LOC120574214 (bahcc1,LOC106528540,LOC108241329,LOC107083174)


Basic Information

Item Value
gene id LOC120574214
gene name bahcc1,LOC106528540,LOC108241329,LOC107083174
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 14795646 ~ 14828239 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU210042
TCCGAGCCGCGATCCAGCCAGGCCGGAAGACTAGTCCCACTGCTTCCATAGACTGAACCAGCAGGCTACTGCACAGCCTCAGATGGAAATATTGTAGGATTTCTCTCTAGCCACATGgtttatttcaaattttgattttaaatgggCGTCGCACTTGGCCTTGCTCCTTCCCTCCctgtgttttgtgattttttaatttattgttatGCAAGGATTTAACATACCAAAAAGATGATCGGGGGCTGCGTTATTGGCTGGGGAAGCCTGCGATCGACTGAATGCAACACATAGATCTGAAGGAAAGGATTATTTTATGGgttgcatttgatttttctgaCCTGCCCTATCCGGATTTCGGATTACTCAACATTCTTCGGAATGGAAGGACGGGATTTCGCTGCTCCGGCGCACCTCCTATCAGAGCGGGGCGCCTTGGTGCACCGAGCCGCCTCTCGGATCGCTCCCTCGGGCCACGGCTCTGTACAGCACGGCGGTCACTTCACGCCAGGGAAATACTACCCCTCGCACATACCAATGGCTCCCCACTCAGGCAGTGGATTGATGGGCAATTCCTCCGCCTCCTTCATGGGGACCTTTCTGGCCAGTAGTCTGGGTTCCCCCCCTTCCCACCCGTCTCACCCTTCCCGGCCGCCCTCCTCGCCGTCCTCACCCTCCTTCCGGGGCGGCCCCCACTCCAGCGCCTCGCAAATCTGGTTTCCCCATTCGCATGAAGGTACCTCAAATCacaccatgcacacaaacacatgcccCTCATTTGACGACATTGTCTGCATCAGGCACTATTCATGTCTAGGCAGTATCGGGGAC
>XM_039824441.1
AGAAACCGCTGCTCGGAGATCCGAGCCGCGATCCAGCCAGGCCGGAAGACTAGTCCCACTGCTTCCATAGACTGAACCAGCAGGCTACTGCACAGCCTCAGATGGAAATATTGTAGGATTTCTCTCTAGCCACATGgtttatttcaaattttgattttaaatgggCGTCGCACTTGGCCTTGCTCCTTCCCTCCctgtgttttgtgattttttaatttattgttatGCAAGGATTTAACATACCAAAAAGATGATCGGGGGCTGCGTTATTGGCTGGGGAAGCCTGCGATCGACTGAATGCAACACATAGATCTGAAGGAAAGGATTATTTTATGGgttgcatttgatttttctgaCCTGCCCTATCCGGATTTCGGATTACTCAACATTCTTCGGAATGGAAGGACGGGATTTCGCTGCTCCGGCGCACCTCCTATCAGAGCGGGGCGCCTTGGTGCACCGAGCCGCCTCTCGGATCGCTCCCTCGGGCCACGGCTCTGTACAGCACGGCGGTCACTTCACGCCAGGGAAATACTACCCCTCGCACATACCAATGGCTCCCCACTCAGGCAGTGGATTGATGGGCAATTCCTCCGCCTCCTTCATGGGGACCTTTCTGGCCAGTAGTCTGGGTTCCCCCCCTTCCCACCCGTCTCACCCTTCCCGGCCGCCCTCCTCGCCGTCCTCACCCTCCTTCCGGGGCGGCCCCCACTCCAGCGCCTCGCAAATCTGGTTTCCCCATTCGCATGAAGGTACCTCAAATCacaccatgcacacaaacacatgcccCTCATTTGACGACATTGTCTGCATCAGGCACTATTCATGTCTAGGCAGTATCGGGGACAGAGCTTTGCAGGGTGTATTGTTACTCTGATATTGTGTATTTTTAGGCTGTGTTAGGTTTACAACAAAGCACGGCTTGTAATCATCTAGCAAGAGCCAGGCTCCCACCCTTTTATTTGTGCACCAAAATAGGCCCGGGCCCAGCATGTTTGGGATGGAATACAGTGCCATGGTTTCTAGATGGGGACACAGGGTCAAAAGTTCAGCCAAGGAATCTTGCGGTATTCGATTCACGTCAGCAGGAATGTCACTCAAGACTCTCTGAAGCAGCACGCGTGAACGCGAGCCAGTAAAAAGTTGCAGTGATTGCAGAGCTTTCAGCTGGTGTCTCCATCACTGCTTAATAGGGTAGTTCCCACCCGGCACTCAGGATTATAAAat
>XM_039824442.1
GACGTGTTTCTACCCGAACCGGTCGAGGTGCACTCCCTGCCGGCCAGCTCAGTCATGGAGAGCCGCCTGTCTCGCAGCGCGATCCGACCTCTACAGCAAAAGATGATCGGGGGCTGCGTTATTGGCTGGGGAAGCCTGCGATCGACTGAATGCAACACATAGATCTGAAGGAAAGGATTATTTTATGGgttgcatttgatttttctgaCCTGCCCTATCCGGATTTCGGATTACTCAACATTCTTCGGAATGGAAGGACGGGATTTCGCTGCTCCGGCGCACCTCCTATCAGAGCGGGGCGCCTTGGTGCACCGAGCCGCCTCTCGGATCGCTCCCTCGGGCCACGGCTCTGTACAGCACGGCGGTCACTTCACGCCAGGGAAATACTACCCCTCGCACATACCAATGGCTCCCCACTCAGGCAGTGGATTGATGGGCAATTCCTCCGCCTCCTTCATGGGGACCTTTCTGGCCAGTAGTCTGGGTTCCCCCCCTTCCCACCCGTCTCACCCTTCCCGGCCGCCCTCCTCGCCGTCCTCACCCTCCTTCCGGGGCGGCCCCCACTCCAGCGCCTCGCAAATCTGGTTTCCCCATTCGCATGAAGGTACCTCAAATCacaccatgcacacaaacacatgcccCTCATTTGACGACATTGTCTGCATCAGGCACTATTCATGTCTAGGCAGTATCGGGGACAGAGCTTTGCAGGGTGTATTGTTACTCTGATATTGTGTATTTTTAGGCTGTGTTAGGTTTACAACAAAGCACGGCTTGTAATCATCTAGCAAGAGCCAGGCTCCCACCCTTTTATTTGTGCACCAAAATAGGCCCGGGCCCAGCATGTTTGGGATGGAATACAGTGCCATGGTTTCTAGATGGGGACACAGGGTCAAAAGTTCAGCCAAGGAATCTTGCGGTATTCGATTCACGTCAGCAGGAATGTCACTCAAGACTCTCTGAAGCAGCACGCGTGAACGCGAGCCAGTAAAAAGTTGCAGTGATTGCAGAGCTTTCAGCTGGTGTCTCCATCACTGCTTAATAGGGTAGTTCCCACCCGGCACTCAGGATTATAAAat
>XM_039824443.1
CTGGAGACCCAGCTATCATAAAAGATGATCGGGGGCTGCGTTATTGGCTGGGGAAGCCTGCGATCGACTGAATGCAACACATAGATCTGAAGGAAAGGATTATTTTATGGgttgcatttgatttttctgaCCTGCCCTATCCGGATTTCGGATTACTCAACATTCTTCGGAATGGAAGGACGGGATTTCGCTGCTCCGGCGCACCTCCTATCAGAGCGGGGCGCCTTGGTGCACCGAGCCGCCTCTCGGATCGCTCCCTCGGGCCACGGCTCTGTACAGCACGGCGGTCACTTCACGCCAGGGAAATACTACCCCTCGCACATACCAATGGCTCCCCACTCAGGCAGTGGATTGATGGGCAATTCCTCCGCCTCCTTCATGGGGACCTTTCTGGCCAGTAGTCTGGGTTCCCCCCCTTCCCACCCGTCTCACCCTTCCCGGCCGCCCTCCTCGCCGTCCTCACCCTCCTTCCGGGGCGGCCCCCACTCCAGCGCCTCGCAAATCTGGTTTCCCCATTCGCATGAAGGTACCTCAAATCacaccatgcacacaaacacatgcccCTCATTTGACGACATTGTCTGCATCAGGCACTATTCATGTCTAGGCAGTATCGGGGACAGAGCTTTGCAGGGTGTATTGTTACTCTGATATTGTGTATTTTTAGGCTGTGTTAGGTTTACAACAAAGCACGGCTTGTAATCATCTAGCAAGAGCCAGGCTCCCACCCTTTTATTTGTGCACCAAAATAGGCCCGGGCCCAGCATGTTTGGGATGGAATACAGTGCCATGGTTTCTAGATGGGGACACAGGGTCAAAAGTTCAGCCAAGGAATCTTGCGGTATTCGATTCACGTCAGCAGGAATGTCACTCAAGACTCTCTGAAGCAGCACGCGTGAACGCGAGCCAGTAAAAAGTTGCAGTGATTGCAGAGCTTTCAGCTGGTGTCTCCATCACTGCTTAATAGGGTAGTTCCCACCCGGCACTCAGGATTATAAAat

Function

symbol description
bahcc1 Predicted to enable chromatin binding activity.

NR:

description
PREDICTED: BAH and coiled-coil domain-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210042 False 828 TUCP 0.54 3 14796026 14828220
XM_039824441.1 True 1227 mRNA 0.52 3 14795646 14828239
XM_039824442.1 False 1079 mRNA 0.54 3 14795646 14827389
XM_039824443.1 False 1001 mRNA 0.53 3 14795646 14826872

Neighbor

gene id symbol gene type direction distance location
fscn2a LOC104925063,LOC104962304,LOC103373227,LOC101170272 coding downstream 47616 14740537 ~ 14748030 (-)
LOC120575160 tmem235,LOC104962294,LOC100710065,LOC101469204 coding downstream 65597 14717993 ~ 14730049 (-)
LOC120575183 NA coding downstream 262996 14529438 ~ 14532650 (-)
notum1a notum,LOC104918326 coding downstream 306723 14481337 ~ 14488923 (-)
LOC120575481 myadml2,LOC103373375 coding downstream 316272 14476834 ~ 14479374 (-)
LOC120575176 NA coding upstream 41703 14869942 ~ 14874632 (-)
LOC120575070 map2k6,LOC103373127,LOC100697168,LOC103392800,LOC102787166 coding upstream 108729 14936968 ~ 14950077 (-)
btbd17b LOC103373589,LOC104944234 coding upstream 122025 14950264 ~ 14954273 (-)
ccdc137 ccdc137 coding upstream 136056 14964295 ~ 14969477 (-)
LOC120573908 tspan10 coding upstream 145113 14973352 ~ 14975399 (-)
G154948 LOC104962285,LOC104925065 non-coding downstream 130975 14627750 ~ 14664671 (-)
G154953 cyth1,LOC103392816,LOC101076412 non-coding downstream 148577 14640102 ~ 14647069 (-)
G154952 cyth1,LOC103140955,LOC102194078 non-coding downstream 158844 14633178 ~ 14636802 (-)
LOC120575037 NA non-coding downstream 458572 14330945 ~ 14337074 (-)
G154825 NA non-coding downstream 468710 14325973 ~ 14326936 (-)
G155025 NA non-coding upstream 67140 14895379 ~ 14895624 (-)
G155039 NA non-coding upstream 134994 14963233 ~ 14963846 (-)
G155047 NA non-coding upstream 156895 14985134 ~ 14985364 (-)
G155106 NA non-coding upstream 328190 15156429 ~ 15162435 (-)
G155126 NA non-coding upstream 483841 15312080 ~ 15313592 (-)
LOC120574213 NA other downstream 4868 14765734 ~ 14790778 (-)
LOC120574989 LOC108241285,LOC103373333,LOC106518659 other downstream 251652 14533682 ~ 14543994 (-)
cenpx cenpx other downstream 266493 14526126 ~ 14529153 (-)
LOC120574967 mafg,LOC104918330,LOC108241257,LOC103373400,LOC101487863,LOC106533856 other downstream 324216 14454837 ~ 14471430 (-)
med9 med9 other downstream 738292 14050738 ~ 14057354 (-)
LOC120575102 fam104b,LOC103373210,LOC101470236,LOC107083185,LOC102083140 other upstream 23700 14851939 ~ 14857580 (-)
ush1ga LOC104944226,LOC103373181,LOC103392806,LOC106949104,LOC104925058,LOC103140944 other upstream 51388 14879627 ~ 14889482 (-)
LOC120573849 LOC106675063,LOC102783976,LOC102313472,LOC102290019,LOC102295680 other upstream 174774 15003013 ~ 15008712 (-)
LOC120573850 LOC106674513,LOC106098575 other upstream 181559 15009798 ~ 15010340 (-)
LOC120574278 LOC104940298,LOC103361237,LOC102197797,LOC102781856,LOC104946382 other upstream 278518 15106757 ~ 15139853 (-)

Expression


Co-expression Network