psmg3 (psmg3)


Basic Information

Item Value
gene id psmg3
gene name psmg3
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 18019945 ~ 18022986 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU211468
GCTCAACCAAGCGATGCACGTTTGTTTTTGGCGAATGAGAGTCCTACTGAAGTTGCTGAAAGTCTAGTGTCTCCGTGCAGAAGCTTTTACTCTGTGcacaaacaaagaaacaggGATTACCAAAATGTCTTCTACTGAGCCCGTCATCAGatcgagacagacagagaaagaagtcAATGGAATTTCAACACAGGTTGTCTGTACAGAGTTCAGCAATTACATATTCATAGTTCTCACTCAGTATGGCAAAATGGGGACATTGATATCTGTCACACCTGACTCCAGATCTAATGATATCAGCACCCCAACATTCTCCACCAAAGTACTGCTGGGCAAAGATGAGCCACTGACGCACGTTTGTGCCAAAAACCTGGCAACTTTTGTGTCGAAAGAAGCCGGCAACAGGCCTGTCTTACTGGGACTGGCGCTCAAGGATTCCTCCATAGattcaataaaacaaatgaaagagaTCATAAAAAGTTGTCAAGTCTGGTAGAGGGTCAACATAATGCACATGAAGCTTAAAGGCTTGAGAAAATACAGGCCTAAAGATGCTCCCAATGTCACATTTTTCTCCTGTGTATTTTTAAACTGAAATATTTTGAGTATTTTCTAAATGCCAatctgtgatttaaaaaaacaacaacctgagGCTTGTGCTGCGAgacaaatgtttaaataaaatttgcATTCACTCagtaaataaaagaaacagTAAATAATTTCTTCTGAAAAACAATTTAGATTGTATCTGGTGCTTTCTGCAAGCCACTGTGCTCTCAAAAACTGAAGACTGTGCAATAGCTTCAGTTTAATGTATTAACCTTACCTTTTTTGTTTGGTTGAATttgtttgaatttatttttgtatgaagataattaagaaATAAAACCGCTCACTTCTTAAACAAATGTAACTCCTGTCATCTCGGCTCCTATGCTTTTTCTAATCTGCTCTGTCAATTACAGCAGTGTTACTTTGGTGAAAATGCAGTTAAAGAGTAATTTAAAGTAACTTTTTAACACATTTCAAAGCAAAGCATTCTGTGCTAGCAGTGTTTTACTGCAGATCATGACAAAAAACGCTAAGCAGTGAGTTGCACTATTATTTCAGATCC
>XM_039826218.1
TCATCACGCAGTGACAGCGTACGCTCAACCAAGCGATGCACGTTTGTTTTTGGCGAATGAGAGTCCTACTGAAGTTGCTGAAAGTCTAGTGTCTCCGTGCAGAAGCTTTTACTCTGTGcacaaacaaagaaacaggGATTACCAAAATGTCTTCTACTGAGCCCGTCATCAGatcgagacagacagagaaagaagtcAATGGAATTTCAACACAGGTTGTCTGTACAGAGTTCAGCAATTACATATTCATAGTTCTCACTCAGTATGGCAAAATGGGGACATTGATATCTGTCACACCTGACTCCAGATCTAATGATATCAGCACCCCAACATTCTCCACCAAAGTACTGCTGGGCAAAGATGAGCCACTGACGCACGTTTGTGCCAAAAACCTGGCAACTTTTGTGTCGAAAGAAGCCGGCAACAGGCCTGTCTTACTGGGACTGGCGCTCAAGGATTCCTCCATAGattcaataaaacaaatgaaagagaTCATAAAAAGTTGTCAAGTCTGGTAGAGGGTCAACATAATGCACATGAAGCTTAAAGGCTTGAGAAAATACAGGCCTAAAGATGCTCCCAATGTCACATTTTTCTCCTGTGTATTTTTAAACTGAAATATTTTGAGTATTTTCTAAATGCCAatctgtgatttaaaaaaacaacaacctgagGCTTGTGCTGCGAgacaaatgtttaaataaaatttgcATTCACTCagtaaataaaagaaacagTAAATAATTTCTTCTGAAAAACAATTTAGATTGTATCTGGTGCTTTCTGCAAGCCACTGTGCTCTCAAAAACTGAAGACTGTGCAATAGCTTCAGTTTAATGTATTAACCTTACCTTTTTTGTTTGGTTGAATttgtttgaatttatttttgtatgaagataattaagaaATAAAACCGCTCACTTCTTAAACAAATGTAACTCCTGTCATCTCGGCTCCTATGCTTTTTCTAATCTGCTCTGTCAATTACAGCAGTGTTACTTTGGTGAAAATGCAGTTAAAGAGTAATTTAAAGTAACTTTTTAACACATTTCAAAGCAAAGCATTCTGTGCTAGCAGTGTTTTACTGCAGATCATGACAAAAAACGCTAAGCAGTGAGTTGCACTATTATTTCAGATCCATTGGCTGTGATGAATATTGCTTTAATTGTGTAAAGTGTAATAAATGGATTTATAATATGTGGTCA

Function

symbol description
psmg3 Predicted to be part of proteasome complex. Orthologous to human PSMG3 (proteasome assembly chaperone 3).

NR:

description
proteasome assembly chaperone 3

GO:

id name namespace
GO:0000502 proteasome complex cellular_component

KEGG:

id description
K11877 PSMG3, PAC3; proteasome assembly chaperone 3

RNA

RNA id representative length rna type GC content exon number start site end site
TU211468 False 1117 TUCP 0.38 3 18020011 18022964
XM_039826218.1 True 1205 mRNA 0.38 3 18019945 18022986

Neighbor

gene id symbol gene type direction distance location
tmem184a tmem184a,LOC104945382 coding downstream 687 17998143 ~ 18019258 (-)
ints1 ints1 coding downstream 38963 17961593 ~ 17980982 (-)
si:dkey-43p13.5 LOC104944070,LOC103356273 coding downstream 67470 17948757 ~ 17952475 (-)
zfand2a zfand2a coding downstream 178985 17836474 ~ 17840960 (-)
galr2b LOC104918738,LOC103356301 coding downstream 208523 17796329 ~ 17811422 (-)
snx8a snx8 coding upstream 245429 18268415 ~ 18280376 (-)
lfng lfng,LOC106925146 coding upstream 289583 18312569 ~ 18319994 (-)
rps11 rps11 coding upstream 329474 18352460 ~ 18354987 (-)
LOC120575519 NA coding upstream 329775 18352761 ~ 18352844 (-)
LOC120575518 NA coding upstream 330377 18353363 ~ 18353446 (-)
LOC120574111 NA non-coding downstream 27918 17987780 ~ 17992027 (-)
G156026 NA non-coding downstream 36252 17983482 ~ 17983693 (-)
G155941 NA non-coding downstream 251461 17696325 ~ 17768484 (-)
G155942 ubfd1 non-coding downstream 304244 17712807 ~ 17715701 (-)
G155907 NA non-coding downstream 407913 17611768 ~ 17612032 (-)
LOC120574888 NA non-coding upstream 113104 18136090 ~ 18139609 (-)
G156068 NA non-coding upstream 156853 18179839 ~ 18180108 (-)
G156070 NA non-coding upstream 185911 18208897 ~ 18209177 (-)
LOC120574766 NA non-coding upstream 848868 18871854 ~ 18900161 (-)
LOC120574767 NA non-coding upstream 864519 18887505 ~ 18890913 (-)
micall2a micall2,LOC102794725 other downstream 74410 17933568 ~ 17945535 (-)
trnat-cgu NA other downstream 273288 17746586 ~ 17746657 (-)
G155888 hs3st4,LOC104958756,LOC100711185 other downstream 604104 17415525 ~ 17415841 (-)
baiap3 baiap3 other downstream 754640 17227133 ~ 17265305 (-)
gper1 gper1,LOC104918709,LOC100699814,LOC101483480 other downstream 846661 17165482 ~ 17173284 (-)
mrm2 mrm2,LOC102797561 other upstream 236415 18259401 ~ 18263674 (-)
G156321 NA other upstream 1085913 19108899 ~ 19120932 (-)
G156396 NA other upstream 1226740 19249726 ~ 19251256 (-)
si:busm1-163l24.3 NA other upstream 1918981 19941967 ~ 19947921 (-)
hexim1 LOC104946860 other upstream 2276038 20299024 ~ 20300946 (-)

Expression


Co-expression Network