arhgdig


Basic Information

Item Value
gene id arhgdig
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 6772880 ~ 6801536 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU206823
GATCCTCCAATTATCCAAATATTGTCTTTTCAAATCATTGATAAACTGGGATGAACAGATGGATCACCTCTTCTCACAAAGTGCACAACATGCATCTTTGACTTGTGTTTTGTCAAACTTAGACATGGTATATTTTAACATTGCAGTTTGCTTTCAAAGCGTCAGTTTTCTCGAGTCTTTGTGGAGCGTTTCGAAAGAGCAGACCAATTATTGACTGTAACTGAACCGTGCATATTTTAGAAAAGATGCATGTACTATTCATTCAGTAAAAATTAACTAAATTTGCCCTTTCAAAACCTCTCTCATATAAGGACACAAGATGTGAAtaaaattctgctttgaataaTAGTAAAACATTTGAAGATGGTAGCTGAAAGATGGAGTACTGTCTGAGAAGTATATAAAGGGATGAATTAATTccccttaaaaaaataagaaatatcaTTATTGTGTTAAGTCTTTGGATATGATATTGTCATCGTTGCTGAACATATTGAAGATTGAAATACCATTTGAAATCGTTGTGATCTAAGACTAACTGTAAATGTTGGCTTGTTGGGTGTTGCATGGTTTAGCAAgtttctctcttccttttttaCGACTTTATTGTAAAATttaatgtgattaaaaaaaaaaaaatactgacgCAATATCCAGATGTCAATGGTTGCCATATactgcagatacagtatttacagGGATATTTTTAAAGGCACAGACATCTGAAAACATTTGTCTGTTTAATTCCCCAGCCTGTAACTAACAAGTGCTGCATCCTCAAATATTGGTGTCAAATATCCTGTATCTTTTAATAAAGGCAATTCAAGCAACCAA
>XM_039823650.1
tgaTGATTTTAGCCTttagatttctttcttttttttgagcTTTAGCTTacgaaagagaagaagaagtgcAGAAAGCCGGCTGCTTCTCcctcaccctccctccctccctccatcgtctctctctcttgctcacaCACATCCCCATCACATCCACACCCACACCCTGCATCAGTCTCTCTCACGCCAGCCCTTTACTATTCCCCTTTAACCCCTCcaactacatttatttttttatttcctccgGTGAGGAGATGCTCATCTGACCCCTCCCTTTTCTTTCCAAATCCAAGACTTTTGTGGATGGTCTTCCTCTTTAATCCGTCCCTGCTCTGCTACTTTGTTGCTACCTGTGGAGGTTTCCCCAGTTTTCTGGTTTTTCTTCTGCCAGCCGTCACACAGAGTGCAGCCCCGCAGAGAGTCATCATGCTGGGATTGGACGTGTGTGAGTTTGGGGGTCAGGTGCTGGAGATGCTGTGGTTAACAATGTGCTACAGAGGTCTAATGGCTGACAAAAAGGATTGGCCTATTGAGGATGAAGAGGATGACAGAAACCTAAACTACATTGCTCCGGTCCAGAAGAGTTTGGAGGAGATTCGGCAACTGGACAAAGATGACGAGAGTCTCGTCAAGTACAAGCAGACCCTGCTGGGGAGGGAAACACTGccgtcagACCCCACGGCCTGTAACGTCCAGGTGACCAGACTgaccctgctgtgtgacgagGCTCCTGAACCAATCACCATGGACCTGACAGATGATCTGGGGGCTCTGAAGGAGACGACCTTCTCTCTAAAGGAAGGAGTGACGTACAGACTAAAGATTCACTTCAAGgtgaACAGAGAAATTGTTGCTGGCTTGCGGTACCATCAAGTGACCACCAGAAAAGGAATAAAAGTGAACAAGGCGACGCACATGGTGGGAAGTTACGGCCCAAAGGAAGAGGAGCACGAGTTTATTTGCCCGACCGATGAGGCACCCAAAGGCCTGATGTCACGTGGCTACTATCAGGTCAAGTCCTGCTTCATCGACGACGACAAGAACACCTACTTGGAATGGGAGTGGAACTTCAACATCACTAAGGACTGGAAGGAATAGataaagagagagtgagagagagatgatgctACTCTTCCCTTCTTTCACTCCTATTCTTCACCtccctcttttttcccccctttcaaCCTCCTCCATCTCGTCCCGTGAGAGCAGCCTTGCAATGGCCTGAGACGGGAGGCTCTACTTCTCCTTCCCTTCATCCCTATTCTCCTCTTCTACCTTTTCTTCCTTGTGTGGTAAATGCAGGGAAAGAATGAGAAAGaatcccccccctctctctctgccttctaTCCCTACATATTCTTCTTTCAGATTCTTCTACATCTATATCGCATCCACCCAGAGTTGTCCAGATGACGAAGCTTTTTGGATGACAAAGTCTCCTTTTCCTTTTAGCTACATGCCTACCCTGCCTCCATAAAGCAGCAGTGGCGCCTCTACAAAAGCAGGCGATTAAGGGAAATCAGTTTGTGGCACAAAGGGCAATACTTGCCTGAGAATcatcatgtttttaagctttCTTCTATCAAAGTAATCCAGTGATAGTTGTCCAATCCATGGGTACACTGCAAACAGGAACgtctaacagctaattcggcatattttaaacagtgccatgagctaaaaaaaaaaattagttgGCTTAAGTTGTAGTCCACCACATAACTCACTGAATCTATTGCAGCAAtatacttcctgtttacatccCCCAATACATTATGAGAGCATGATTATCCCCCAAATAGAGGTATGAATTATACatacaaacaataataataataataataatataataataggaTTGACAAAATCCAGTTGTCTCTGTTTTGTCCGTCTTAGAATAAATTAGGAAAAGATAAGAAGATGCAGTTGGAGATGCATCGATATTTCATCTGCTTTCTCATTTTTCTGTTGCGTCTTTCTCCACATTTTTCGGGAGTTAGAAATGTAACTGTAGGTGTCAGTTAGATCATGTATTTTCTTTATGTATTTCTTTAGTtaaagcatttatttttttatcatatgTGAAAGGGTATTGAGTAATAGCATACATCATTCAACATCAATTCTACAGGAAGTAAAGGAATGTTTTAGAATCCTATAAAAAGATGATCCTCCAATTATCCAAATATTGTCTTTTCAAATCATTGATAAACTGGGATGAACAGATGGATCACCTCTTCTCACAAAGTGCACAACATGCATCTTTGACTTGTGTTTTGTCAAACTTAGACATGGTATATTTTAACATTGCAGTTTGCTTTCAAAGCGTCAGTTTTCTCGAGTCTTTGTGGAGCGTTTCGAAAGAGCAGACCAATTATTGACTGTAACTGAACCGTGCATATTTTAGAAAAGATGCATGTACTATTCATTCAGTAAAAATTAACTAAATTTGCCCTTTCAAAACCTCTCTCATATAAGGACACAAGATGTGAAtaaaattctgctttgaataaTAGTAAAACATTTGAAGATGGTAGCTGAAAGATGGAGTACTGTCTGAGAAGTATATAAAGGGATGAATTAATTccccttaaaaaaataagaaatatcaTTATTGTGTTAAGTCTTTGGATATGATATTGTCATCGTTGCTGAACATATTGAAGATTGAAATACCATTTGAAATCGTTGTGATCTAAGACTAACTGTAAATGTTGGCTTGTTGGGTGTTGCATGGTTTAGCAAgtttctctcttccttttttaCGACTTTATTGTAAAATttaatgtgattaaaaaaaaaaaaatactgacgCAATATCCAGATGTCAATGGTTGCCATATactgcagatacagtatttacagGGATATTTTTAAAGGCACAGACATCTGAAAACATTTGTCTGTTTAATTCCCCAGCCTGTAACTAACAAGTGCTGCATCCTCAAATATTGGTGTCAAATATCCTGTATCTTTTAATAAAGGCAATTCAAGCAACCAA

Function

NR:

description
PREDICTED: rho GDP-dissociation inhibitor 2-like isoform X1

GO:

id name namespace
GO:0050790 regulation of catalytic activity biological_process
GO:0005737 cytoplasm cellular_component
GO:0005094 Rho GDP-dissociation inhibitor activity molecular_function

KEGG:

id description
K12462 ARHGDI, RHOGDI; Rho GDP-dissociation inhibitor

RNA

RNA id representative length rna type GC content exon number start site end site
TU206823 False 834 lncRNA 0.33 1 6772880 6773713
XM_039823650.1 True 3001 mRNA 0.41 6 6772880 6801536

Neighbor

gene id symbol gene type direction distance location
rpusd1 rpusd1 coding downstream 6565 6758260 ~ 6766315 (-)
slc25a17 slc25a17,LOC104965902,LOC102798647 coding downstream 16600 6750266 ~ 6756280 (-)
znf598 LOC101064755,LOC105416421,LOC103147408,LOC106595880,LOC104962932 coding downstream 24471 6738111 ~ 6748409 (-)
drg2 drg2,LOC107720047,LOC107674714 coding downstream 53983 6711624 ~ 6718897 (-)
myo15aa myo15a,LOC102214943,LOC103147438 coding downstream 74493 6650829 ~ 6698387 (-)
clcn7 clcn7 coding upstream 13140 6814676 ~ 6831673 (-)
LOC120573992 NA coding upstream 31825 6833361 ~ 6836823 (-)
usp7 usp7 coding upstream 59509 6861045 ~ 6891170 (-)
dctn5 dctn5 coding upstream 103483 6905019 ~ 6909430 (-)
LOC120575358 NA coding upstream 118405 6919941 ~ 6957625 (-)
G152577 NA non-coding downstream 15795 6756791 ~ 6757085 (-)
LOC120574035 NA non-coding downstream 61681 6709402 ~ 6711199 (-)
G152560 flii non-coding downstream 174004 6597999 ~ 6598876 (-)
G152559 flii,LOC102796290 non-coding downstream 175037 6597354 ~ 6597843 (-)
G152548 NA non-coding downstream 344644 6427328 ~ 6428236 (-)
G152720 NA non-coding upstream 211711 7013247 ~ 7013685 (-)
G152712 NA non-coding upstream 219933 7021469 ~ 7038559 (-)
G152730 NA non-coding upstream 399151 7200687 ~ 7200912 (-)
G152729 socs1,LOC100174889 non-coding upstream 402778 7204314 ~ 7206094 (-)
G152738 NA non-coding upstream 529274 7330810 ~ 7356838 (-)
G152567 NA other downstream 52237 6719784 ~ 6720643 (-)
G152441 LOC104944083,LOC103371237,LOC107087166,LOC105933549,LOC100701083,LOC101478422 other downstream 544766 6182408 ~ 6228114 (-)
LOC120574101 NA other downstream 777691 5991937 ~ 5995189 (-)
atp5mf atp5j2,LOC102786280 other downstream 1159158 5574680 ~ 5613722 (-)
bud31 bud31,LOC106595689 other downstream 1190016 5580263 ~ 5582864 (-)
grin2aa grin2a,LOC102780805 other upstream 768182 7569718 ~ 7723914 (-)
LOC120574885 LOC103375378,LOC104925605,LOC104966930 other upstream 1280602 8082138 ~ 8100398 (-)
G152952 NA other upstream 1639643 8441179 ~ 8444381 (-)
G153172 mrps34,LOC102799846 other upstream 1929861 8731397 ~ 8733019 (-)
natd1 natd1 other upstream 2010794 8812330 ~ 8816305 (-)

Expression


Co-expression Network