LOC120574352


Basic Information

Item Value
gene id LOC120574352
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9244442 ~ 9337866 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU207935
agtcgatgcaaaactcagatatcttcacctctacttatctgagtgcagagaggaggacagagaacagtggacacacagtttaacatgatggactataggacaggactgctgctgttaactctctgctgggcaggtgttgatggtcagactctgacagaatctgaaccagcgattaaaagacctggagaatcccacagattgacctgtacaacatctggattCACACTTAGTAGCTACTGGATGCACtggatcagacaggctcctggaaaaggactggagtggattgcTGCTGATACTAGTAGTAGTAGCAACTACTACTCTCAGTCAGTTCAAGGCCGGT
>unassigned_transcript_747
atgatggactataggacaggactgctgcttttaactctctgctgggcaggtgttgatggtcagactctgacagaatctgaaccagcgattaaaagacctggagaatcccacagattgacctgtacaacatctggattCACACTTAGTAGCTACTGGATGCACtggatcagacaggctcctggaaaaggactggagtggattgcTGCTGATACTAGTAGTAGTAGCAACTACTACTCTCAGTCAtcagtccaaggccggtttaccatctccagagacaacagcagagagcagctgtatctgcagatgaacagtctgaagactgaagattctgctgtttattattgtCCTCTGCAGGTGCAGACTGAGTCAAGTTCCCACCATGACAGTTGTACAGAGTGTCCTCCTCTTGGCTCTCATTTCAGCTGGTCAGGGCCAGTCCCTCACCTCCTCAGAGCCAGTGGTGAGCAGAGCTGGACAACCAGTCACTCTGTCCTGTAA

Function

GO: NA

KEGG:

id description
ko04060 Cytokine-cytokine receptor interaction
ko04662 B cell receptor signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU207935 False 340 lncRNA 0.47 2 9246355 9337866
unassigned_transcript_747 True 498 V_gene_segment 0.49 5 9244442 9246696

Neighbor

gene id symbol gene type direction distance location
cabp5b LOC104945275,LOC103374841,LOC100700336,LOC104930357 coding downstream 196319 9043413 ~ 9048123 (-)
sez6l2 sez6l2 coding downstream 207614 9020086 ~ 9036828 (-)
kctd13 kctd13,LOC104945278 coding downstream 225702 9011223 ~ 9018740 (-)
hirip3 NA coding downstream 233511 9003265 ~ 9010931 (-)
antkmt LOC103374876 coding downstream 241291 8998880 ~ 9003151 (-)
LOC120574368 NA coding upstream 53699 9391565 ~ 9406804 (-)
LOC120574369 NA coding upstream 69988 9407854 ~ 9408482 (-)
LOC120574660 NA coding upstream 82286 9420152 ~ 9420698 (-)
LOC120574659 NA coding upstream 86643 9424509 ~ 9425046 (-)
LOC120574373 NA coding upstream 97426 9435292 ~ 9436866 (-)
G153462 NA non-coding downstream 24539 9219599 ~ 9219903 (-)
G153455 NA non-coding downstream 40583 9196758 ~ 9203859 (-)
G153274 NA non-coding downstream 133218 9061296 ~ 9111224 (-)
G153275 NA non-coding downstream 158755 9064996 ~ 9085687 (-)
G153137 NA non-coding downstream 468176 8700109 ~ 8776266 (-)
G153527 NA non-coding upstream 21662 9359528 ~ 9359850 (-)
G153539 NA non-coding upstream 204252 9542118 ~ 9548305 (-)
G153481 NA non-coding upstream 264991 9602857 ~ 9603106 (-)
G153588 NA non-coding upstream 414393 9752259 ~ 9798267 (-)
G153591 NA non-coding upstream 441423 9779289 ~ 9782563 (-)
LOC120574351 NA other downstream 663 9243148 ~ 9243779 (-)
LOC120574593 NA other downstream 3100 9240830 ~ 9241342 (-)
LOC120574657 NA other downstream 4424 9239409 ~ 9240018 (-)
LOC120574350 NA other downstream 16727 9227266 ~ 9227715 (-)
LOC120574641 NA other downstream 22364 9221580 ~ 9222078 (-)
LOC120574363 NA other upstream 1405 9339271 ~ 9339721 (-)
LOC120574640 NA other upstream 3044 9340910 ~ 9341346 (-)
LOC120574364 NA other upstream 5835 9343701 ~ 9345215 (-)
LOC120574365 NA other upstream 10203 9348069 ~ 9349773 (-)
LOC120574646 NA other upstream 30791 9368657 ~ 9369149 (-)

Expression


Co-expression Network