G152104 (tob2)


Basic Information

Item Value
gene id G152104
gene name tob2
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 5390505 ~ 5395115 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU206072
GGACAtgcatgcaaaaaaaataaataaaaaactctcCACGACTCTTTAagacaaaacaattaaataaaaaaaatcagtttccTCATTTATTTCCCGCAGGCCATCACAACCAGGGTTGACTGACAAACATTCACAGCACATTCATTTCCTTCATCCTCCCGAACCTGCCGTAACACCGCTTCCTATGGAGGAGATATACtggatttccccccccccaggtgCAGAGAGGTAGAAACCCCTTGAATCCTTCAGGGTAATTTAAATTATGGCATTACATTGCACTGGAGAAGGGTGAGCATCTGTGTAAGCAAAGACAGTCTGGGATATGGCTATAGTATCAGGACCAAAGGACCGGGCTGATGGGGAGAAGAGAACCCACTTAAAAAATTTAATGAATAACAAGAAATGTTATGGGATATATAATATAAGGGAGGTTAAAAGACATTTTGTTCATTTAAATCTGATTATATCTGGCTTTACGTACTGTAGTAGCACACGGGGGAAAACAGGAATGTTAGGGTTGatgtgaaatgtttaaataaagacGGGGAAAAAGGAAAGATATCGGTGGACACTTTCAAGggTGaccacaaaatgcaattaattcacattaaaaaaggaaaatggatGCATGAATGTGAAATGTGGAGATTTTTGGTTTAAATGTACTGCCTATGGGAGTAGTGCTGTCAGACTGCCCTGGGAGCACAGCAAAGAAAGTGATATCAGCCATCTtttcccacacacacccactgtAAACATTCACATCTTAAACTTCAAATCCAAACTTGAAGAATGAATACATTTAcccgtcttttttttttttttctttttttcgacaAATTCTGTACAAGGTACAATACACATTCAATACTTTTATTCTGTACatcttttcatttttgtctcagtttgCATATATTCATGTTATTTTCTGAAAAAATAACCTCAGCATGTAAGAAACTAAACAAATAATCTGAACATAAGAACTTTGTATATACATATTCCTGGACTTGTCATGTCTTACTTGTACAAATGTCAGTGATAAttctgcaaaaacaaaaatatagaaatattgtgaaataaattaaaaaaaaaagaaaattataaaTGCATCTTTCCCTTAACGATCAATAACGTTTGCCGAGAAGTGTGCCTCCCCACCCCATTCCcttgaaaagaaataaaaacgtgCATGCGTATGACAAGCTGTCACATTGCAAAACCAGCGTGAGCACAAGTCAAGGGTCCTTGGGTCATCTTAtacaaaacattcaaataaatgGACTTGGGTTGACAGCATCTCCTCACCAGCATGATGCGTTTTTGAATAGAAAAATCAAGCTCCATCTTTTCATGACAAGCTGAATAAAAAGGTGCCATTATCTAACAGAGGGCAAAGGAATGGCGCGGCGCTCGTGACTGCGGGCGACGCGCCGCCTCAGGAGCCCAGTGATAAAGTGCTGGACGGATCAAATGAACAGCCGAGAGCTAACCTTCCCTGTAGCGACAAACCAACAATCACGTGGACCTGGCTGGTAAACAAACCGCTGTTAGCAGCGGCAGACTTCCAGAGATCTGACAAGCTATCCAATAAAGCGACAAGAGCCACAGACCGCTGAAGAACATtcatttttgtatctttttgtcTGCAGAACTGGGTAGAAAGAGAGACCTGAAATGTAGGAttctgggggtgggggggggtggggggtttcTTTGTTACACAGCCAGGAGGAGAAGAGATCACTGAAGAATTtcaaggaggaggaagagaataGTGCGAGCCTTTTGCTTCAATTCCATTTAAGCTCACCAGAAACGTGTTCCGGGTTTTAAAGGGTCGCTCTCGACGCCAATACAGCCAGGACGACACAAGAGGCAACAGAACtctctctctctctctctctctctctcctttccttctctcctctccgtgCAGAGGAAAACCTCTCCTTCATAGTCAAAGTCATGCCAAGCCATATATCGCAATCCCTGCTGCTGCATCCCCCTACGCCAATTCACCTTCACACGCTGATGACTGGAATTGGGTGCGCGTGCACACGCATTTCTGCGAATGTGTGTGCACGTCGGCCCTTTTAAAATACACGTACGGAACTATAACTCGGATCCCAGTGTGTGTAACTGAGGTATCGGCGCATTGTTATGGTCTTAAAATGCCAACGATTGACTTGCTTTTCACATTCAAGGTTTCCCTGACCTTCCCAGCTGCAGTTTCCCCTGACAGATCCAATACATTCTACTACATCCCTCCCCTAACACCCCCGACGCTCCCGTCCTGCTCACTCCGCTGCTCTCACTTCATTTTAAAACCCACGTCATGTACCCATCCCAGCTGACTGTAAACCGCTTCCAATACACGCCCGGCGACAAAGTCAAATTGGGCCCGCGTATGAGTGAGTTTCGAGGGGTAACGGGGCCCACCGTACAAACAATGGGTCTCTCCATCACGCGGCGCCACAACAATACAGAACAggactacacacacagagacaggagagccccccccctgTCATCAAAGCCAACACACAGAACGTGATGAGTAACAGCAACGGACAAAAGGGCAGGCTGGGGTTggaggggagggaaggagggggggggggacagaggAACAAAACACAATCACATGAATTATTCAGTGGACGTGGTATTTTAAGTCTTTGTAGTAAAACTAATTCTTAACTTTTATTAGAACAATTTTTGttagaaaaactgaaaatatcTGGAGCGTCATTGTCCAAACCCACCTCCTCCCACAGCAATTCTTACTTCGTTACAAATGAAGGCTTAGTTGGCCAGCACGACCGGCTGGAAGGACTGGCTAGGGTATTGCAGGTTGTAGCTTCCTAAACCCTCGACAAACGGCGGCTTCTCCATGTAGGAGATTCCTCCGTTGCCGCCGATGATGCCCACGCTCTGGCCAGGGGGAGGGCTGGAGAAGGGGTCAAAGGACGGATGGGTGTTGACAGCGTGGGGGGGTTGGAATGGGCTGGCATGAGGCTGCATGGGCTGGGTGTCGGCATCAAAGTAAAGGGGGCCTGGGGATCCTGGGTAGACAAACTCTTTGGCGTTGGGAGAGAGCTGGCTGGCGATGGGACCTCCGAGGGAGTGCAAGGACAGGGACAGGGGCTTGTGCTTGAGCAGCTCCGGCGCCGAGATGTTGGTAGGAGAGCGGGTGAGCATCCTCTGGGCAGGAGGTAGGACCGCTCCGGGGCCGGCGGCCGACCCGGCCACGCTGCACTTCTTCATCTTGGTCGAGCCGAATTTAGTGGCGGCGAAGCTGGCGGTGGTGAAGGTGATGGGTTGAGGACGGGCAGTGGCGAGAGCGGAGGGCGGCTGCTGGGCGGAGAGGTAGGGCAGCCCGCCGCTGGGAGGAGAAGGGGTGGAGGTGTTTGAGGAGTGGGCGGCAGGGTCGGTGGGCGTGCTGGAGCTGGGGTAGCTGAAGAGGCCGGGGCAGGGCTGGCCAGAGAGAGGCGTGGGAGAGCTGGAGAGCGACGGCATGAGGGCAGGGGACGCCTGGCTCCCGATTGGCACAAACACCTGAGCGTCTGGGTTAAAGCCCAGACTCTTGGCCTCCTCTGCCTCTGCATCTCCTTTACCGTCTCTGATCACCCCCTCGGCCCGCTCGCCGTCACAGCCGAGGCCGGGAGGGTCCTCCAGGTAGAGAACCTTCACTGCCCCCTTCTCTCCGATCTGGTAGGATACCTCGTAAGGGTCAATCCACACACTGAGCTCCGCAGGGACATTCGCGCGCACTTCCTCGGTGTCCAGTCCACTTCTCTTGGCAGCCAACTCCACCACGGGGTCCCTCGGCGCTCCCAGGTGAATGCAGCGGAAGGCCGAGCCCCTGAGAGGGGCTTCAGGGTACCAGTGACCCTCAAAACGAGACATCAGTATCCTCTCCAGCTCCTCGCCAAACAGGTCAGCTCGACGCCGAGGCAGCTTGTTGTACAGGTAGGACACGATGAAGTTGAGGGCGACTTTCACTTCCAGATGCATGGCTGCACCAGGTTAGCGCCGTCGTGGGAGGAAAGGGATCCAGAGGATGCTGAAAGTGAGGCAATGCAACTGTGACAAGGAGTTTGTTTCCCCTCTGGCTTATTGTAAAGTGTATGATTCCTTTAGGGTCACCATGGTAAAGGCACCTTGAAGGCTGGGGCAGCAGGTTGCAGGCTGTCTTTTTTTCGTCGACAAATGCGTAACAATGTTTTCAGGTCCCAact

Function

symbol description
tob2 Predicted to enable transcription corepressor activity. Predicted to be involved in regulation of gene expression. Predicted to act upstream of or within negative regulation of osteoclast differentiation and positive regulation of ossification. Located in cytosol.

NR:

description
PREDICTED: protein Tob2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206072 True 4241 lncRNA 0.49 5 5390505 5395115

Neighbor

gene id symbol gene type direction distance location
LOC120574211 aco2,LOC103370792,LOC105918004 coding downstream 5661 5367065 ~ 5384844 (-)
polr3h polr3h coding downstream 23755 5360457 ~ 5366750 (-)
LOC120575093 LOC104932054,LOC103370794,LOC101074219,LOC100695912,LOC101476535 coding downstream 31674 5350169 ~ 5358831 (-)
gucy2ca gucy2c coding downstream 63835 5309600 ~ 5326670 (-)
LOC120575084 LOC105918010 coding downstream 108864 5276207 ~ 5281641 (-)
tefb LOC106601241,LOC106607162,LOC107091051 coding upstream 3908 5399023 ~ 5413979 (-)
LOC120575348 NA coding upstream 21022 5416137 ~ 5437363 (-)
st13 st13 coding upstream 71136 5466251 ~ 5478667 (-)
cbx7a NA coding upstream 138741 5533856 ~ 5541201 (-)
tnrc18 tnrc18 coding upstream 266746 5661861 ~ 5717548 (-)
G152081 NA non-coding downstream 100144 5287858 ~ 5290361 (-)
G152052 NA non-coding downstream 219853 5170304 ~ 5170652 (-)
G151951 NA non-coding downstream 366413 5013517 ~ 5024092 (-)
G151924 NA non-coding downstream 497187 4869887 ~ 4893318 (-)
G151799 NA non-coding downstream 806345 4583204 ~ 4584160 (-)
G152107 NA non-coding upstream 51388 5446503 ~ 5448057 (-)
G152233 ep300 non-coding upstream 113602 5508717 ~ 5509392 (-)
G152249 pdap1,LOC102785718 non-coding upstream 188264 5583379 ~ 5587735 (-)
G152256 NA non-coding upstream 206198 5601313 ~ 5606088 (-)
G152270 NA non-coding upstream 264971 5660086 ~ 5660898 (-)
G152043 cdc42ep1,LOC102301584,LOC102206375,LOC102078793 other downstream 163264 5178316 ~ 5227241 (-)
LOC120574081 grin2b,fmc1,LOC102794452,LOC102794917 other downstream 625012 4585173 ~ 4765493 (-)
LOC120575466 LOC102292836,LOC101471904,LOC100692969,LOC103393382,LOC103468414,LOC102212070,LOC103143659,LOC102784177 other downstream 925514 4416177 ~ 4464991 (-)
LOC120575464 NA other downstream 1023162 4361848 ~ 4367343 (-)
G151344 smarca4 other downstream 2073590 3311727 ~ 3316915 (-)
G152114 rbx1 other upstream 66731 5461846 ~ 5464418 (-)
top3a top3a,LOC102783137 other upstream 154176 5549291 ~ 5567539 (-)
atp5mf atp5j2,LOC102786280 other upstream 179565 5574680 ~ 5613722 (-)
bud31 bud31,LOC106595689 other upstream 185148 5580263 ~ 5582864 (-)
LOC120574101 NA other upstream 596822 5991937 ~ 5995189 (-)

Expression


Co-expression Network