G153172 (mrps34,LOC102799846)


Basic Information

Item Value
gene id G153172
gene name mrps34,LOC102799846
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8731397 ~ 8733019 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU207482
gcagcttTATTTTCATCTCAAGTTTAATATTTACCACATTACACAGATGCACATTACAACCAAAGAGGCCTGCTTCAGATGAAAATAGCAGAGAACTCCTTTGAGTCCAGGATTTATCGGGACACTGAGCCGAGGGCTTCCAATGTACATAAAACGGATTTGGTTCAAAATGTCCAAGATTTGCATCTTCAGAACCATGAGTATCACACCGCTGTCCCCTCTGTCCTCCGCGTCTCTTGCTCCTGCTTGCGGAAATAGTCTTTGTTGAGCAGGACGTCCCTCTTTAAAGGCAAGGCTGGCTCCTCGGCTATTACGCTGCCCACTGTCTTCTTGTACTGGGCCAGCAGCATAGCGCGAAGCAGGGGCGGGTAGGGGACGTAGCGCACAGGTGGCTCAGGGAGCGGCTTAAAGTCCTTGATCTGGTGCTCCATGTGTTTGGGAATCAGGCGCCAGTCATGGTACatcaccttgtctacctccttGACCTCGCTCTCCTGCTTTCCTTTGTGGGTGAGGATCCCCCATGCTCTGCCGTGATCCATGTTCTCAGCTGTGTAGTCCACCTTGACCTTGGTGATCTGCCAGTAGCTGGGCTCGGTGTGGTCCTCCAGCCACGACTTGCGGGTAAAGAGGCGGCCCACTCCGAACAGCCTCATGCCTGCCAGCAGAGAGAAGAGGCGACTCTCCCTGCGGACATCCTGCCAGGCCAGCACAGGCAGCATCTTTCCCGTGTGAGGCCGCTTCATCGTCTCATAGTCCAGGGCGTACTTCTGGGACTCCCGCGGCCGGGACTTGAGCTCTCGGTACGCCCGGATCTTCCGAGCCATTTCGGCTATGAGGCGAAGACGCTTTTTCTTCACCATGACTGCCTGATGTGCAGCAGCTACTCCACAGTCCTCACTGGTAAACTGCGGTCAGTGTTT

Function

symbol description
mrps34 Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to be located in mitochondrion and ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 32. Orthologous to human MRPS34 (mitochondrial ribosomal protein S34).

NR:

description
PREDICTED: 28S ribosomal protein S34, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207482 True 923 TUCP 0.54 3 8731397 8733019

Neighbor

gene id symbol gene type direction distance location
nudt9 nudt9 coding downstream 65743 8660302 ~ 8665654 (-)
si:ch211-11k18.4 LOC101474882,LOC102302894 coding downstream 72178 8651632 ~ 8659219 (-)
rabep2 rabep2 coding downstream 90962 8627083 ~ 8640435 (-)
LOC120573875 LOC104929518,LOC103375462,LOC108242957 coding downstream 210810 8513629 ~ 8520587 (-)
LOC120575363 LOC103375241,LOC104929519,LOC102212394,LOC101477022,LOC102794201,LOC102305637 coding downstream 219557 8506317 ~ 8511840 (-)
mapk8ip3 mapk8ip3 coding upstream 6612 8739631 ~ 8768700 (-)
jpt2 hn1l coding upstream 39845 8772864 ~ 8778762 (-)
dhrs7b dhrs7b coding upstream 66456 8799475 ~ 8805852 (-)
tmem11 tmem11 coding upstream 74215 8807234 ~ 8810350 (-)
tmem86b LOC103374980 coding upstream 128143 8861162 ~ 8862826 (-)
G153139 NA non-coding downstream 46644 8659611 ~ 8684753 (-)
G153143 NA non-coding downstream 84106 8647083 ~ 8647291 (-)
G153142 NA non-coding downstream 86372 8644784 ~ 8645025 (-)
G153130 atp2a1 non-coding downstream 115285 8612277 ~ 8616112 (-)
G153127 atp2a1,LOC102238060,LOC106906942,LOC103469116 non-coding downstream 119400 8551296 ~ 8611997 (-)
G153274 NA non-coding upstream 328277 9061296 ~ 9111224 (-)
G153275 NA non-coding upstream 331977 9064996 ~ 9085687 (-)
G153455 NA non-coding upstream 463739 9196758 ~ 9203859 (-)
G153456 NA non-coding upstream 466639 9199658 ~ 9501467 (-)
G153462 NA non-coding upstream 486580 9219599 ~ 9219903 (-)
G152952 NA other downstream 287016 8441179 ~ 8444381 (-)
LOC120574885 LOC103375378,LOC104925605,LOC104966930 other downstream 630999 8082138 ~ 8100398 (-)
grin2aa grin2a,LOC102780805 other downstream 1007483 7569718 ~ 7723914 (-)
arhgdig NA other downstream 1929861 6772880 ~ 6801536 (-)
G152567 NA other downstream 2010754 6719784 ~ 6720643 (-)
natd1 natd1 other upstream 79311 8812330 ~ 8816305 (-)
tufm tufm,LOC106606342,LOC101070424,LOC106606341,LOC106931188,LOC103145412 other upstream 117424 8850443 ~ 8857571 (-)
zgc:55558 p-ras,LOC105029053,LOC104950842,LOC104930345,LOC103392975,LOC101069736,LOC106606379,LOC103023536,LOC108413997 other upstream 162763 8895782 ~ 8907662 (-)
LOC120574599 NA other upstream 454231 9187250 ~ 9204006 (-)
LOC120574343 NA other upstream 456365 9189384 ~ 9190066 (-)

Expression


Co-expression Network