G151783


Basic Information

Item Value
gene id G151783
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 4411516 ~ 4413160 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU205640
CTTTTATTGACAACACCAGCATGTGTAGAAAGTCATTAGAGGATGGATTCCTGGAAAGAAACATATCTtgtacacacagaaaacacagtttcttttttttcttcagtgcaGCAACAGAAGCCAGCCACTGTAATGTAACTTTGAATATGGAGATGTTAATCAGTGATGGCACGAGCCTCCCACGGTGCTGACAGGTTTCGTGTTCTACCCTCTTCCTGTCTTGTCTCATCTCATCTggtctcccttcctctcctcctttcctctctctctctctctctctctctctcctctctgctgccTCTGCTCCAGCTCAGCAGTTTAGCACTCTCAGAGTGACAGTTTCACTCCTCCTCTATCACCTCAGTGCTATTATATACTGTGTtagggcaacacacacacacacacacacacacttcttctttcttctctctctctctctctctcttttctactAAGCATTTGTGATGTGGATTTCCCTCCAGAAGAAAGCTTGACTGTCTGAAGCCATCCGGCCTCCATGAAGACATCGAGCAGTGAGTCGCTCTACTGAagctcctctctttctttctttctttctttttaggaTAGAGGAGGTTACATCCTACTGCTGGCCCAGTTGAACCCCAACCCATTTCTTATAACActaaatgaaaatattttcCATTTGCACAAGaaaattaaacctttttttggTTTCAGATTGTGTACAGATTAGTGCCTGAATAGGGTCTCCCTCattcagcggtggaagaagtgtTCAGAtcattacttaagtaaaagtactaataccacactgtaaaaatactctgttacaagtaaaagtatgtattatcaggaaaatgtacttaaagtattaaaagtacaagtactcgATGCGGAAAAAAagcctcacattttagtaagtGGAAAGGATCCAAACTGTTGTGTCAGTCAACCAAGTGTTTAAtgagctaatcatttcagctgtaggcctgggtagtttaatttatacacAAACAtagtgtattttataaactacatgtgttttgtgtgcaacaatcttaatttgtaaagtaactagtaactaaagctgtcagattaatgtagtgaaaaagtatttccctctgaaatgcagCGGAGTAGAAGAAAGTGgcacgaaaagaaaagactcaagtaaattCCTCATTTGTACCTAAggacagtacttaagtaaatgtacttagttacattccacaacTGTGctcattttagttattttttagtgtttttaagtatatatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaaaatgatGTGAATCAGTAATCCTCATAGGGTTCCGTGTAGTTGGTGGTCTGCGGCCGAGGAATGGTGTAATCTTTGTTGTGGTCGATGTTCTGAAACACACGCAGAAACACGGAATCACagcttcatctggtcagtgcAGTCAACAGCCCTTATGATGATCTGTGCTTTCATTAACCTTACAATATGACGGAGTCATAATTGCCTGCAGTAGTGAAAGGTCACGGCCCTTAATTGCAGAGCATGATGTGAAGTCAGATTATTAATCCTAAAATGGGTTATTACTCACTGTCACGGCGAATCCAG
>TU205642
CTTTTATTGACAACACCAGCATGTGTAGAAAGTCATTAGAGGATGGATTCCTGGAAAGAAACATATCTtgtacacacagaaaacacagtttcttttttttcttcagtgcaGCAACAGAAGCCAGCCACTGTAATGTAACTTTGAATATGGAGATGTTAATCAGTGATGGCACGAGCCTCCCACGGTGCTGACAGGTTTCGTGTTCTACCCTCTTCCTGTCTTGTCTCATCTCATCTggtctcccttcctctcctcctttcctctctctctctctctctctctctctcctctctgctgccTCTGCTCCAGCTCAGCAGTTTAGCACTCTCAGAGTGACAGTTTCACTCCTCCTCTATCACCTCAGTGCTATTATATACTGTGTtagggcaacacacacacacacacacacacacttcttctttcttctctctctctctctctctcttttctactAAGCATTTGTGATGTGGATTTCCCTCCAGAAGAAAGCTTGACTGTCTGAAGCCATCCGGCCTCCATGAAGACATCGAGCAGTGAGTCGCTCTACTGAagctcctctctttctttctttctttctttttaggaTAGAGGAGGTTACATCCTACTGCTGGCCCAGTTGAACCCCAACCCATTTCTTATAACActaaatgaaaatattttcCATTTGCACAAGaaaattaaacctttttttggTTTCAGATTGTGTACAGATTAGTGCCTGAATAGGGTCTCCCTCattcagcggtggaagaagtgtTCAGAtcattacttaagtaaaagtactaataccacactgtaaaaatactctgttacaagtaaaagtatgtattatcaggaaaatgtacttaaagtattaaaagtacaagtactcgATGCGGAAAAAAagcctcacattttagtaagtGGAAAGGATCCAAACTGTTGTGTCAGTCAACCAAGTGTTTAAtgagctaatcatttcagctgtaggcctgggtagtttaatttatacacAAACAtagtgtattttataaactacatgtgttttgtgtgcaacaatcttaatttgtaaagtaactagtaactaaagctgtcagattaatgtagtgaaaaagtatttccctctgaaatgcagCGGAGTAGAAGAAAGTGgcacgaaaagaaaagactcaagtaaattCCTCATTTGTACCTAAggacagtacttaagtaaatgtacttagttacattccacaacTGTGctcattttagttattttttagtgtttttaagtatatatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaaaatgatGTGAATCAGTAATCCTCATAGGGTTCCGTGTAGTTGGTGGTCTGCGGCCGAGGAATGGTGTAATCTTTGTTGTGGTCGATGTTCTGAAACACACGCAGAAACACGGAATCACagcttcatctggtcagtgcAGTCAACAGCCCTTATGATGATCTGTGCTTTCATTAACCTTACAATATGACGGAGTCATAATTGCCTGCAGTAGTGAAAGGTCACGGCCCTTAATTGCAGAGCATGATGTGAAGTCAGATTATTAATCCTAAAATGGGTTATTACTCACTGTCACGGCGAATCCAG
>TU205643
CTTTTATTGACAACACCAGCATGTGTAGAAAGTCATTAGAGGATGGATTCCTGGAAAGAAACATATCTtgtacacacagaaaacacagtttcttttttttcttcagtgcaGCAACAGAAGCCAGCCACTGTAATGTAACTTTGAATATGGAGATGTTAATCAGTGATGGCACGAGCCTCCCACGGTGCTGACAGGTTTCGTGTTCTACCCTCTTCCTGTCTTGTCTCATCTCATCTggtctcccttcctctcctcctttcctctctctctctctctctctctctctcctctctgctgccTCTGCTCCAGCTCAGCAGTTTAGCACTCTCAGAGTGACAGTTTCACTCCTCCTCTATCACCTCAGTGCTATTATATACTGTGTtagggcaacacacacacacacacacacacacttcttctttcttctctctctctctctctctcttttctactAAGCATTTGTGATGTGGATTTCCCTCCAGAAGAAAGCTTGACTGTCTGAAGCCATCCGGCCTCCATGAAGACATCGAGCAGTGAGTCGCTCTACTGAagctcctctctttctttctttctttctttttaggaTAGAGGAGGTTACATCCTACTGCTGGCCCAGTTGAACCCCAACCCATTTCTTATAACActaaatgaaaatattttcCATTTGCACAAGaaaattaaacctttttttggTTTCAGATTGTGTACAGATTAGTGCCTGAATAGGGTCTCCCTCattcagcggtggaagaagtgtTCAGAtcattacttaagtaaaagtactaataccacactgtaaaaatactctgttacaagtaaaagtatgtattatcaggaaaatgtacttaaagtattaaaagtacaagtactcgATGCGGAAAAAAagcctcacattttagtaagtGGAAAGGATCCAAACTGTTGTGTCAGTCAACCAAGTGTTTAAtgagctaatcatttcagctgtaggcctgggtagtttaatttatacacAAACAtagtgtattttataaactacatgtgttttgtgtgcaacaatcttaatttgtaaagtaactagtaactaaagctgtcagattaatgtagtgaaaaagtatttccctctgaaatgcagCGGAGTAGAAGAAAGTGgcacgaaaagaaaagactcaagtaaattCCTCATTTGTACCTAAggacagtacttaagtaaatgtacttagttacattccacaacTGTGctcattttagttattttttagtgtttttaagtatatatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaaaatgatGTGAATCAGTAATCCTCATAGGGTTCCGTGTAGTTGGTGGTCTGCGGCCGAGGAATGGTGTAATCTTTGTTGTGGTCGATGTTCTGAAACACACGCAGAAACACGGAATCACagcttcatctggtcagtgcAGTCAACAGCCCTTATGATGATCTGTGCTTTCATTAACCTTACAATATGACGGAGTCATAATTGCCTGCAGTAGTGAAAGGTCACGGCCCTTAATTGCAGAGCATGATGTGAAGTCAGATTATTAATCCTAAAATGGGTTATTACTCACTGTCACGGCGAATCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU205640 False 1614 lncRNA 0.40 2 4411516 4413160
TU205642 False 1618 lncRNA 0.40 2 4411516 4413160
TU205643 True 1620 lncRNA 0.40 2 4411516 4413160

Neighbor

gene id symbol gene type direction distance location
LOC120574889 bglap coding downstream 52539 4355685 ~ 4358977 (-)
LOC120573904 NA coding downstream 60422 4347972 ~ 4351094 (-)
LOC120574171 wbp11 coding downstream 86875 4314794 ~ 4324641 (-)
ddx47 ddx47,LOC102790298 coding downstream 97180 4305836 ~ 4314336 (-)
LOC120574358 LOC102302242,LOC108236130,LOC103143665,LOC107376256,LOC103468406,LOC101471213,LOC105929903 coding downstream 107857 4215833 ~ 4303659 (-)
LOC120574253 NA coding upstream 80424 4493584 ~ 4505527 (-)
LOC120573943 gsg1 coding upstream 115292 4528452 ~ 4539716 (-)
tcf20 tcf20 coding upstream 129130 4542290 ~ 4560444 (-)
wbp2nl wbp2nl coding upstream 363602 4776762 ~ 4782184 (-)
rrp7a rrp7a,LOC102796085 coding upstream 378284 4791444 ~ 4794849 (-)
LOC120574176 NA non-coding downstream 74292 4334272 ~ 4337224 (-)
G151691 NA non-coding downstream 142862 4268330 ~ 4268654 (-)
G151639 LOC103360002,LOC100712452,LOC105013158,LOC102214151,LOC101470166,LOC106937022,LOC103143670 non-coding downstream 246018 4130804 ~ 4165498 (-)
G151615 NA non-coding downstream 299327 4055214 ~ 4112189 (-)
G151633 NA non-coding downstream 327835 4082918 ~ 4083681 (-)
G151785 NA non-coding upstream 64224 4477384 ~ 4478879 (-)
G151790 NA non-coding upstream 105621 4518781 ~ 4523574 (-)
G151799 NA non-coding upstream 170044 4583204 ~ 4584160 (-)
G151924 NA non-coding upstream 456727 4869887 ~ 4893318 (-)
G151951 NA non-coding upstream 600357 5013517 ~ 5024092 (-)
LOC120575464 NA other downstream 44173 4361848 ~ 4367343 (-)
G151344 smarca4 other downstream 1094601 3311727 ~ 3316915 (-)
G151227 LOC103393680 other downstream 1496149 2911326 ~ 2915367 (-)
G151216 LOC106957010,LOC107376217,LOC103393680 other downstream 1515173 2873918 ~ 2896343 (-)
G151146 NA other downstream 1606105 2399809 ~ 2805411 (-)
LOC120575466 LOC102292836,LOC101471904,LOC100692969,LOC103393382,LOC103468414,LOC102212070,LOC103143659,LOC102784177 other upstream 3017 4416177 ~ 4464991 (-)
LOC120574081 grin2b,fmc1,LOC102794452,LOC102794917 other upstream 172013 4585173 ~ 4765493 (-)
G152043 cdc42ep1,LOC102301584,LOC102206375,LOC102078793 other upstream 765156 5178316 ~ 5227241 (-)
G152114 rbx1 other upstream 1048686 5461846 ~ 5464418 (-)
top3a top3a,LOC102783137 other upstream 1136131 5549291 ~ 5567539 (-)

Expression


Co-expression Network