hexim1 (LOC104946860)


Basic Information

Item Value
gene id hexim1
gene name LOC104946860
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 20299024 ~ 20300946 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU212359
GTTGTTACGGTGAAACGTCGTCTCCGGTTCAACGTTAGCTGTTACAGCATCGAAACAGTTAATGGTAGATAGCGACAGTTGCTCTGACAAACCCTTGGAGGAGTAACAAGTGTTTATGGTTCAgaagtttacttttaatttgCGAGAGTTTGTTTTAAGACGTAAAAACTTAAACTTTCTTTAGTGATTTCGGCTCAATCTGGAATACgaatatttttttttttttttttttttaaacaaattgtttAGTGTAATCAGTTTGTCATTTGGACAATGAGTCCTTGCATTGCAATGCAATACGTTTCTTTTCTATTTGGACTGTAAGGGTGTCctgttcaattttattttcaagaaatgtaaatatttcAATAGATTCTTTTTATAAAGAGAATGTATTTGACAACACGAGAAATTGGTGTTTCCGGGGTCAACTCTAAGGTATCCATTGACATATAATGTTCCGTTTttctaatttaaaaacaaacgtttgttgcatttccccccaaaaaaatgaataattacAGCTAATTGGATCAGCTTGTTAAAACTGTTTTTTGCATAAGTAAATGCCAGAGTGAATATTTTAACAGTTGT
>XM_039824001.1
ACACTGGACACTGTTGTTACGGTGAAACGTCGTCTCCGGTTCAACGTTAGCTGTTACAGCATCGAAACAGTTAATGGTAGATAGCGACAGTTGCTCTGACAAACCCTTGGAGGAGTAACAAGTGTTTATGGTTCAgaagtttacttttaatttgCGAGAGTTTGTTTTAAGACGTAAAAACTTAAACTTTCTTTAGTGATTTCGGCTCAATCTGGAATACgaatattttttgtttaaattgagTTTAGCGAACTTTGAAGATAAGTTTTGAGAGCATGAACATGATCTAAAATCCGCTAAAGCGGAGCCATCAGAGCGGAACATCATGATGACAGAGCCAATGGAGCAGACCCATCACCTGAAAACTTCAGGCAGCCCATCAGGTGGGAGCAGTGGGGACGCGTTGGAGCATCTCCCAGCCAGAAACCGTGGTGGACCAGAGAACGGCAACAGGGGGCGACAGAGAGACCAAAAGCGACAGCAGCGGGCGGAGAACTGTGAGGGTATCAACACAGACAAGTTATGGCAAATGAAAGGCGAACAGAGGGAGGTGTGCCCTGCCTTCGCAGCCGGAAACGAGCTCATAAAGTGCCCGATTGCAAATCAGCCTCACCAGAAAGCCGATCATTCAGCGGGTGACGGTAATCCTATTGCACAGGGGAAAAACTGCGAAGGCAGACCACTGGAGGAAACTTTAAACCAGGTGCAAGAGGATAGTCACATCGACTCTGACACTGGTTTTGATGCGCGTCTGGGCAAGAAGAGACACAGGCGCAGGACATCCAGGAAGAAGCGCAACTGGAAGCCTTATTGCCAACTTTCTTGGGATGAAAGGAAAGCCTTGGAAGAGAAAGAGACGGCCAGGGCTTCACGGGTGAGGGAGGAGATGTTCGCCAAAGGGCTCCCAGTGGCCCCCTATAACACCACCCAGTTCCTGATGGACGAGCACGACCGAGAGGAGCCCGACCTCAACACCGAGACCGGGGTCAGGCGGCCCTCAGGGGTCGGTAGCCGCATGGAGGACACGGGCAGCGAGGAGGACCTCTGCGACaacaacaacgaggaggaggacgatGATGAAGGCAGCGGGGGAGGCAGCGACGGCATCGGGAGACCTGGGAACGCAGGTGGTGAGTTTCTCCAGAGAGACTTTTCCGAGACCTACGAGATGTACCATGTCGAGAGCCTGCAGAATATGACCAAGCAGGAGCTGGTCCAGGAGTACCTGGAGCTGGAGAAGTGCATGTCCCGCCTGGAGGAGGAGAACAACCGGCTGAGGCGCGCCGTGGAGCCCGGGGGTCTGACCGCGGAGAGCTCCCTGGTCCGACTCAGAGAGCTGGAGAGGGAACTGGAGAGACTGAGGGCCCAAAACACTGAGCTCCTTCTGCAGAACCAGCCGAGCAATGACAGGGGCCAAGTCGCTACCAATTAAAGGACACAATTCAAGTGGGGGAAAGccccctttaaaaaaaggtaaacaTGGGACTGctacactttttcttttttttttttttttttttttttttaaacaaattgtttAGTGTAATCAGTTTGTCATTTGGACAATGAGTCCTTGCATTGCAATGCAATACGTTTCTTTTCTATTTGGACTGTAAGGGTGTCctgttcaattttattttcaagaaatgtaaatatttcAATAGATTCTTTTTATAAAGAGAATGTATTTGACAACACGAGAAATTGGTGTTTCCGGGGTCAACTCTAAGGTATCCATTGACATATAATGTTCCGTTTttctaatttaaaaacaaacgtttgttgcatttccccccaaaaaaatgaataattacAGCTAATTGGATCAGCTTGTTAAAACTGTTTTTTGCATAAGTAAATGCCAGAGTGAATATTTTAACAGTTGTGTGTAAGTTCAAATAAAATTTTGAAATTCTGCTGTCA

Function

NR:

description
PREDICTED: protein HEXIM-like

GO:

id name namespace
GO:0071901 negative regulation of protein serine/threonine kinase activity biological_process
GO:0000122 negative regulation of transcription by RNA polymerase II biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0017069 snRNA binding molecular_function
GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity molecular_function

KEGG:

id description
K15189 HEXIM1_2; protein HEXIM1/2

RNA

RNA id representative length rna type GC content exon number start site end site
TU212359 False 594 lncRNA 0.32 2 20299061 20300934
XM_039824001.1 True 1923 mRNA 0.48 1 20299024 20300946

Neighbor

gene id symbol gene type direction distance location
trnac-gca_27 NA coding downstream 127666 20171287 ~ 20171358 (-)
rpl19 rpl19,LOC107084780,LOC103371192 coding downstream 173055 20122436 ~ 20125969 (-)
st8sia6 LOC103373795 coding downstream 185579 20102040 ~ 20113445 (-)
LOC120575253 LOC103373795,LOC104965482 coding downstream 220007 20047157 ~ 20079017 (-)
trnac-gca_26 NA coding downstream 278736 20020217 ~ 20020288 (-)
tmem98 tmem98 coding upstream 77155 20378101 ~ 20384616 (-)
kcnj19a LOC106527510,LOC107084768,LOC101480582,LOC102209712,LOC104946854,LOC100707605,LOC103469386 coding upstream 180553 20481499 ~ 20496994 (-)
asic2 asic2,LOC102794937 coding upstream 316517 20617463 ~ 21031879 (-)
hrob NA coding upstream 737159 21038105 ~ 21050607 (-)
ubtf ubtf coding upstream 773637 21074583 ~ 21085215 (-)
G156658 NA non-coding downstream 56438 20242255 ~ 20242586 (-)
G156645 lasp1,LOC102776212 non-coding downstream 84097 20203511 ~ 20214927 (-)
G156635 LOC104959536,LOC101077170 non-coding downstream 111330 20187136 ~ 20187694 (-)
G156631 NA non-coding downstream 124561 20173498 ~ 20174463 (-)
G156595 znf652 non-coding downstream 326521 19968932 ~ 19972503 (-)
G156684 plcd3 non-coding upstream 22963 20323909 ~ 20324231 (-)
G156693 NA non-coding upstream 33866 20334812 ~ 20338081 (-)
G156695 retsat non-coding upstream 38104 20339050 ~ 20340458 (-)
G156698 retsat,LOC100196171 non-coding upstream 40917 20341863 ~ 20344917 (-)
G156834 NA non-coding upstream 754743 21055689 ~ 21055902 (-)
si:busm1-163l24.3 NA other downstream 351103 19941967 ~ 19947921 (-)
G156396 NA other downstream 1047768 19249726 ~ 19251256 (-)
G156321 NA other downstream 1178092 19108899 ~ 19120932 (-)
mrm2 mrm2,LOC102797561 other downstream 2035350 18259401 ~ 18263674 (-)
psmg3 psmg3 other downstream 2276038 18019945 ~ 18022986 (-)
atxn7l3a atxn7l3 other upstream 763814 21064760 ~ 21071507 (-)
selenow2a LOC102798572 other upstream 804914 21105860 ~ 21108793 (-)
LOC120575154 spop,LOC102792310 other upstream 1032463 21333409 ~ 21392747 (-)
ndufa4a LOC101066870,LOC103357383,LOC101155111,LOC107378524 other upstream 1162261 21463207 ~ 21465077 (-)
G157034 NA other upstream 1320084 21621030 ~ 21622961 (-)

Expression


Co-expression Network