G154305 (slc5a11,LOC102796461)


Basic Information

Item Value
gene id G154305
gene name slc5a11,LOC102796461
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12183611 ~ 12183825 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU209066
CTGCTCCGGTTTGGGCTCctctgtagccaggctgactaCAACCACCACAACTAGGGTGATGAAGGACAGCAACATGGAGAAGTATAGGTAATGGACGTATTTCAACACCCCGGGCCTGTCATCCACCTCGTAGCACAGGGGCGCAGGGTAAATGAAGTCCAACACCATGCGGATGCAGCCCACCAACAGGCCGACAGCCAGGCCCCAGAATGCAC

Function

symbol description
slc5a11 Predicted to enable glucose:sodium symporter activity. Predicted to act upstream of or within transmembrane transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. Predicted to be integral component of membrane. Orthologous to human SLC5A11 (solute carrier family 5 member 11).

NR:

description
PREDICTED: sodium/myo-inositol cotransporter 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU209066 True 215 lncRNA 0.57 1 12183611 12183825

Neighbor

gene id symbol gene type direction distance location
narfl narfl coding downstream 41294 12138068 ~ 12142317 (-)
fahd1 fahd1 coding downstream 55013 12127467 ~ 12128598 (-)
LOC120574725 NA coding downstream 99907 12080475 ~ 12083704 (-)
LOC120573975 LOC104957814,LOC103361744 coding downstream 107794 12062780 ~ 12075817 (-)
ndufb10 ndufb10 coding downstream 125810 12055838 ~ 12057801 (-)
arhgap17b LOC103361731,LOC100693200,LOC102795553,LOC101468818 coding upstream 2272 12186097 ~ 12213659 (-)
LOC120573971 LOC104964789,LOC103361754 coding upstream 37344 12221169 ~ 12226568 (-)
cbx4 cbx4,LOC102794988,LOC102309824,LOC102204981,LOC101467610 coding upstream 45292 12229117 ~ 12244745 (-)
tbc1d16 tbc1d16 coding upstream 91542 12275367 ~ 12297433 (-)
gaa gaa coding upstream 114492 12298317 ~ 12307166 (-)
G154275 NA non-coding downstream 27799 12131386 ~ 12155812 (-)
G154248 rps2 non-coding downstream 128407 12052806 ~ 12055204 (-)
G154246 NA non-coding downstream 161107 12022297 ~ 12022504 (-)
G154245 NA non-coding downstream 161421 12021527 ~ 12022190 (-)
G154231 NA non-coding downstream 171131 11969405 ~ 12012480 (-)
LOC120574757 NA non-coding upstream 177414 12361239 ~ 12373994 (-)
G154368 NA non-coding upstream 216427 12400252 ~ 12401475 (-)
LOC120574719 NA non-coding upstream 383353 12567178 ~ 12567810 (-)
LOC120574718 NA non-coding upstream 384394 12568219 ~ 12568696 (-)
LOC120574720 NA non-coding upstream 493668 12677493 ~ 12679110 (-)
LOC120574419 NA other downstream 92630 12085985 ~ 12090981 (-)
G154033 NA other downstream 958065 11203450 ~ 11225546 (-)
tnrc6c1 LOC103361861 other downstream 1046083 11098316 ~ 11137528 (-)
LOC120574486 NA other downstream 1103004 11078545 ~ 11080607 (-)
LOC120574455 NA other downstream 1392046 10784112 ~ 10791565 (-)
cep112 NA other upstream 243679 12427504 ~ 12565471 (-)
LOC120575506 LOC100697827 other upstream 551619 12735444 ~ 12737483 (-)
iqck NA other upstream 771149 12954974 ~ 12972829 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other upstream 789435 12973260 ~ 13012781 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other upstream 1151624 13335449 ~ 13421951 (-)

Expression


Co-expression Network