G151316


Basic Information

Item Value
gene id G151316
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 3146450 ~ 3147624 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU205032
AAAAGGAAGCTGAGACTGACTGACTTCTGCTCGCTCTATTATTGAGCGCTGTCTGGAAAGTTTGCACTGCAGGCAGGAGACGGAGACCTTGTTCCTTCTGCCAATCCTCCACAGGTGTTATTGACGTACTCTGGCACCCAAGTAGAGCCTGAGGATTTGACGTGTGCAAACAAGGCCGAGTAGATAAAGAAGCACACGGCAAGAAGACAAAACAAGTGTTCTGAGCTTCAACAGGAAGGACGCCATCTCTCCTGAGATCCTGAGAGACACACGGGAGTGCTGACATTTCAATTCCTCAAACACTTGCAGGAATTTTAAAAAGGAGCAGTGCGTGTCCGAGCAGCAGGTAATGGAGCCCATCGTTCAGACAGCCGAGGCAGCAGACGCTCAGATACAGAGGCAAGGCTGGAGGTGTGTGGCGAAGCGGGGAGCCGCCTCGCAGTTTGTGGCGAGCGCCATCGTAGTCTTGTCCACTTATTCTGTTGCTACCCTGGCTATGAGCTTAGGGAGGAACATTCAGGAACGAAGATTAAGACCAAATGGCAACTAGCAACAAACAAAGCCTCGTCAAAGATCTGAACCTCTTCTCTCCTAACAACATGACAGGAAGAGAGATGGAATGGACAGAACGTTTTTTGTGCCTCAACTCAAATGGGGTCACTTCAAATCATTTCAACTTTATGCTGTGaggatgtgaaaagaaaaagtaaatctGAAAAGTCAAGTCAGACTCATTTTTACCAAGAAGAACATGTCATTTAGAGTATGTGTTTTACATGAAATGAGCTATATAGATTATTAATAATGATTGGGCATGAATACTTTGTATGCAGTGCTGCTCTGAGGCCACAGGGTGGAGAACTGGGACTTCCTCACTTCATTTTGGATTTCCAACAACGAACCAGCTCAACAAGACAGGACAGAGACTTTATTGAACAACCCAATGCATTGGACAGATTGGATCTGTGACCGTTATGTGATATATTAACTACAAATAGAGTTTTGAATATTTAGATGCTTTTTTCTGTcataaaatgttcttttaattaaaagaaaatgtgggTGAAAAATGTCATATTGCTTGAATGTCCATCAGCTGATTGTACAGAAAAGatattttccacaaaaaaaataatcaatgttGAATTGAAACACTGACTTCAAATAAATGGTGA

Function

GO: NA

KEGG:

id description
ko04744 Phototransduction

RNA

RNA id representative length rna type GC content exon number start site end site
TU205032 True 1175 lncRNA 0.43 1 3146450 3147624

Neighbor

gene id symbol gene type direction distance location
rtbdn rtbdn,LOC103364965 coding downstream 4740 3120685 ~ 3141710 (-)
hook2 LOC103364969 coding downstream 111438 3008089 ~ 3035012 (-)
trir csgr03h19orf43,clg4h19orf43,LOC103154935,LOC107087651,LOC103376077,LOC102224489 coding downstream 143058 2999650 ~ 3003392 (-)
LOC120574018 NA coding downstream 303637 2840433 ~ 2842813 (-)
si:ch211-106h11.3 LOC103375031 coding downstream 326129 2801382 ~ 2820321 (-)
s1pr5a s1pr5,LOC103393734,LOC104952115 coding upstream 255376 3403000 ~ 3407242 (-)
si:dkeyp-69e1.8 NA coding upstream 370300 3517924 ~ 3527374 (-)
hmgxb4a hmgxb4,LOC102782297 coding upstream 381842 3529466 ~ 3541172 (-)
ankrd54 ankrd54 coding upstream 395400 3543024 ~ 3549032 (-)
foxred2 foxred2 coding upstream 401603 3549227 ~ 3561807 (-)
G151289 NA non-coding downstream 96202 3050011 ~ 3050248 (-)
G151287 NA non-coding downstream 102515 3043670 ~ 3043935 (-)
G151286 NA non-coding downstream 106044 3039979 ~ 3040406 (-)
G151282 NA non-coding downstream 159598 2986093 ~ 2986852 (-)
G151275 NA non-coding downstream 176141 2969954 ~ 2970309 (-)
G151337 NA non-coding upstream 58887 3206511 ~ 3207040 (-)
G151347 NA non-coding upstream 105384 3253008 ~ 3261883 (-)
G151346 NA non-coding upstream 128204 3275828 ~ 3315788 (-)
G151374 NA non-coding upstream 170480 3318104 ~ 3321853 (-)
G151375 NA non-coding upstream 174569 3322193 ~ 3322479 (-)
G151227 LOC103393680 other downstream 231083 2911326 ~ 2915367 (-)
G151216 LOC106957010,LOC107376217,LOC103393680 other downstream 250107 2873918 ~ 2896343 (-)
G151146 NA other downstream 341039 2399809 ~ 2805411 (-)
farsa farsa other downstream 984726 2132732 ~ 2161724 (-)
LOC120573864 NA other downstream 1274358 1845740 ~ 1872092 (-)
G151344 smarca4 other upstream 164103 3311727 ~ 3316915 (-)
LOC120575464 NA other upstream 1214224 4361848 ~ 4367343 (-)
LOC120575466 LOC102292836,LOC101471904,LOC100692969,LOC103393382,LOC103468414,LOC102212070,LOC103143659,LOC102784177 other upstream 1268553 4416177 ~ 4464991 (-)
LOC120574081 grin2b,fmc1,LOC102794452,LOC102794917 other upstream 1437549 4585173 ~ 4765493 (-)
G152043 cdc42ep1,LOC102301584,LOC102206375,LOC102078793 other upstream 2030692 5178316 ~ 5227241 (-)

Expression


Co-expression Network