G154368


Basic Information

Item Value
gene id G154368
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12400252 ~ 12401475 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU209165
GCTTGCGTCCCTGGCTGGGCGTGGGTCAGAGCCGGAGTAAACAAACCCACAGCTTAGCAGCGCGTTTGATCTGTTCAACTGCGAAACACTGAGTGGAGTAAACAGAAAAATTAGACTGGGTCAGCtacacaccaaaacaagttgGATGTTCCAAACCAAAAGCAAACGGTAGGGGGTTCTCACCATGGTCTGTGATGACCACTTTTCAGCATCTCAAACTGAGTCTGTCATCACTTATTTTAGGTGTTAATGAAACATGGTGCCTTCTTCCAAAGTGAGCTTTTGAATTAGACAAGGATGTTACTATACCAGCTGAGTTCAACTGATTCCAATTTTGCTTGTGTTTATAGGATTGTGGCATGTTACAGGATTGTTTATTTATCAGACTAAAAAAGCTTGTGGAATGTATCTAACTCTCTCCTCGTACAcatgggggggttggggggtagaTGAACAAAAAAAGGTTGTTCAAGAGTCGGATCGCTAGTGGCGGTTGAACGACACAAACTAGGTCGCTAGTTCACTCatccctagtctatatccacgactttccaattccgggattgctccggtgctggcggattcactcttttcggccggatgtccgttaccttctgctttctttgtgttgtaattttaaactccagtggatttctgaggactatggttaactgctcctcagatctctgcagggtaaatccagacagctagctagactatctgtccaatctgagttttctgctgcatgactaaaacaacttttgaacgtacacgttccaccaaaccaagttccttcccgaggctattttgcagcggcaccgtggctccgtccggcgcttagcaccggccaagacgattgtgattggtttaaagaaatgccaataaaccagagcttgTTTTTCTCCcgtcccggaatgctgtgtggactagccagaccgtcctccgcagcgctgtggagggcATCACTAACAGCATTACTCACTTGTTCAAACATCATACCCTGACCTTTATGTCAACCAATCAATAGTTAtttgtctctcttagttacctgttatagttacgctgttatagttctagactgccgggggacttccttcctttgacacactgagctgctctctcatctccctttctattactgttactattactattactattactatttgtgtgcagcccg
>TU209168
AGATGAAAAGCAAAAAATGCCAAATGTGGAAAAAGAGCTGCAGTGCTTGCGTCCCTGGCTGGGCGTGGGTCAGAGCCGGAGTAAACAAACCCACAGCTTAGCAGCGCGTTTGATCTGTTCAACTGCGAAACACTGAGTGGAGTAAACAGAAAAATTAGACTGGGTCAGCtacacaccaaaacaagttgGATGTTCCAAACCAAAAGCAAACGGTAGGGGGTTCTCACCATGGTCTGTGATGACCACTTTTCAGCATCTCAAACTGAGTCTGTCATCACTTATTTTAGGTGTTAATGAAACATGGTGCCTTCTTCCAAAGTGAGCTTTTGAATTAGACAAGGATGTTACTATACCAGCTGAGTTCAACTGATTCCAATTTTGCTTGTGTTTATAGGATTGTGGCATGTTACAGGATTGTTTATTTATCAGACTAAAAAAGCTTGTGGAATGTATCTAACTCTCTCCTCGTACAcatgggggggttggggggtagaTGAACAAAAAAAGGTTGTTCAAGAGTCGGATCGCTAGTGGCGGTTGAACGACACAAACTAGGTCGCTAGTTCACTCatccctagtctatatccacgactttccaattccgggattgctccggtgctggcggattcactcttttcggccggatgtccgttaccttctgctttctttgtgttgtaattttaaactccagtggatttctgaggactatggttaactgctcctcagatctctgcagggtaaatccagacagctagctagactatctgtccaatctgagttttctgctgcatgactaaaacaacttttgaacgtacacgttccaccaaaccaagttccttcccgaggctattttgcagcggcaccgtggctccgtccggcgcttagcaccggccaagacgattgtgattggtttaaagaaatgccaataaaccagagcttgTTTTTCTCCcgtcccggaatgctgtgtggactagccagaccgtcctccgcagcgctgtggagggcATCACTAACAGCATTACTCACTTGTTCAAACATCATACCCTGACCTTTATGTCAACCAATCAATAGTTAtttgtctctcttagttacctgttatagttacgctgttatagttctagactgccgggggacttccttcctttgacacactgagctgctctctcatctccctttctattactgttactattactattactattactatttgtgtgcagcccg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU209165 False 1180 lncRNA 0.45 1 12400252 12401431
TU209168 True 1224 lncRNA 0.45 1 12400252 12401475

Neighbor

gene id symbol gene type direction distance location
tex2 LOC103361461 coding downstream 43160 12342804 ~ 12357092 (-)
LOC120574755 ern1 coding downstream 58969 12320594 ~ 12341283 (-)
samd9l LOC102078066,LOC102793943,LOC102205815,LOC102308574,LOC101466743 coding downstream 79988 12309749 ~ 12320264 (-)
gaa gaa coding downstream 93086 12298317 ~ 12307166 (-)
tbc1d16 tbc1d16 coding downstream 102819 12275367 ~ 12297433 (-)
axin2 LOC103361462 coding upstream 11956 12413431 ~ 12427506 (-)
LOC120575015 LOC103393018,LOC102303741,LOC101486233,LOC102226583,LOC106518738,LOC108437157,LOC108239256 coding upstream 293410 12694885 ~ 12727024 (-)
LOC120574004 stk19 coding upstream 345342 12746817 ~ 12749160 (-)
LOC120574003 LOC104947694,LOC103373535,LOC108239260,LOC101158446,LOC103141614 coding upstream 351995 12753470 ~ 12760056 (-)
trnal-uag_2 NA coding upstream 441418 12842893 ~ 12842974 (-)
LOC120574757 NA non-coding downstream 26258 12361239 ~ 12373994 (-)
G154305 slc5a11,LOC102796461 non-coding downstream 216427 12183611 ~ 12183825 (-)
G154275 NA non-coding downstream 244440 12131386 ~ 12155812 (-)
G154248 rps2 non-coding downstream 345048 12052806 ~ 12055204 (-)
G154246 NA non-coding downstream 377748 12022297 ~ 12022504 (-)
LOC120574719 NA non-coding upstream 165703 12567178 ~ 12567810 (-)
LOC120574718 NA non-coding upstream 166744 12568219 ~ 12568696 (-)
LOC120574720 NA non-coding upstream 276018 12677493 ~ 12679110 (-)
G154437 LOC104947690 non-coding upstream 365223 12766698 ~ 12768603 (-)
G154438 NA non-coding upstream 367934 12769409 ~ 12770122 (-)
LOC120574419 NA other downstream 309271 12085985 ~ 12090981 (-)
G154033 NA other downstream 1174706 11203450 ~ 11225546 (-)
tnrc6c1 LOC103361861 other downstream 1262724 11098316 ~ 11137528 (-)
LOC120574486 NA other downstream 1319645 11078545 ~ 11080607 (-)
LOC120574455 NA other downstream 1608687 10784112 ~ 10791565 (-)
cep112 NA other upstream 26029 12427504 ~ 12565471 (-)
LOC120575506 LOC100697827 other upstream 333969 12735444 ~ 12737483 (-)
iqck NA other upstream 553499 12954974 ~ 12972829 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other upstream 571785 12973260 ~ 13012781 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other upstream 933974 13335449 ~ 13421951 (-)

Expression


Co-expression Network