G152270


Basic Information

Item Value
gene id G152270
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 5660086 ~ 5660898 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU206310
acttACACACCTTTGTAACCCTTTAAGGTGTGTGTTATTGCCTTCCAATCTCTATTTGCCCCCTATATCCATCCAAAGCCCAGCCTAAGGCCTTCAAACAgggtccaacacacacacacacacacacacacacacacacacacatatgaacaCGTATTGCCCACTTCGCCTTCATTTTCATTTGGTGTCATATGTTTTGAGATCCTGACTTTGTATATGTTCTTTTTAcaacagtttatgttttactttggcttgtctttaaaatgtttgtttttgctgtgatttattttttcaactctattttttttttttttttttttgcatgtttccGTCACTTGTTTTCCTGTTGCTTCCCCTCTCTGAACAATCGTCCACGCCTCTCAAGCAATACTGCTGACAGGCACTGGGAGCTAGCTGctagaaagagagaagaatggGAGAGAGCGCAAAAGAGAGaatgggagagaaagagagagagagagagagagagaggtggactGGAGGCTGGTTCTTCGTCTGCTGTTCCTTCAGTATATTGTCGtcctgttaaagaaaaaaaagattattttgaaaataaatagaaaaataagttttgtaaaTGATCCTTCACTGTCGAGTGGAGAAAAAGCTATCAGAATATACTTTGTACACATGTCTAATCttgtaaaaatgcaaaaagaatacattttagAGATGAATCTGAAACCAGATATATTCTGCTAccctatactgtatgtgtaaggtttttttttctgttttttacagACAGCAACCACGTTTATCagtgtttcttttaaattgttttagtAACTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206310 True 813 lncRNA 0.37 1 5660086 5660898

Neighbor

gene id symbol gene type direction distance location
cbx7a NA coding downstream 118885 5533856 ~ 5541201 (-)
st13 st13 coding downstream 181419 5466251 ~ 5478667 (-)
LOC120575348 NA coding downstream 222723 5416137 ~ 5437363 (-)
tefb LOC106601241,LOC106607162,LOC107091051 coding downstream 246107 5399023 ~ 5413979 (-)
LOC120574211 aco2,LOC103370792,LOC105918004 coding downstream 275242 5367065 ~ 5384844 (-)
tnrc18 tnrc18 coding upstream 963 5661861 ~ 5717548 (-)
actb2 actb,LOC102799139 coding upstream 64988 5725886 ~ 5730322 (-)
rnf216 rnf216,LOC107591749,LOC106595856 coding upstream 133209 5794107 ~ 5818120 (-)
smurf1 smurf1,LOC102787679,LOC103393300 coding upstream 160728 5821626 ~ 5840646 (-)
wipi2 wipi2 coding upstream 213844 5874742 ~ 5881666 (-)
G152256 NA non-coding downstream 53998 5601313 ~ 5606088 (-)
G152249 pdap1,LOC102785718 non-coding downstream 72351 5583379 ~ 5587735 (-)
G152233 ep300 non-coding downstream 150694 5508717 ~ 5509392 (-)
G152107 NA non-coding downstream 212029 5446503 ~ 5448057 (-)
G152104 tob2 non-coding downstream 264971 5390505 ~ 5395115 (-)
G152280 NA non-coding upstream 77033 5737931 ~ 5783361 (-)
G152298 NA non-coding upstream 131069 5791967 ~ 5792175 (-)
G152302 NA non-coding upstream 212879 5873777 ~ 5874308 (-)
G152329 NA non-coding upstream 287916 5948814 ~ 5949019 (-)
G152330 NA non-coding upstream 288379 5949277 ~ 5949495 (-)
atp5mf atp5j2,LOC102786280 other downstream 46364 5574680 ~ 5613722 (-)
bud31 bud31,LOC106595689 other downstream 77222 5580263 ~ 5582864 (-)
top3a top3a,LOC102783137 other downstream 92547 5549291 ~ 5567539 (-)
G152114 rbx1 other downstream 195668 5461846 ~ 5464418 (-)
G152043 cdc42ep1,LOC102301584,LOC102206375,LOC102078793 other downstream 432845 5178316 ~ 5227241 (-)
LOC120574101 NA other upstream 331039 5991937 ~ 5995189 (-)
G152441 LOC104944083,LOC103371237,LOC107087166,LOC105933549,LOC100701083,LOC101478422 other upstream 521510 6182408 ~ 6228114 (-)
G152567 NA other upstream 1058886 6719784 ~ 6720643 (-)
arhgdig NA other upstream 1111982 6772880 ~ 6801536 (-)
grin2aa grin2a,LOC102780805 other upstream 1908820 7569718 ~ 7723914 (-)

Expression


Co-expression Network