LOC120574382



Basic Information


Item Value
gene id LOC120574382
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9490634 ~ 9491209 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU208006
cagaagagctgaCATCAGTTCAGcttcaacatcaacatgttctctgtagctctgatactgctgctggctgctggatCCTGTGTGAACAGTATTGATCTCATCCAGACAGACTCAATGGTTGTGCAGCCTGGACAGTCTCTGACCATCAGCTGTCAGGTCTCTGGTTATTCTTTGACTGATAACAGCTATGCAACAGGTTGGATCAGACAGAGTGAAGGAAAACCAATGGACTGGATTTCCCATCAGTGGGGTGGAGGTAGCCTTCGTCAAAATGATGctctgaagaacaagttcagcTACAGCAGAGACACTTCTGCTCTAACAGTGACTCTAAAAGGACAGAATGTGCAGCCTGAGGACAcagctgtgtattactgtgtacGTTAC
>unassigned_transcript_781
catcaacatgttctctgtagctctgatactgctgctggctgctggatCCTGTGTGAACAGTATTGATCTCATCCAGACAGACTCAATGGTTGTGCAGCCTGGACAGTCTCTGACCATCAGCTGTCAGGTCTCTGGTTATTCTTTGACTGATAACAGCTATGCAACAGGTTGGATCAGACAGAGTGAAGGAAAACCAATGGACTGGATTTCCCATCAGTGGGGTGGAGGTAGCCTTCGTCAAAATGATGctctgaagaacaagttcagcTACAGCAGAGACACTTCTGCTCTAACAGTGACTCTAAAAGGACAGAATGTGCAGCCTGAGGACAcagctgtgtattactgtgtacGTTACCCCACAGTGATACAAACCACCAACAGACCTGCACAAATACCCAGCAACCAGCATgactcaaccacacacacatgttctaaATGTGAACATTAA

Function


GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway
ko05310 Asthma
ko05340 Primary immunodeficiency

RNA


RNA id representative length rna type GC content exon number start site end site
TU208006 False 387 TUCP 0.47 2 9490727 9491209
unassigned_transcript_781 True 451 V_gene_segment 0.46 2 9490634 9491180

Neighbor


gene id symbol gene type direction distance location
LOC120574373 NA coding downstream 53768 9435292 ~ 9436866 (-)
LOC120574659 NA coding downstream 65588 9424509 ~ 9425046 (-)
LOC120574660 NA coding downstream 69936 9420152 ~ 9420698 (-)
LOC120574369 NA coding downstream 82152 9407854 ~ 9408482 (-)
LOC120574368 NA coding downstream 83830 9391565 ~ 9406804 (-)
cacna1aa NA coding upstream 570077 10061286 ~ 10149482 (-)
gtf2f1 gtf2f1 coding upstream 675503 10166712 ~ 10176011 (-)
luc7l3 luc7l3,LOC102798435 coding upstream 1117789 10608998 ~ 10618057 (-)
LOC120574864 tob1 coding upstream 1182133 10673342 ~ 10677290 (-)
spag9a NA coding upstream 1247699 10738908 ~ 10772253 (-)
G153527 NA non-coding downstream 130784 9359528 ~ 9359850 (-)
G153508 NA non-coding downstream 187287 9248397 ~ 9303347 (-)
G153509 NA non-coding downstream 225267 9258210 ~ 9265367 (-)
G153462 NA non-coding downstream 270731 9219599 ~ 9219903 (-)
G153455 NA non-coding downstream 286775 9196758 ~ 9203859 (-)
G153539 NA non-coding upstream 50909 9542118 ~ 9548305 (-)
G153481 NA non-coding upstream 111648 9602857 ~ 9603106 (-)
G153588 NA non-coding upstream 261050 9752259 ~ 9798267 (-)
G153591 NA non-coding upstream 288080 9779289 ~ 9782563 (-)
G153597 NA non-coding upstream 302883 9794092 ~ 9842982 (-)
LOC120574661 NA other downstream 3050 9487028 ~ 9487584 (-)
LOC120574381 NA other downstream 6528 9483645 ~ 9484106 (-)
LOC120574647 NA other downstream 8958 9481185 ~ 9481676 (-)
LOC120574594 NA other downstream 15285 9474829 ~ 9475349 (-)
LOC120574601 NA other downstream 18269 9471815 ~ 9472365 (-)
LOC120574603 NA other upstream 458 9491667 ~ 9495065 (-)
LOC120574650 NA other upstream 4674 9495883 ~ 9496318 (-)
LOC120574383 NA other upstream 7732 9498941 ~ 9503909 (-)
LOC120574600 NA other upstream 13552 9504761 ~ 9505246 (-)
LOC120574586 NA other upstream 37776 9528985 ~ 9529472 (-)

Expression



Co-expression Network