LOC120574390



Basic Information


Item Value
gene id LOC120574390
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9648662 ~ 9651867 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU208046
AGAGGATCAGAAGCTCACATCTCATCAGTTTCAACATAAACCATGTTCTCtggagctctgctgctgctgttggcagCTGGATgtgtgaagtgtgaacagtTGACCCAGCCAGCCTCTGTGACTGTGCAGCCAGGTCAACGTCTGACCATCACCTGTCAGGTCTCTTATTCTGTTGATAGctactacacagcttggatcagacagcctgcagggaaaggactggagtggattaGTAGAGATACAAACGTCAAAGATtcactgaagaacaagttcagtgTAAACTTGGACTCTTCCAGTAACACAGTGACTCTAAATGGACAAAATGTGCAGTCTGAAGACactgctgtgtattactgtgccag
>unassigned_transcript_809
GAGGATCAGAAGCTCACATCTCATCAGTTTCAACATAAACCATGTTCTCtggagctctgctgctgctgttggcagCTGGATgtgtgaagtgtgaacagtTGACCCAGCCAGCCTCTGTGACTGTGCAGCCAGGTCAACGTCTGACCATCACCTGTCAGGTCTCTTATTCTGTTGATAGctactacacagcttggatcagacagcctgcagggaaaggactggagtggattaGTAGAGATACAAACGTCAAAGATtcactgaagaacaagttcagtgTAAACTTGGACTCTTCCAGTAACACAGTGACTCTAAATGGACAAAATGTGCAGTCTGAAGACactgctgtgtattactgtgccagGAGAGCCACAGCAACACAAACCAtcaGAGATATCAATATAGAGGAGACTTAG

Function


GO: NA

KEGG:

id description
ko05140 Leishmaniasis
ko05310 Asthma

RNA


RNA id representative length rna type GC content exon number start site end site
TU208046 False 362 TUCP 0.47 2 9651417 9651867
unassigned_transcript_809 True 413 V_gene_segment 0.46 3 9648662 9651866

Neighbor


gene id symbol gene type direction distance location
LOC120574373 NA coding downstream 211796 9435292 ~ 9436866 (-)
LOC120574659 NA coding downstream 223616 9424509 ~ 9425046 (-)
LOC120574660 NA coding downstream 227964 9420152 ~ 9420698 (-)
LOC120574369 NA coding downstream 240180 9407854 ~ 9408482 (-)
LOC120574368 NA coding downstream 241858 9391565 ~ 9406804 (-)
cacna1aa NA coding upstream 409419 10061286 ~ 10149482 (-)
gtf2f1 gtf2f1 coding upstream 514845 10166712 ~ 10176011 (-)
luc7l3 luc7l3,LOC102798435 coding upstream 957131 10608998 ~ 10618057 (-)
LOC120574864 tob1 coding upstream 1021475 10673342 ~ 10677290 (-)
spag9a NA coding upstream 1087041 10738908 ~ 10772253 (-)
G153481 NA non-coding downstream 45556 9602857 ~ 9603106 (-)
G153539 NA non-coding downstream 100357 9542118 ~ 9548305 (-)
G153456 NA non-coding downstream 147195 9199658 ~ 9501467 (-)
G153588 NA non-coding upstream 100392 9752259 ~ 9798267 (-)
G153591 NA non-coding upstream 127422 9779289 ~ 9782563 (-)
G153597 NA non-coding upstream 142225 9794092 ~ 9842982 (-)
G153596 NA non-coding upstream 255373 9907240 ~ 10018859 (-)
G153622 NA non-coding upstream 366999 10018866 ~ 10019266 (-)
LOC120574589 NA other downstream 480 9647635 ~ 9648182 (-)
LOC120574596 NA other downstream 2064 9646086 ~ 9646598 (-)
LOC120574602 NA other downstream 7725 9640387 ~ 9640937 (-)
G153567 NA other downstream 7738 9624969 ~ 9640924 (-)
LOC120574388 NA other downstream 17856 9626074 ~ 9630806 (-)
G153574 NA other upstream 2456 9654323 ~ 9678388 (-)
LOC120574391 NA other upstream 3920 9655787 ~ 9656335 (-)
LOC120574614 LOC108239224 other upstream 6484 9658351 ~ 9658824 (-)
LOC120574392 NA other upstream 13548 9665415 ~ 9665957 (-)
LOC120574622 NA other upstream 14507 9666374 ~ 9667050 (-)

Expression



Co-expression Network