G157081 (cd2bp2)


Basic Information

Item Value
gene id G157081
gene name cd2bp2
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 21694931 ~ 21698789 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU212871
GCATAACAAACCTGAACTGTGTCCCAATTCTATACTTGAAAACATCACAATTAAACAAGTGTTTTTTAAGAATGTACACCTTTCTATATTTTAGTTCTAAGCCCTTGTTAAAATTATAACCTACaattttctattattattttttactattacaattttctctttcttcctcattAATGTGTGATTGAGAGAATAAGCAGGGTGCCAATTCCATACTACATATTGTTTACAATAAACATTCTGTTGAGCAACACGTTTGACAACACATTTGAAAATTGCCACAATCAATTATACACAAGGATATCAATACACATACTAAATTTGCTTAGTTTTTGATTGTGCTGTTGTTTGACAATATTGTCACACAAGCAAATTCTCGGTTTGGTACGTTTGTGGATGTCATAATCAGTCATCATAGTATTCAGGTATGGACCAAATTAACTGCACTGAAACCAGCATAAAGTGGTGTTGGAAATTTAAACACATACTTGATTCATCACGTCAACTTATACTAGCTTTGTCACCCATCATCACCCTGACTGCTACCACCAAGTTTGATCGGATAAGTTTTAACATGTGCTTACAAAACCAGAAtgtcaaaacaaaagcaaagacTTGGATCTGATGTCATAGCCTAATCTGTTCCATATAGATCCATTATATCAAAAGAAAACCATACAATACCAGTTGTATACTGTATCACAAACTCAAGAACTGCTTTTGTTGAAGAACCTTTGATTTTAAGTTGATAGAAGAGAATACCTGCATCTGCTGACTGGTGAAAGGGCCGAAAACCTCTGAATCATCCTTATTTTCCCATTTGTACTCCCACATGACTTCATCACTCACTTTTTCGTCTTCTTCCCTCTCTGATCTGCCTGTATGAGTCTCGTCAAATTTATCTGCGAACATGTCAAGTTCATCTTCTTCATCACTATCACCAACGGGTTTCTTCCCCACAGCTGGTCGCTTGCTCTTCATGCTCTTCATCATATAGGCCAATTTTTCATATGTTTGCTGATATATCTCAAACATCCCAGATCCAACCAATCTGTCAGCTAGTGCTGTGAGCCTGTCGAGCTTTTCTGTATCCCTTTTGGTCTCCTCCGTGGGTTCACTCTGTTCCCTCAGCTTCCCCTTCTTCCTTCCTCCAAGGCCTCCTAGCCGACGGAGTGCTTTGGCAACTGTCTCCCCAGGTAGCAACAGTTCGACCACAGCTTCAGTGAGCTGGTGCTGCGTGTAGGATGCCAGCGGGTCCTCTGCAggctccatctcctcctcttcttcttcttcttcattgtTTTCTCCACCTGCCtgcttctcttctctctgtttctcttcctCAGCCTCATCCTCATCCCCAGCTCTGCGTTTCCGTTTGGCTCCGAGacctttcttcttttgtttgtaaGGTTGTTCTTTTATTCTCACcCAGTCAATGTTGTCGAGCCAATTGTCTCTAATCTGTTCTTCCTTTTTGATGAAATAGTTTCCCTCGGAGTCAAAGTATCCTTCCTGCATCTCCTCATCCAGGTTGAAAGGTGTAATAGAAACTCCCTCGTCATAGTCAATTGTGGCTCCCTCTTGGCCTTCCACGTCATCATTGGCAAGAATATCATATTtgttgctgctttttgtttcttCCCCTTCATCCTCTTCATCACTGTCAAGGGAATGTTTGCCCTTAAACCTGGAGCCTGGTCCACTCACAACCTCACAAATCTTTTTGTTTGGTAGGTCTTCATCCAGCTCTAACACCCCGTCCCCGTCCTCAAATGTTACTTTCCTCTTCGGCATGGTGCTTGGTGTGAAATTATACAAACAAGGCGAAAAAACTGATATTTAGCTGGGAAATGTGCCAAAacttgataaaaaaataattcaagcGACGTTCGTTTTCGTTTCTTCTTCgcttgttttcttcttctcctctctttttaGGTCTGTGCTGGCTGGCAAACAGTAATACCGTATTACTAATACGGCGCATTACCGCCGCCACCTGGTGAGGAGTGTAGAGAGGATTATAGACGATATGTTCGAATCACATTGAACTGCAGTGTTCTCC

Function

symbol description
cd2bp2 Predicted to be part of U5 snRNP. Orthologous to human CD2BP2 (CD2 cytoplasmic tail binding protein 2).

NR:

description
PREDICTED: CD2 antigen cytoplasmic tail-binding protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212871 True 2068 lncRNA 0.41 6 21694931 21698789

Neighbor

gene id symbol gene type direction distance location
pheta2 LOC103367340,LOC104943744,LOC104930231,LOC103392672 coding downstream 129 21690695 ~ 21694802 (-)
mylpfa mylpf,LOC107378514 coding downstream 9243 21680872 ~ 21685688 (-)
dcaf7 dcaf7,LOC100702343,LOC105030232,LOC105898766 coding downstream 79828 21610676 ~ 21615103 (-)
trnac-gca_31 NA coding downstream 90495 21604365 ~ 21604436 (-)
strada strada coding downstream 181530 21501199 ~ 21513401 (-)
si:dkey-66i24.7 LOC102077857,LOC102782865,LOC102307613,LOC101474966,LOC103367331,LOC104934487 coding upstream 45297 21744086 ~ 21746426 (-)
LOC120575109 NA coding upstream 79858 21778647 ~ 21785262 (-)
LOC120575110 NA coding upstream 87417 21786206 ~ 21789638 (-)
cldni cldn32a,LOC103367325,LOC104930709,LOC103392689 coding upstream 117221 21816010 ~ 21819485 (-)
mybpc2a NA coding upstream 424654 22123443 ~ 22180634 (-)
G157075 hsd3b7 non-coding downstream 27533 21665450 ~ 21667398 (-)
G157065 NA non-coding downstream 59338 21634789 ~ 21635593 (-)
G156989 NA non-coding downstream 199816 21467195 ~ 21495115 (-)
G156985 NA non-coding downstream 232251 21461520 ~ 21462680 (-)
G156934 NA non-coding downstream 368530 21326114 ~ 21326401 (-)
G157092 NA non-coding upstream 28406 21727195 ~ 21729411 (-)
G157135 NA non-coding upstream 122833 21821622 ~ 21831111 (-)
G157144 NA non-coding upstream 140801 21839590 ~ 21840057 (-)
G157145 NA non-coding upstream 143317 21842106 ~ 21842378 (-)
G157146 NA non-coding upstream 147567 21846356 ~ 21846723 (-)
G157034 NA other downstream 71970 21621030 ~ 21622961 (-)
ndufa4a LOC101066870,LOC103357383,LOC101155111,LOC107378524 other downstream 229854 21463207 ~ 21465077 (-)
LOC120575154 spop,LOC102792310 other downstream 302184 21333409 ~ 21392747 (-)
selenow2a LOC102798572 other downstream 586138 21105860 ~ 21108793 (-)
atxn7l3a atxn7l3 other downstream 623424 21064760 ~ 21071507 (-)
LOC120574354 NA other upstream 16225 21715014 ~ 21718729 (-)
G157096 LOC102782282,LOC100692966,LOC103367351,LOC107084765,LOC104927186,LOC102201015 other upstream 35593 21734382 ~ 21740703 (-)
LOC120575106 LOC103367329,LOC107658449,LOC107564019,LOC107674165,LOC104934486 other upstream 55952 21754741 ~ 21756191 (-)
G157147 cdhr2 other upstream 150306 21849095 ~ 21856016 (-)
G157384 LOC102296880,LOC102202593,LOC101475579 other upstream 926997 22625786 ~ 22639389 (-)

Expression


Co-expression Network