAAtgaaacacacaaatgcagtgGTTTATAATGTCTAagctgaagtgttttttttttttatttccatctcAGTGCAAAAATTAAGAAATTTCAGCACAGTCACAATCAAATGCTTTCAGTATGCGCCAGTGAGAAGTCTCCGATTGTGTCGCTTCGAAATCTGCCTCCAATTTTGTTTCACCGTTACATTTTGAAGCCCTAAAGCGTAGTCACGAGTACTAACTGCAGCTAAATCGATTATCGAGTACATTTCCGCTTATAAAGCTTCATTATAATCTGAAGCGAAAGCATAACAAACACGAAGCCCTTCAATTCTGAACATTATAAAAACTTCTGCATAAAATACAACTCCATAGATTGAGATATTACTTTGGTCCCCTTCCAGTAATCGTTCTTCATTTATGTAtacttcttttctttgtttcctcCTTCTTCAATTAGAAAAATAGATCCTAAAATCAGGACTATCATAATTTGAACGTTTCCTTACAAaaatatcattttatttttttttcccagagaACGAAAAAAATGAAGCAAACGAAAAAAATTTGGCCCAAaaataacgtgtgtgtgtgtttgtcagcatGGTGATTGTCCCGAGTTTACtggcttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgccccCACAAAGCTCTGCCGTGCAGACAGCAGAGGAACAGAAGAAAGTAGCTGCAGCTtcaccaaaatgaagactgaaaaacaactATTTTGGCATAAACCTTTACCGACATGTGGCTGATAGCCCTCTGAGAAATACCCACATTTGGCGCTCGACGAGTGGTAGTTTCGGACTCGGAGTTAATGCATAATTTCTTTACTAATACTCAGCCACACAGCTAGTCATACTGGAAGTCAGTAGGGCGTGCGGTGCAAGCATACCAGAGTGTGTTTGCTTCCCTGAGCGCAAACACAATGATGTGCCATCTAACAGAGCAAACACAAATTGCACTGACAAAGCAGACTTATGTATGTAGGTGTGCAACGACACGGCATGGTTAGACATGACGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204845 False 1211 lncRNA 0.47 2 2637774 2929497
TU204847 False 832 lncRNA 0.58 4 2917711 2920158
TU204848 True 2378 lncRNA 0.44 2 2876964 2929497

Neighbor

gene id symbol gene type direction distance location
pglyrp6 NA coding downstream 187305 2438102 ~ 2450469 (-)
si:ch211-194b1.1 wiz,LOC107731472 coding downstream 204554 2355442 ~ 2433220 (-)
LOC120573916 LOC103358683,LOC104942087,LOC104930238,LOC103393647 coding downstream 412806 2214594 ~ 2224968 (-)
ilf3b ilf3,LOC102795819 coding downstream 428517 2164720 ~ 2209257 (-)
LOC120574768 LOC103358687,LOC104930242 coding downstream 579135 2004876 ~ 2058639 (-)
trir csgr03h19orf43,clg4h19orf43,LOC103154935,LOC107087651,LOC103376077,LOC102224489 coding upstream 70153 2999650 ~ 3003392 (-)
hook2 LOC103364969 coding upstream 78592 3008089 ~ 3035012 (-)
rtbdn rtbdn,LOC103364965 coding upstream 191188 3120685 ~ 3141710 (-)
s1pr5a s1pr5,LOC103393734,LOC104952115 coding upstream 473503 3403000 ~ 3407242 (-)
si:dkeyp-69e1.8 NA coding upstream 588427 3517924 ~ 3527374 (-)
G151170 NA non-coding downstream 56280 2483290 ~ 2581494 (-)
G151181 NA non-coding downstream 69615 2567787 ~ 2568159 (-)
G151179 NA non-coding downstream 70171 2547715 ~ 2567603 (-)
G151177 NA non-coding downstream 120758 2516737 ~ 2517016 (-)
G151147 NA non-coding downstream 136784 2441224 ~ 2500990 (-)
G151195 NA non-coding upstream 12784 2942281 ~ 2944617 (-)
G151261 NA non-coding upstream 19588 2949085 ~ 2949619 (-)
G151275 NA non-coding upstream 40457 2969954 ~ 2970309 (-)
G151282 NA non-coding upstream 56596 2986093 ~ 2986852 (-)
G151286 NA non-coding upstream 110482 3039979 ~ 3040406 (-)
farsa farsa other downstream 476050 2132732 ~ 2161724 (-)
LOC120573864 NA other downstream 765682 1845740 ~ 1872092 (-)
LOC120573867 LOC108236047,LOC107376309,LOC101475947,LOC100695382,LOC106520692,LOC105918010 other downstream 815646 1816065 ~ 1822128 (-)
G150856 NA other downstream 898293 1724122 ~ 1739481 (-)
LOC120574287 col1,LOC108233705,LOC103393603,LOC106536191 other downstream 1017303 1606215 ~ 1620471 (-)
G151344 smarca4 other upstream 382230 3311727 ~ 3316915 (-)
LOC120575464 NA other upstream 1432351 4361848 ~ 4367343 (-)
LOC120575466 LOC102292836,LOC101471904,LOC100692969,LOC103393382,LOC103468414,LOC102212070,LOC103143659,LOC102784177 other upstream 1486680 4416177 ~ 4464991 (-)
LOC120574081 grin2b,fmc1,LOC102794452,LOC102794917 other upstream 1655676 4585173 ~ 4765493 (-)
G152043 cdc42ep1,LOC102301584,LOC102206375,LOC102078793 other upstream 2248819 5178316 ~ 5227241 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G1114628 NA non-coding NC_048576.1 CM023230.2 77560855 ~ 77562870 (-)