LOC120574662



Basic Information


Item Value
gene id LOC120574662
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9217069 ~ 9224455 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU207900
caggtgttgatggtcagactctgacagaatctgaaccagcgattaaaagacctggagaatcccacagattgacctgtacaacatctggattCACATTTAGTAGTTACGGGATGGCCtggatcagacaggctcctggaaaaggactggagtggattgcGATTATCTACACTACTGACATCtactactctcagtcagtccaaggccggtttaccatctccagagacaacagcagagagcagctgtatctgcagatgaacagtctgaagactgaagattctgctgtttattattgtgctcgagacc
>unassigned_transcript_742
atgatggactataggacaggactgctgcttttaactctctgctgggcaggtgttgatggtcagactctgacagaatctgaaccagcgattaaaagacctggagaatcccacagattgacctgtacaacatctggattCACATTTAGTAGTTACGGGATGGCCtggatcagacaggctcctggaaaaggactggagtggattgcGATTATCTACACTACTAGCATCTACTACTCTCAGTCAGTTCAAGGCCGGTTTACCAtctccagagacaacagcaaacagcagctgtatctgcagatgaacagtctgaagactgaagattctgctgtttattattgtgct

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU207900 False 303 lncRNA 0.47 2 9217069 9224320
unassigned_transcript_742 True 342 V_gene_segment 0.46 2 9224025 9224455

Neighbor


gene id symbol gene type direction distance location
cabp5b LOC104945275,LOC103374841,LOC100700336,LOC104930357 coding downstream 168946 9043413 ~ 9048123 (-)
sez6l2 sez6l2 coding downstream 180241 9020086 ~ 9036828 (-)
kctd13 kctd13,LOC104945278 coding downstream 198329 9011223 ~ 9018740 (-)
hirip3 NA coding downstream 206138 9003265 ~ 9010931 (-)
antkmt LOC103374876 coding downstream 213918 8998880 ~ 9003151 (-)
LOC120574368 NA coding upstream 167110 9391565 ~ 9406804 (-)
LOC120574369 NA coding upstream 183399 9407854 ~ 9408482 (-)
LOC120574660 NA coding upstream 195697 9420152 ~ 9420698 (-)
LOC120574659 NA coding upstream 200054 9424509 ~ 9425046 (-)
LOC120574373 NA coding upstream 210837 9435292 ~ 9436866 (-)
G153455 NA non-coding downstream 13210 9196758 ~ 9203859 (-)
G153274 NA non-coding downstream 105845 9061296 ~ 9111224 (-)
G153275 NA non-coding downstream 131382 9064996 ~ 9085687 (-)
G153137 NA non-coding downstream 440803 8700109 ~ 8776266 (-)
G153139 NA non-coding downstream 532316 8659611 ~ 8684753 (-)
G153508 NA non-coding upstream 23942 9248397 ~ 9303347 (-)
G153509 NA non-coding upstream 33755 9258210 ~ 9265367 (-)
G153498 NA non-coding upstream 63848 9288303 ~ 9715061 (-)
G153527 NA non-coding upstream 135073 9359528 ~ 9359850 (-)
G153539 NA non-coding upstream 317663 9542118 ~ 9548305 (-)
LOC120574599 NA other downstream 13063 9187250 ~ 9204006 (-)
LOC120574654 NA other downstream 24667 9191986 ~ 9192402 (-)
LOC120574343 NA other downstream 27003 9189384 ~ 9190066 (-)
zgc:55558 p-ras,LOC105029053,LOC104950842,LOC104930345,LOC103392975,LOC101069736,LOC106606379,LOC103023536,LOC108413997 other downstream 309407 8895782 ~ 8907662 (-)
tufm tufm,LOC106606342,LOC101070424,LOC106606341,LOC106931188,LOC103145412 other downstream 359498 8850443 ~ 8857571 (-)
LOC120574350 NA other upstream 2811 9227266 ~ 9227715 (-)
LOC120574657 NA other upstream 14954 9239409 ~ 9240018 (-)
LOC120574593 NA other upstream 16375 9240830 ~ 9241342 (-)
LOC120574351 NA other upstream 18693 9243148 ~ 9243779 (-)
LOC120574352 NA other upstream 19987 9244442 ~ 9337866 (-)

Expression



Co-expression Network