LOC120574599


Basic Information

Item Value
gene id LOC120574599
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9187250 ~ 9204006 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU207884
gtggacacacagtttaacatgatggactataggacaggactgctgcttttaactctctgctgggcaggtgttgatggtcagactctgacacaatctgaaccagcgattaaaagacctggagaatctcacagattgacctgtacagCCTCTGCATTGGATGTTAATGGCTACACCATGCACTGGATCAGACAGGCTGctggaaaaggactggaatGGATCGCTTACATTAGCAGTAACAGTGGCAGCATCCGCTACTCTCAGTCAGTTCAAGGCCGGT
>TU207886
cacagtttaacatgatggactataggacaggactgctgcttttaactctctgctgggcaggtgttgatggtcagactctgacacaatctgaaccagcgattaaaagacctggagaatctcacagattgacctgtacagCCTCTGCATTGGATGTTAATGGCTACACCATGCACTGGATCAGACAGGCTGctggaaaaggactggaatGGATCGCTTACATTAGCAGTAACAGTGGCAGCATCCGCTACTCTCAGTCAGTTCAAGGCCGGT
>unassigned_transcript_739
atgatggactataggacaggactgctgcttttaactctctgctgggcaggtgttgatggtcagactctgacagaatctgaaccagcggttaaaagacctggagaatcccacagattgacctgtacaacatctggattCACACTTAGTAGCTACTGGATAGCCtggatcagacaggctcctgaaaaaggactggagtggattgcTACTGATGGTGGTAGTAGCAAAtactactctcagtcagtccaaggccggtttaccatctccagagacaacagcagagagcagctgtatctgcagatgaacagtctgaagactgaagattctgctgtttattattgtgctcgagagccacagtgactggagttggttgagcagctgtacaaaatccTACAGTACTCATTCTTTCAGGCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207884 False 277 lncRNA 0.48 2 9187250 9194175
TU207886 False 270 lncRNA 0.48 2 9187250 9204006
unassigned_transcript_739 True 413 V_gene_segment 0.47 2 9193618 9194157

Neighbor

gene id symbol gene type direction distance location
cabp5b LOC104945275,LOC103374841,LOC100700336,LOC104930357 coding downstream 139127 9043413 ~ 9048123 (-)
sez6l2 sez6l2 coding downstream 150422 9020086 ~ 9036828 (-)
kctd13 kctd13,LOC104945278 coding downstream 168510 9011223 ~ 9018740 (-)
hirip3 NA coding downstream 176319 9003265 ~ 9010931 (-)
antkmt LOC103374876 coding downstream 184099 8998880 ~ 9003151 (-)
LOC120574368 NA coding upstream 187559 9391565 ~ 9406804 (-)
LOC120574369 NA coding upstream 203848 9407854 ~ 9408482 (-)
LOC120574660 NA coding upstream 216146 9420152 ~ 9420698 (-)
LOC120574659 NA coding upstream 220503 9424509 ~ 9425046 (-)
LOC120574373 NA coding upstream 231286 9435292 ~ 9436866 (-)
G153274 NA non-coding downstream 76026 9061296 ~ 9111224 (-)
G153275 NA non-coding downstream 101563 9064996 ~ 9085687 (-)
G153137 NA non-coding downstream 410984 8700109 ~ 8776266 (-)
G153139 NA non-coding downstream 502497 8659611 ~ 8684753 (-)
G153143 NA non-coding downstream 539959 8647083 ~ 8647291 (-)
G153462 NA non-coding upstream 15593 9219599 ~ 9219903 (-)
G153508 NA non-coding upstream 44391 9248397 ~ 9303347 (-)
G153509 NA non-coding upstream 54204 9258210 ~ 9265367 (-)
G153498 NA non-coding upstream 84297 9288303 ~ 9715061 (-)
G153527 NA non-coding upstream 155522 9359528 ~ 9359850 (-)
zgc:55558 p-ras,LOC105029053,LOC104950842,LOC104930345,LOC103392975,LOC101069736,LOC106606379,LOC103023536,LOC108413997 other downstream 279588 8895782 ~ 8907662 (-)
tufm tufm,LOC106606342,LOC101070424,LOC106606341,LOC106931188,LOC103145412 other downstream 329679 8850443 ~ 8857571 (-)
natd1 natd1 other downstream 370945 8812330 ~ 8816305 (-)
G153172 mrps34,LOC102799846 other downstream 454231 8731397 ~ 8733019 (-)
G152952 NA other downstream 742869 8441179 ~ 8444381 (-)
LOC120574662 NA other upstream 13063 9217069 ~ 9224455 (-)
LOC120574348 NA other upstream 16535 9220541 ~ 9221090 (-)
LOC120574641 NA other upstream 17574 9221580 ~ 9222078 (-)
LOC120574350 NA other upstream 23260 9227266 ~ 9227715 (-)
LOC120574657 NA other upstream 35403 9239409 ~ 9240018 (-)

Expression


Co-expression Network