LOC120574419


Basic Information

Item Value
gene id LOC120574419
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12085985 ~ 12090981 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU209010
GCTTAAAGTTATTTAACGTTAGCGTtactgttaacgttagctagcaagtTATCGTAGACTCTACTTTTGCTTATCAGTACAAGTTAaccatacattttaaataaatggcaATACGTTAAAGTAATGTTAATGCAGATACCTGGTTGAAAATGGTCTTTATAGACCTCGCCACCGAAGAAACTACAAAACGACATCCCTCCGCTCTCCGGGTAGTAGTTATGTAGCTACAGCGGCTTCTCTTCTCTGGACCGGAAGAAGAGAAGTCCCGCTGGCAACGAGAGTCcggccttcaaaataaaaccagatAACTTAAAAAGGACAGTTCAGCCCTGTTGAAAAGCATATTTTTCATCGTACGCTGCGGCGCCTTCACTGACCATCAGCCCAGTGGTACGGGGAGATGAATGTGATGCCCCACTGCTGCAGGAGAACACTGGTCCCTCAACACCAGAAGAGTCCAACTTCAGTCTTGGTGCTGAGGTGCCCGGACCCTCTCAAATCAGTGCAGATCTGGACAATAATAACTGGAACTACTGTTTGGTTCAAACAGACTTCAAAATGTTGGAGATAAAAGAAGAGCAGGAGGGACAAGAACAACATGGGAACCTTAATGAAAAGGACCAAGCAGCATTGCCTCTTACAAAAAGTTCTGCTAAAATTGAAAAggaatgcattttttgccattttGGGGCAAGGGATTCCAGTACATCTGGTTTTTAATGAACCACATGAAAACACATGAGAAACATTGCTTGTGGGATGACATGCCAGTCCATACACGAGCTGATAACTCGTGTGAAAAGTTGTCACAACGATACACATTTTTGTGACGTTTGCCAGTATGCGCTGTGTCCGGCTGCATGAAGTATGGCACAAAGGCCTTAAATTTATGTGTCAAGTATGTGGCAAGACATTTTCCCAACAAGAGTCTGGCTGTGCATGTCAGAAACCGTATCAATGTGGCTTTTGTGACAAAAGTTTTATTACTAGTGGTAACCTCAAAGTACACATGAGATACCATCCAGGAGAAAAACCGTTCCCATGTGATATTTGCAGTAAACGTTTTGCAGATGGGCTAAGATGACTTGACATAGGACTTCACATACAGGAGAATGCCATATGTTGCCATGTTTGTGTTATGAGATACAGATTTCCAGTTGATTTAAAGTTGCACCTGCAAAAAAAGGCAGCCTCTGACTGAAAACGGTTATATTAAACAGGCAGACCATGTCTGAGCTCACCGTAAATTCTCAAGTAGTAGCTGGGCCCTTTAGTAGTTGTAGTGTAGTTACAATAGTGGTTGTCTTTGTTACCCGTTCATTTCAAAAGTGGACTGATCACCCATTAAATGTTCCCCTTTGACTTGAGTTTGTTCAGGcagattttgtcttttttaggTCAGTTTAGCCTGTTCTGTCTGTTTGTTAAGTTAGCATAGTCTGAGTTAAATTCTGTTCAGTTGACCTGTTTTATG
>TU209013
CTTTAGGGACAAACTTCAGTGAGCTGCTGAATATTCAGAAGCGAGAAACCCCTTTGGCTGGCCCATCATTCACAAACTCGTGGCCTAGTCCATTTCCACATTTCCCACACCGCACCTTATGCCCCAGGTCTCTCCTCATGTTTAGACACACTGTCCTCATGGATTGTCTGTGTGAAGGCTGGCCAGGGAGAGGAGTGTTCGTACTTGGAGCGGCTGTTGAACAGCTGATGATCACACTTGGAGCATACATAAACCCCTGAGGAGTGAAGGATGAGATGATGCTGCAGAGCCTTCACTGACCATCAGCCCAGTGGTACGTGGAGAAGAATGTGATGCCCCACTGCTGCAGGAGAACACTGGTCCCTCAACACCAGAAAAGTCCAACTTCAGTTTGGGTGCTGAGGTGCCG
>XM_039824677.1
CGTTGGTGTGTCCCTAGCTAACTCTCTCCGGAGACATGGACACCACAATGATTCAGCTCAGGTTGTTTGTCCATCAAAGGCTGTACACAGCGGCAGAAGAGATCCTCGGAGAGGTGGAGAAAACTATAACGTTAGCTTTGCACGAAGCCGAAGTCAGTCAATCTGAAGGGCTCAGAAGTCTGCGAcatcagctaacgttagacctcTTGCGAAAACAATCAGCTGCGGCGCCTTCACTGACCATCAGCCCAGTGGTACGGGGAGATGAATGTGATGCCCCACTGCTGCAGGAGAACACTGGTCCCTCAACACCAGAAGAGTCCAACTTCAGTCTTGGTGCTGAGGTGCCCGGACCCTCTCAAATCAGTGCAGATCTGGACAATAATAACTGGAACTACTGCTTGGTTCAGACAGACTTCAAGATGTTAGAgataaaagaagaacaggaggaACTTGGGGATGACAGTCAAACACAAGAGATGGTTTTTCCTTCTCCGGAAATTGTGAAAAGCGAGCAAGATCAGCCAGAGACAGAACTATCATATGAATTGCAGCCAGTTTCTTCAGACTGCTCTGCAGCTCAGAGTGAGAACAGTGACCGTGATGAGGAGTTGGTTACCAGCAAAGAACAgaagaaaacagtaaaaaggaaaggaaagatgTTGCAAAAGCGAAGTGGCAACATGAATGAGAAGGCAGCATTGCCTCATGACAAAAGTTCTGCTAAAAGTGAAAAAGAACACagtttttgccatttttgtgGCAAGGGATTTCAGTACATTGGCTCTTTGATGAAGCACATAAAAACGCATCAGAACAATTTTGATTGCACGGTTTGTGGGATGACATGCCAGTCAACAGAGCCGCTGATAGCCCATTTGAAAAGTTGTCACAATAAAAAATGGGTTTGCGATGTTTGTTGCAAGCATTTTTCCAAAATTGGTTTTCTCCGGGTGCATCAAAGAAGAATGAAACACAAAGCTGCAGAGCCTTCACTGACCATCAGCCCAGTGGTACGTGGAGAAGAATGTGATGCCCCACTGCTGCAGGAGAACACTGGTCCCTCAACACCAGAAAAGTCCAACTTCAGTTTGGGTGCTGAGGTGCCGTATAGAATTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU209010 True 1474 lncRNA 0.42 3 12085985 12090019
TU209013 False 409 lncRNA 0.52 3 12087003 12090981
XM_039824677.1 False 1121 mRNA 0.46 3 12086991 12089481

Neighbor

gene id symbol gene type direction distance location
LOC120574725 NA coding downstream 2281 12080475 ~ 12083704 (-)
LOC120573975 LOC104957814,LOC103361744 coding downstream 10168 12062780 ~ 12075817 (-)
ndufb10 ndufb10 coding downstream 28184 12055838 ~ 12057801 (-)
tbl3 tbl3 coding downstream 36715 12028027 ~ 12049270 (-)
LOC120574261 tom1l2,LOC104918838,LOC103361751,LOC100706850,LOC102776585 coding downstream 77449 11984719 ~ 12008536 (-)
fahd1 fahd1 coding upstream 36486 12127467 ~ 12128598 (-)
narfl narfl coding upstream 47087 12138068 ~ 12142317 (-)
arhgap17b LOC103361731,LOC100693200,LOC102795553,LOC101468818 coding upstream 95116 12186097 ~ 12213659 (-)
LOC120573971 LOC104964789,LOC103361754 coding upstream 130188 12221169 ~ 12226568 (-)
cbx4 cbx4,LOC102794988,LOC102309824,LOC102204981,LOC101467610 coding upstream 138136 12229117 ~ 12244745 (-)
G154248 rps2 non-coding downstream 30781 12052806 ~ 12055204 (-)
G154246 NA non-coding downstream 63481 12022297 ~ 12022504 (-)
G154245 NA non-coding downstream 63795 12021527 ~ 12022190 (-)
G154231 NA non-coding downstream 73505 11969405 ~ 12012480 (-)
G154187 NA non-coding downstream 255802 11829944 ~ 11830183 (-)
G154275 NA non-coding upstream 40405 12131386 ~ 12155812 (-)
G154305 slc5a11,LOC102796461 non-coding upstream 92630 12183611 ~ 12183825 (-)
LOC120574757 NA non-coding upstream 270258 12361239 ~ 12373994 (-)
G154368 NA non-coding upstream 309271 12400252 ~ 12401475 (-)
LOC120574719 NA non-coding upstream 476197 12567178 ~ 12567810 (-)
G154033 NA other downstream 860439 11203450 ~ 11225546 (-)
tnrc6c1 LOC103361861 other downstream 948457 11098316 ~ 11137528 (-)
LOC120574486 NA other downstream 1005378 11078545 ~ 11080607 (-)
LOC120574455 NA other downstream 1294420 10784112 ~ 10791565 (-)
gtpbp1 gtpbp1,LOC104924447,LOC102799794 other downstream 1695809 10352158 ~ 10390176 (-)
cep112 NA other upstream 336523 12427504 ~ 12565471 (-)
LOC120575506 LOC100697827 other upstream 644463 12735444 ~ 12737483 (-)
iqck NA other upstream 863993 12954974 ~ 12972829 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other upstream 882279 12973260 ~ 13012781 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other upstream 1244468 13335449 ~ 13421951 (-)

Expression


Co-expression Network