G153579


Basic Information

Item Value
gene id G153579
gene name NA
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9676224 ~ 9681747 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU208059
GCTATAAAGACTTGATATCATGCTGTCAGTTgcagcagaagaagagaagctCCCATCAGATCACCTTCAATAGCAACCATGTTCTCtgtagctctgctgctgctgctggctgctggatCCTgtgtgaagtgtgaacagcTGACCCAGCCAGCCTCTGTGACTGTGCAGCCAGGTCAACGTCTGACCATCACCTGTCAGGTCTCTTATTCTGTTGGTAGCTATCGCacagcttggatcagacagcctgcaggaaaaggactggagtggattgTAATAGGAGGTGTTGGATACACCACATATTACAAAGATTCgctgaagaacaagttcagtatcAGCTTTGACTCTTCCAGCAACACAGTGACTCTAAATGGACAGAATGTGCAGCCTGAAGACactgctgtgtattactgtgccagagagc
>TU208060
GCTATAAAGACTTGATATCATGCTGTCAGTTgcagcagaagaagagaagctCCCATCAGATCACCTTCAATAGCAACCATGTTCTCtgtagctctgctgctgctgctggctgctggatCCTgtgtgaagtgtgaacagtTGACCCAGCCAGCCTCTGTGACTGTGCAGCCAGGTCAACGTCTGACCATCACCTGTCAGGTCTCTTATTCTCTGAGCAGctactacacagcttggatTAGACAGCCTGCAGGGAAAGGACCGGAGTGGATTGGATATGGCTGTGCTGGGTGCACCACATACTACAAAGATTCACTGAAGAACACGTTCAGTATCAGCTTTGACTCTTCCAGCAAGACAGTGACTCTAAATGGACAGAATGTGCAGCCTGAAGACACTGCTGTATATTACTGTGCCAGAG
>TU208061
GCTATAAAGACTTGATATCATGCTGTCAGTTgcagcagaagaagagaagctCCCATCAGATCACCTTCAATAGCAACCATGTTCTCtgtagctctgctgctgctgctggctgctggatCCTgtgtgaagtgtgaacagtTGACCCAGCCAGCCTCTGTGACTGTGCAGCCAGGTCAACGTCTGACCATCACCTGTCAGGTCTCTTATTCTCTGAGCAGctactacacagcttggatTAGACAGCCTGCAGGGAAAGGACCGGAGTGGATTGGATATGGCTGTGCTGGGTGCACCACATACTACAAAGATTCACTGAAGAACACGTTCAGTATCAGCTTTGACTCTTCCAGCAAGACAGTGACTCTAAATGGACAGAATGTGCAGCCTGAAGACACTGCTGTATATTACTGTGCCAGAG

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway
ko04145 Phagosome
ko04664 Fc epsilon RI signaling pathway
ko05140 Leishmaniasis
ko05310 Asthma

RNA

RNA id representative length rna type GC content exon number start site end site
TU208059 True 421 TUCP 0.48 2 9681230 9681747
TU208060 False 418 TUCP 0.49 2 9676224 9676738
TU208061 False 418 TUCP 0.49 2 9676224 9681747

Neighbor

gene id symbol gene type direction distance location
LOC120574373 NA coding downstream 239358 9435292 ~ 9436866 (-)
LOC120574659 NA coding downstream 251178 9424509 ~ 9425046 (-)
LOC120574660 NA coding downstream 255526 9420152 ~ 9420698 (-)
LOC120574369 NA coding downstream 267742 9407854 ~ 9408482 (-)
LOC120574368 NA coding downstream 269420 9391565 ~ 9406804 (-)
cacna1aa NA coding upstream 379539 10061286 ~ 10149482 (-)
gtf2f1 gtf2f1 coding upstream 484965 10166712 ~ 10176011 (-)
luc7l3 luc7l3,LOC102798435 coding upstream 927251 10608998 ~ 10618057 (-)
LOC120574864 tob1 coding upstream 991595 10673342 ~ 10677290 (-)
spag9a NA coding upstream 1057161 10738908 ~ 10772253 (-)
G153481 NA non-coding downstream 73118 9602857 ~ 9603106 (-)
G153539 NA non-coding downstream 127919 9542118 ~ 9548305 (-)
G153456 NA non-coding downstream 174757 9199658 ~ 9501467 (-)
G153588 NA non-coding upstream 70512 9752259 ~ 9798267 (-)
G153591 NA non-coding upstream 97542 9779289 ~ 9782563 (-)
G153597 NA non-coding upstream 112345 9794092 ~ 9842982 (-)
G153596 NA non-coding upstream 225493 9907240 ~ 10018859 (-)
G153622 NA non-coding upstream 337119 10018866 ~ 10019266 (-)
G153571 LOC106526304 other downstream 1120 9674603 ~ 9675104 (-)
LOC120574393 NA other downstream 2257 9673422 ~ 9673967 (-)
G153471 NA other downstream 4177 9671455 ~ 9672047 (-)
G153483 LOC108239224 other downstream 8005 9667762 ~ 9668219 (-)
LOC120574622 NA other downstream 9174 9666374 ~ 9667050 (-)
LOC120574592 NA other upstream 3649 9685396 ~ 9686048 (-)
LOC120574579 NA other upstream 15896 9697643 ~ 9739305 (-)
G153584 NA other upstream 40434 9722181 ~ 9722624 (-)
LOC120574633 LOC102776372 other upstream 48863 9730610 ~ 9731240 (-)
LOC120574609 NA other upstream 50939 9732686 ~ 9733195 (-)

Expression


Co-expression Network