G153943 (LOC104934589,LOC102791985)


Basic Information

Item Value
gene id G153943
gene name LOC104934589,LOC102791985
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 11033206 ~ 11035516 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU208584
AAAAAAATGCATGTTTCACATGACAGGAATGACTAATTTGTGCTAGCGTGTGTGTATATCAGAAAGCATATCTGTGCACTGTACATTGTTGACACATTGGCAGAATTTTCAAGCCTTGCTTACTGGTATAATCCTGCGGTGACATGGGCCTGGACAGGACTTGTCTGAGGGCGTCCAGCCACTCTCTCTGCTCCCTCTCCTGCTCGCACATGAAGACAAATTGTCGCTCGGGCGTCCCCACCATAACACCACACTTCCACCTGTTTCCCCGAGAATGCTTTGGGACACACTCCTTCACAGAGTAACCTTTGTTTGTGGGGCCGATGAAAATGACCCCTAACTCCTCTGCATCCTACTTTGACAATAATGACACACATTCAAACAGAATGGTGGGTAAAGTTCTTGACAAACATCCTCACAGCAATGCAAAGCATGAAAAGTCCATACCAGCTGGCCTTTGAAGTAGAACAACTTCCTGTTTTGAGAGTCCAAAATAAACCACCTCTTTTTGAATGGCTCCTTTTCGATGGCCCTGTCTTTTCCATGTATCCCTCTTTGATGTAGTTTCTTGTTATCTTTGGTATTAGCTGACAAAGAGGCGTAAAGGAACACGTTTAAAACATAAAAGCGAAAAGAGGCAAGTTTCTATTATTATTGCGTTTGACTGCTGAAAGTTAAAGTTCACTACATTAACTGGGAATAAACTGAAATATGTCTTTAAGTATTTAGAGTGCATTTCAAATTCATCAACATCTAGGAGACATTTTGTCAGTTTATTCGGTTTTGAGAAGGTTTGATGCCTACTTCTTCATCGCTTCCAGTTGGGTACGCTGTCTTCAAGTACGCATAGCGAGCAGCACGAATGGCATTGTACCATGTCACTATTTCCTAGAGTAGAAGAAGAGACTTTGAGCTTCATGACAatcaatatatgtatatgtatatatatatatatatatatatatatatatatatatatatatatatatcatctaAAGTATAAATAACAGTAAccagcaaatatatatataaaactttaGATTTAGACCTGCAGGGGCTGAAACTACAACCGATCAATGCTCCGGTCAGTTTTGTAATAGTATGACTTAGTCGCAGCTAGTACAATACAAAGAAATGTTTGCTGTAACACATAAAGGTGaaaaagagatattttgcttACATTTTTTTGACGAGTTAGATATGAAGATCAGTACTACTCTCATGTCTCTGCATTGAAGCCAGGAAGCAATGAGCTTAGTTTAGTTAACGAATGGAAGCAGGGGGAATCAGCAGGCCTTCTGTCCAGAGTTTAAAAATGTGCCTactagcacctctaaagctccgAAATAGTTAAAGCACGTAACTATACCGACATAGCAATTAATGCTGGTTACTGTTATTTATACTTTAGATGATCATGCGCTCCCACCTCCGGACTCTCGTGATAAACATAGAGGTTCCTGGTGTGATCGTCTGCTTGGTAACTGATCTGCAGCCCATGAGGATGACCAATCTTCTCTGGTTGAAAGGTGGCGTTTAGGTCTTTGACGGAGATTACAGCTTTAGGGCCTTTGGACTCCTGGATCACACATTTATAAATGTGCACATTAGAGTTTTTAGAAATTTCACAACAACTGGATTAAATTAGCACGGGGCTGTTTGTACACTAATGTTTAGCTCCAATGGCTCAAGTGATGGCAGTGTCGGTCAGCCAGTCCACCACTCTGGTCTGGACTGAAATAACTCAAAAACgtctggatggattgccataaaATTGGGTGCAGACATTCAATGCCCCAAatgatgaattgtaataactttgatcccctgacctttcctctagcaccatcatcaggtcaaaattgtaGGTTGTCcagtactttggtttatgaccaaatacttgcaaaactaatgacactCCTATCAACTGTTcttgtttagtgctaattagcaaatatcAGTTTGCTAACACTGAGA

Function

NR:

description
PREDICTED: arf-GAP with dual PH domain-containing protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU208584 True 1977 lncRNA 0.40 2 11033206 11035516

Neighbor

gene id symbol gene type direction distance location
LOC120574053 LOC104934592,LOC103360693 coding downstream 16615 11008642 ~ 11016591 (-)
rln3a LOC104944611,LOC103360695 coding downstream 39176 10988167 ~ 10994030 (-)
il12rb2l NA coding downstream 46046 10975641 ~ 10987160 (-)
LOC120575016 tnpo2,LOC103360699 coding downstream 63450 10954170 ~ 10969756 (-)
LOC120575512 NA coding downstream 65032 10968106 ~ 10968174 (-)
c15h17orf75 clg4h17orf75,clg8h17orf75,LOC102789701,LOC101467397,LOC102229770,LOC106934014,LOC106960136 coding upstream 22376 11057892 ~ 11063850 (-)
LOC120574485 NA coding upstream 46203 11081719 ~ 11084573 (-)
LOC120574065 NA coding upstream 137005 11172521 ~ 11263721 (-)
LOC120573949 NA coding upstream 254350 11289866 ~ 11293711 (-)
LOC120573873 hn1 coding upstream 263691 11299207 ~ 11309655 (-)
G153950 NA non-coding downstream 73685 10950571 ~ 10959521 (-)
G153937 NA non-coding downstream 125598 10905355 ~ 10907608 (-)
G153734 NA non-coding downstream 438199 10594743 ~ 10595007 (-)
G153671 NA non-coding downstream 739040 10286635 ~ 10294166 (-)
G153663 NA non-coding downstream 863767 10163444 ~ 10169439 (-)
G153987 NA non-coding upstream 33527 11069043 ~ 11073776 (-)
G154036 NA non-coding upstream 236303 11271819 ~ 11272848 (-)
G154088 NA non-coding upstream 316687 11352203 ~ 11352565 (-)
G154115 NA non-coding upstream 431392 11466908 ~ 11467112 (-)
G154163 bri3,LOC104946088,LOC103141671 non-coding upstream 494180 11529696 ~ 11557733 (-)
LOC120574455 NA other downstream 241641 10784112 ~ 10791565 (-)
gtpbp1 gtpbp1,LOC104924447,LOC102799794 other downstream 643030 10352158 ~ 10390176 (-)
LOC120574648 NA other downstream 1210213 9822145 ~ 9822993 (-)
LOC120574583 NA other downstream 1296372 9735626 ~ 9736834 (-)
LOC120574609 NA other downstream 1300011 9732686 ~ 9733195 (-)
LOC120574486 NA other upstream 43029 11078545 ~ 11080607 (-)
tnrc6c1 LOC103361861 other upstream 62800 11098316 ~ 11137528 (-)
G154033 NA other upstream 167934 11203450 ~ 11225546 (-)
LOC120574419 NA other upstream 1050469 12085985 ~ 12090981 (-)
cep112 NA other upstream 1391988 12427504 ~ 12565471 (-)

Expression


Co-expression Network