LOC120574432 (LOC103392867,LOC102312066,LOC104952514,LOC105932031,LOC102787456,LOC101484431,LOC102198284)


Basic Information

Item Value
gene id LOC120574432
gene name LOC103392867,LOC102312066,LOC104952514,LOC105932031,LOC102787456,LOC101484431,LOC102198284
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 16230459 ~ 16259025 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU210768
GACAACGAGAGGTGTTCAGGATCCTCGGAGAGAAAGATCCCGCGCGCCCTGGCAACCTGATAAACCCAGagAGTCCAGCGAGGAGTGCAATGGGATCAGCGGTGCTCTGTCAGTGGAGTCTGTGCCGGGGCCAAGACTGAACTGGTGTCCTGCCAACACCACTACCCCTGCCCCTGCAGCTCCAGCTCCTGCTCCGGGGCCCGAGCCTGCGCCCAACCCTGTTAGAATGGGGGACGGCCTGGATGCAGCGCAGATGtcgggcagcagcagcagccaggggCAGGCCCAGCAAATgggcaaccccccacccccagagTACATCAATCCCAACAGGCCAAAGCGCCAGACCAATCAGCTGCAGTACCTGCTTAAGGTGGTGGTGAAGGCCC
>TU210769
GGAGTCCGCTCTCGCCTTCCCCTCTCTCGCCTTCCCCTCTACTTCTTGGTTTCGGCTTGTGTCCATTTAAGTTGGGGAGGCCCTGGAGAGGACACACAATGGAGCGAAGAGCCTGTGGCAACTGGGCCGTTGTACTACTGAGAGGGGGATGGGGTAGAGAGAGGACCGGTTCACACAGCTAACACAGCCTGCCGGCTGTAGGCTTCAACAGCCTTTCCTCCCCGCCTGGACCCACTGTTTCCAGGCTGGGGCCTTTTTTGTGGATCTGCCACCCTCAAACAACGCTTGGACTACATTAAGGATTAATTACCGCGTTTTGTGGGATTTTAGGATACATACTGGAGCCTGAAGAATAATACCTCCCTGTGTTTTGGATAAGAGAAACGAAAAAACAAACTTCGGTGTAGTTCTTCTTGCCTGTTTTTGGTTTCTGTTTCAGTTTAGTGGAGTTCGTAAATGGATTACAAGATGCATGCCAAGTCAAACGATTTGCTGGATTTTCAAAAACTGGATGCCCTCCTGGAAAAAATTGCACATTCAGTCTCTGTGAAAAGagAGTCCAGCGAGGAGTGCAATGGGATCAGCGGTGCTCTGTCAGTGGAGTCTGTGCCGGGGCCAAGACTGAACTGGTGTCCTGCCAACACCACTACCCCTGCCCCTGCAGCTCCAGCTCCTGCTCCGGGGCCCGAGCCTGCGCCCAACCCTGTTAGAATGGGGGACGGCCTGGATGCAGCGCAGATGtcgggcagcagcagcagccaggggCAGGCCCAGCAAATgggcaaccccccacccccagagTACATCAATCCCAACAGGCCAAAGCGCCAGACCAATCAGCTGCAGTACCTGCTTAAGGTGGTGGTGAAGGCCC
>XM_039824691.1
TTTTTACTGTTGAGTAACTGCATGCTGGTCTGCGTGTgctggagagagtgagagagcgaGCTAGAGGAATAAAGTGCTCCACCTGGATCTTATCGGAGTCCGCTCTCGCCTTCCCCTCTCTCGCCTTCCCCTCTACTTCTTGGTTTCGGCTTGTGTCCATTTAAGTTGGGGAGGCCCTGGAGAGGACACACAATGGAGCGAAGAGCCTGTGGCAACTGGGCCGTTGTACTACTGAGAGGGGGATGGGGTAGAGAGAGGACCGGTTCACACAGCTAACACAGCCTGCCGGCTGTAGGCTTCAACAGCCTTTCCTCCCCGCCTGGACCCACTGTTTCCAGGCTGGGGCCTTTTTTGTGGATCTGCCACCCTCAAACAACGCTTGGACTACATTAAGGATTAATTACCGCGTTTTGTGGGATTTTAGGATACATACTGGAGCCTGAAGAATAATACCTCCCTGTGTTTTGGATAAGAGAAACGAAAAAACAAACTTCGGTGTAGTTCTTCTTGCCTGTTTTTGGTTTCTGTTTCAGTTTAGTGGAGTTCGTAAATGGATTACAAGATGCATGCCAAGTCAAACGATTTGCTGGATTTTCAAAAACTGGATGCCCTCCTGGAAAAAATTGCACATTCAGTCTCTGTGAAAAGagAGTCCAGCGAGGAGTGCAATGGGATCAGCGGTGCTCTGTCAGTGGAGTCTGTGCCGGGGCCAAGACTGAACTGGTGTCCTGCCAACACCACTACCCCTGCCCCTGCAGCTCCAGCTCCTGCTCCGGGGCCCGAGCCTGCGCCCAACCCTGTTAGAATGGGGGACGGCCTGGATGCAGCGCAGATGtcgggcagcagcagcagccaggggCAGGCCCAGCAAATgggcaaccccccacccccagagTACATCAATCCCAACAGGCCAAAGCGCCAGACCAATCAGCTGCAGTACCTGCTTAAGGTGGTGGTGAAGGCCCCGGGAACATTGTTTTAG

Function

NR:

description
PREDICTED: bromodomain-containing protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU210768 False 389 TUCP 0.63 2 16230784 16259025
TU210769 False 874 TUCP 0.54 2 16230784 16245331
XM_039824691.1 True 985 mRNA 0.53 3 16230459 16245425

Neighbor

gene id symbol gene type direction distance location
brd4 LOC104952514,LOC103370560 coding downstream 602 16221359 ~ 16229857 (-)
lpar2a lpar2,LOC104918571,LOC103392869 coding downstream 15066 16208250 ~ 16215393 (-)
LOC120574526 LOC103364137,LOC104952516,LOC108256828 coding downstream 122563 16106007 ~ 16107896 (-)
LOC120574529 NA coding downstream 125851 16101744 ~ 16104608 (-)
vac14 vac14 coding downstream 131470 16095711 ~ 16098989 (-)
LOC120574499 LOC101164155,LOC101071797 coding upstream 23855 16282880 ~ 16296424 (-)
nr5a5 LOC104952484,LOC103370553 coding upstream 82069 16341094 ~ 16344963 (-)
soul5 NA coding upstream 87353 16346378 ~ 16348909 (-)
notch3 LOC103358203,LOC104952487 coding upstream 109581 16368606 ~ 16397486 (-)
rdh8a rdh8,LOC103358204,LOC102201298 coding upstream 174598 16433623 ~ 16439841 (-)
G155493 NA non-coding downstream 7209 16204528 ~ 16223250 (-)
G155481 NA non-coding downstream 58154 16170923 ~ 16172305 (-)
G155462 colgalt1 non-coding downstream 111967 16117119 ~ 16118492 (-)
G155461 NA non-coding downstream 114937 16115108 ~ 16115522 (-)
G155460 NA non-coding downstream 118396 16110699 ~ 16112063 (-)
G155500 pet100 non-coding upstream 794 16259819 ~ 16262030 (-)
G155507 NA non-coding upstream 20466 16279491 ~ 16280224 (-)
G155508 NA non-coding upstream 21358 16280383 ~ 16281568 (-)
G155512 NA non-coding upstream 41522 16300547 ~ 16300761 (-)
G155532 LOC103358202,LOC104952486,LOC100696339 non-coding upstream 106977 16366002 ~ 16366852 (-)
LOC120574545 chchd5 other downstream 74392 16153787 ~ 16156067 (-)
G155323 LOC108415010,LOC101162128,LOC104945817 other downstream 415090 15813058 ~ 15815369 (-)
LOC120574502 LOC103367168,LOC100699371,LOC108241234,LOC101473146,LOC106529605 other downstream 441944 15746791 ~ 15788515 (-)
LOC120574537 NA other downstream 484887 15741763 ~ 15745572 (-)
tecra LOC103367165,LOC101076261,LOC106932487,LOC104960308,LOC108241336,LOC106529633,LOC103151989 other downstream 506037 15717847 ~ 15724422 (-)
G155583 eif3g other upstream 310421 16569446 ~ 16642131 (-)
angptl6 angptl6 other upstream 362801 16621826 ~ 16626733 (-)
mgrn1b mgrn1 other upstream 753386 17012411 ~ 17023208 (-)
polr3k polr3k other upstream 773960 17032985 ~ 17035040 (-)
unkl unkl,LOC102789129 other upstream 887083 17146108 ~ 17162165 (-)

Expression


Co-expression Network