G151399 (kri1,LOC102780649)


Basic Information

Item Value
gene id G151399
gene name kri1,LOC102780649
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 3375879 ~ 3380665 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU205149
cggatttcactcattttggccggatatccgttgccttgggcttcctttgtgttggcgttctaacctccggtggatttgtgaggactatggttaactgctcctcagatctctgcagggtaaatccagacagctagctagactatctgtccaatctcagttttctgttgcacgactaaataCAGACTTCAAAATCGTCTGATTTAATGTCGTTTTGGACCCCACGACGACTAGCTCGTCGTTCAggcgtcagctaatggggatccttaaaATAAACTTTACTGACACTTACGTGGATCAAACACAGGCTTGTTTTTGGTGATGACTTCTGCAAAGTGagactttttcttcttcttgcccGACTGTGGCAAATCctctttcttcatcttcttgcgctcctttttcttcttcttcttggagGCGGTGTGCTGGTTCGGGTCGTAGTCCGCATCCATAATGAAGTTTTCATCTTCACAGTGGGCCCCAGAGGCGTCATACTCCTGCTCCTCTTCATCGCCGTCTTCCTCTCGTTCCTCTCCGGTCCACGTGTCCCAGTTCCAGTGCTCGTCAAGCTCATCATCATCAAACTGAGGCttcccctcctcttcttctccgtaGTATTCGTTCCCAAAGAACTTctgcatgAGCTGATCGTGTTGCTGTGGATCGAAGTCTCCCTCCAGGTCAGTCTGACTGAAGGCGAGCTGCTCGTTGCCGGTCAGCTCCTGGAGCTTCTTTAGCTTCTCCATGATCTCGTTGCGCTTCAGGTTCTTCAGCTGCTTCAGCTGCTCCCGCTTCTGCTCTTTCTCCTGAAATCAGTTGTTGGGGAAAGGGAGCAAAAAGGAAAAGCAGAGAGAAAGGTGGGTTTATATTAGCTAACGaacaaagtagggctgggcaatagatcaatattatattacatcgatatacagtggcttgcataagtttaaacacccatgctaaagttgactaaaaagagg

Function

symbol description
kri1 Acts upstream of or within definitive hemopoiesis and ribosome biogenesis. Predicted to be part of 90S preribosome. Predicted to be active in nucleolus. Is expressed in eye; immature eye; and somite. Orthologous to human KRI1 (KRI1 homolog).

NR:

description
PREDICTED: protein KRI1 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU205149 True 977 lncRNA 0.47 4 3375879 3380665

Neighbor

gene id symbol gene type direction distance location
rtbdn rtbdn,LOC103364965 coding downstream 234169 3120685 ~ 3141710 (-)
hook2 LOC103364969 coding downstream 340867 3008089 ~ 3035012 (-)
trir csgr03h19orf43,clg4h19orf43,LOC103154935,LOC107087651,LOC103376077,LOC102224489 coding downstream 372487 2999650 ~ 3003392 (-)
LOC120574018 NA coding downstream 533066 2840433 ~ 2842813 (-)
si:ch211-106h11.3 LOC103375031 coding downstream 555558 2801382 ~ 2820321 (-)
s1pr5a s1pr5,LOC103393734,LOC104952115 coding upstream 22335 3403000 ~ 3407242 (-)
si:dkeyp-69e1.8 NA coding upstream 137259 3517924 ~ 3527374 (-)
hmgxb4a hmgxb4,LOC102782297 coding upstream 148801 3529466 ~ 3541172 (-)
ankrd54 ankrd54 coding upstream 162359 3543024 ~ 3549032 (-)
foxred2 foxred2 coding upstream 168562 3549227 ~ 3561807 (-)
G151376 NA non-coding downstream 48512 3327144 ~ 3327367 (-)
G151375 NA non-coding downstream 53400 3322193 ~ 3322479 (-)
G151374 NA non-coding downstream 54026 3318104 ~ 3321853 (-)
G151346 NA non-coding downstream 60091 3275828 ~ 3315788 (-)
G151347 NA non-coding downstream 113996 3253008 ~ 3261883 (-)
G151515 NA non-coding upstream 141687 3522352 ~ 3522790 (-)
G151521 NA non-coding upstream 228491 3609156 ~ 3651267 (-)
G151561 NA non-coding upstream 583383 3964048 ~ 3964411 (-)
G151615 NA non-coding upstream 674549 4055214 ~ 4112189 (-)
G151633 NA non-coding upstream 702253 4082918 ~ 4083681 (-)
G151344 smarca4 other downstream 58964 3311727 ~ 3316915 (-)
G151227 LOC103393680 other downstream 460512 2911326 ~ 2915367 (-)
G151216 LOC106957010,LOC107376217,LOC103393680 other downstream 479536 2873918 ~ 2896343 (-)
G151146 NA other downstream 570468 2399809 ~ 2805411 (-)
farsa farsa other downstream 1214155 2132732 ~ 2161724 (-)
LOC120575464 NA other upstream 981183 4361848 ~ 4367343 (-)
LOC120575466 LOC102292836,LOC101471904,LOC100692969,LOC103393382,LOC103468414,LOC102212070,LOC103143659,LOC102784177 other upstream 1035512 4416177 ~ 4464991 (-)
LOC120574081 grin2b,fmc1,LOC102794452,LOC102794917 other upstream 1204508 4585173 ~ 4765493 (-)
G152043 cdc42ep1,LOC102301584,LOC102206375,LOC102078793 other upstream 1797651 5178316 ~ 5227241 (-)
G152114 rbx1 other upstream 2081181 5461846 ~ 5464418 (-)

Expression


Co-expression Network