G152298


Basic Information

Item Value
gene id G152298
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 5791967 ~ 5792175 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU206342
GTTGATATTTCAGCCTGGATCAAAGAGGTGTACCAACAGACATTTGAGCCACACCGCTAGCATGGCTCAAAGAAGAGAATacagatatcctgacttttagtcctCTAAGAACACTGGctcctacacttcccataattCAATACAATTGTGTCTTTCATTAGACCCTCCCTGCCTGGTAATCACCAATGTTCGTCACACTCTATGTCTGC

Function

GO: NA

KEGG:

id description
ko04727 GABAergic synapse
ko05032 Morphine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU206342 True 209 lncRNA 0.44 1 5791967 5792175

Neighbor

gene id symbol gene type direction distance location
actb2 actb,LOC102799139 coding downstream 61645 5725886 ~ 5730322 (-)
tnrc18 tnrc18 coding downstream 74419 5661861 ~ 5717548 (-)
cbx7a NA coding downstream 250766 5533856 ~ 5541201 (-)
st13 st13 coding downstream 313300 5466251 ~ 5478667 (-)
LOC120575348 NA coding downstream 354604 5416137 ~ 5437363 (-)
rnf216 rnf216,LOC107591749,LOC106595856 coding upstream 1932 5794107 ~ 5818120 (-)
smurf1 smurf1,LOC102787679,LOC103393300 coding upstream 29451 5821626 ~ 5840646 (-)
wipi2 wipi2 coding upstream 82567 5874742 ~ 5881666 (-)
ap5z1 ap5z1 coding upstream 112763 5904938 ~ 5916956 (-)
c1qtnf6a LOC101473735,LOC102300081,LOC102790480,LOC100705049 coding upstream 167017 5959192 ~ 5967183 (-)
G152280 NA non-coding downstream 8606 5737931 ~ 5783361 (-)
G152270 NA non-coding downstream 131069 5660086 ~ 5660898 (-)
G152256 NA non-coding downstream 185879 5601313 ~ 5606088 (-)
G152249 pdap1,LOC102785718 non-coding downstream 204232 5583379 ~ 5587735 (-)
G152233 ep300 non-coding downstream 282575 5508717 ~ 5509392 (-)
G152302 NA non-coding upstream 81602 5873777 ~ 5874308 (-)
G152329 NA non-coding upstream 156639 5948814 ~ 5949019 (-)
G152330 NA non-coding upstream 157102 5949277 ~ 5949495 (-)
G152362 NA non-coding upstream 217072 6009247 ~ 6010851 (-)
G152400 NA non-coding upstream 317564 6109739 ~ 6109942 (-)
atp5mf atp5j2,LOC102786280 other downstream 178245 5574680 ~ 5613722 (-)
bud31 bud31,LOC106595689 other downstream 209103 5580263 ~ 5582864 (-)
top3a top3a,LOC102783137 other downstream 224428 5549291 ~ 5567539 (-)
G152114 rbx1 other downstream 327549 5461846 ~ 5464418 (-)
G152043 cdc42ep1,LOC102301584,LOC102206375,LOC102078793 other downstream 564726 5178316 ~ 5227241 (-)
LOC120574101 NA other upstream 199762 5991937 ~ 5995189 (-)
G152441 LOC104944083,LOC103371237,LOC107087166,LOC105933549,LOC100701083,LOC101478422 other upstream 390233 6182408 ~ 6228114 (-)
G152567 NA other upstream 927609 6719784 ~ 6720643 (-)
arhgdig NA other upstream 980705 6772880 ~ 6801536 (-)
grin2aa grin2a,LOC102780805 other upstream 1777543 7569718 ~ 7723914 (-)

Expression


Co-expression Network