LOC120574579


Basic Information

Item Value
gene id LOC120574579
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9697643 ~ 9739305 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU207919
agagaacagtggacacacagtttaacatgatggactataggacaggactgctgcttttaactctctgctgggcaggtgttgatggtcagactctgacagaatctgaaccagcgattaaaagacctggagaatctcacagattgacctgtacagCCTCTGGGTTCAATTTAGGCAGCTATCACATGGCCtggatcagacaggctcctggaaaaggactggagtggattgcCTGGAATAGTAACGGTGGCACAAAAtactactctcagtcagtccaaggccggtttaccatctccagagatgacagcagacagcagctgtatctgcagatgaacagtctgaagactgaagattctgctgtttattattgtgctcgagagccacagtgactggagttggttgagcagctgtacaaaatccTACAGTACTCAT
>XM_039825001.1
TgcagcagaagaagagaagctCCCATCAGATCACCTTCAATAGCAACCATGTTCTCtgtagctctgctgctgctgctggctgctggatCCTgtgttgatggtcagactctgacagaatctgaaccagcgattaaaagacctggagaatctcacagattgacctgtacagCCTCTGGGTTCAATTTAGGCAGCTATCACATGGCCtggatcagacaggctcctggaaaaggactggagtggattgcCTGGAATAGTAACGGTGGCACAAAAtactactctcagtcagtccaaggccggtttaccatctccagagatgacagcagacagcagctgtatctgcagatgaacagtctgaagactgaagattctgctgtttattattgtgctcgagagccacaGGGTGACTATGCTTTCGACTACTTGGGCCGTGGGACTGTAGTCACAGTAACAGATACTACAACTGCACCGACTCTGTTCCCTTTGGTTCAGTGCAAACCTGGGGCTGCAGATACAATCACTGTTGGCTGTCTTGCTCAAGACTTCTACCCAAAGAGTCTTACTTTACAGTGGACCGATGCCAGTGGGAAAAGCCTTGCTACAGCTGTACAATATCCTCCAGctgagaaaaacaacaaatatacaGGAGTCAGTTTGCTCACTGTATCAAAATCTGAATGGGATTCATGGAGCTCTTTTACTTGTTCTGTGACTCACCCTGGAACGCCCCCCCCCGTGACACTGTTAAAAaAGGCCTCATTGCCTGTCAAAATGGAACTGAACCAACCAAGTCCCAAAGAAATCTTTAGCAACAACCAGGCAAAGTTGAAGTGTATCGTTACTGGACTGGACCAGAATGTTGTAGATCAAATTCAAATCACTTGGAATATCGATGGATCCCCTGTGACCAACAACATCACACCAACACAGTCGGGAGTCAGCACAATGACTCTTACCCGCACTGAGTGGTACAAAGTCAACAACGTGGGCTGTTCTGCCACAAAAGACGATATGACACCAGTTATTCAAGATCTGACTTTCCGCAAAGGAGATGGGAGCGAGCCAAAAGTAACAGTCCACATCCTCCCAGATGAGGACATCATCGATGAGGTCACTCTGGTGTGCCTGGTGTCCAATCCGGTGCAGCAAGATTACTACATCGCCTGGTCAGAACATATTGGAACAAACCCCCCCATCTATACTGATGGCATTAACTTCAGCCAAGTGAAGACCCAACAAGGCTACTCAGTTGCAAGTATTTACACCACCACCAAAGACAAGTGGAACAACTCCACCATGTTCTCCTGCCACGTATGGCCTGGTAGAGGCGAAACGCCTATTAAATCCAGAGATGTGTCTAAGGCCATGAGTAGCCCCATTGAATGTGAGAAATAGTAGATTCAGCTTTAAATGTGGCAGTTTGTGCTAATGTGttgttctgtctctgtgtgtactctCTGCCATGAGAACCTGTCTTTGTGATTGTAAAACGGTCAATTTACTATTGTTTGTCATATTGTGTTTCAATCTGTCTACGTCACATTGTCTA

Function

GO:

id name namespace
GO:0030163 protein catabolic process biological_process
GO:1901565 organonitrogen compound catabolic process biological_process
GO:0009057 macromolecule catabolic process biological_process
GO:0044257 cellular protein catabolic process biological_process
GO:0044265 cellular macromolecule catabolic process biological_process
GO:0046686 response to cadmium ion biological_process
GO:0051603 proteolysis involved in cellular protein catabolic process biological_process
GO:0010035 response to inorganic substance biological_process
GO:0010038 response to metal ion biological_process

KEGG:

id description
ko02010 ABC transporters

RNA

RNA id representative length rna type GC content exon number start site end site
TU207919 False 429 TUCP 0.47 2 9737970 9738487
XM_039825001.1 True 1546 mRNA 0.46 7 9697643 9739305

Neighbor

gene id symbol gene type direction distance location
LOC120574373 NA coding downstream 260777 9435292 ~ 9436866 (-)
LOC120574659 NA coding downstream 272597 9424509 ~ 9425046 (-)
LOC120574660 NA coding downstream 276945 9420152 ~ 9420698 (-)
LOC120574369 NA coding downstream 289161 9407854 ~ 9408482 (-)
LOC120574368 NA coding downstream 290839 9391565 ~ 9406804 (-)
cacna1aa NA coding upstream 321981 10061286 ~ 10149482 (-)
gtf2f1 gtf2f1 coding upstream 427407 10166712 ~ 10176011 (-)
luc7l3 luc7l3,LOC102798435 coding upstream 869693 10608998 ~ 10618057 (-)
LOC120574864 tob1 coding upstream 934037 10673342 ~ 10677290 (-)
spag9a NA coding upstream 999603 10738908 ~ 10772253 (-)
G153481 NA non-coding downstream 94537 9602857 ~ 9603106 (-)
G153539 NA non-coding downstream 149338 9542118 ~ 9548305 (-)
G153456 NA non-coding downstream 196176 9199658 ~ 9501467 (-)
G153588 NA non-coding upstream 12954 9752259 ~ 9798267 (-)
G153591 NA non-coding upstream 39984 9779289 ~ 9782563 (-)
G153597 NA non-coding upstream 54787 9794092 ~ 9842982 (-)
G153596 NA non-coding upstream 167935 9907240 ~ 10018859 (-)
G153622 NA non-coding upstream 279561 10018866 ~ 10019266 (-)
LOC120574389 NA other downstream 8038 9637653 ~ 9689605 (-)
LOC120574592 NA other downstream 11595 9685396 ~ 9686048 (-)
LOC120574395 NA other downstream 15879 9680832 ~ 9681764 (-)
G153579 NA other downstream 15896 9676224 ~ 9681747 (-)
LOC120574394 NA other downstream 16837 9680101 ~ 9680806 (-)
LOC120574648 NA other upstream 82840 9822145 ~ 9822993 (-)
gtpbp1 gtpbp1,LOC104924447,LOC102799794 other upstream 612853 10352158 ~ 10390176 (-)
LOC120574455 NA other upstream 1044807 10784112 ~ 10791565 (-)
LOC120574486 NA other upstream 1339240 11078545 ~ 11080607 (-)
tnrc6c1 LOC103361861 other upstream 1359011 11098316 ~ 11137528 (-)

Expression


Co-expression Network