LOC120575106 (LOC103367329,LOC107658449,LOC107564019,LOC107674165,LOC104934486)


Basic Information

Item Value
gene id LOC120575106
gene name LOC103367329,LOC107658449,LOC107564019,LOC107674165,LOC104934486
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 21754741 ~ 21756191 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU212895
ATTGAAATAGGGAGGAGTCTGACACACAGAGTTTAACCCAGGACAGACTGAAGGACAAACAAGCAGGAaggagaagaaaataaaacaaacaacggCTTCACCAGAAAAATAAAGAGGATAATAAAGCCTATTGGATATTGTCTGCCTGAAGAACAATGTCTGTGTCTCCAGCTGCCTTGGTCGCTCGACGGGTGCTTGCTGCTGCGTCACATTCAAGCCATGAGGGAGGAGCGAGGACCTGGAAGATACTGACCTTTGTGTTGGCCCTTCCTGGTGTTGGTGTCTGCATAGCCAATGCCTACATGAAGATGCAGGCGCACTCGCATGAGCAGCCTGAATTTGTGCCATTTCCTCACTTGCGCATCCGCACCAAGAAATTCCCGTGGGGCGATGGAAACCACTCTCTGTTCCACAACTCTCACACCAACCCTCTGCCTGATGGCTTTGAGGGCTCCCATCACTGAGAAGATCGGTCACATTTCTCAGCTGTGTTATGCTGCTTATTTAAAACTTCAGTCTGCAGTGTACTTGGCTTAATTATACTGACCGAGGGGCCAAGCAGCACCGCCATCAAGCGGTGCACCCAGACAAGAAT
>XM_039825726.1
CAGATTGAAATAGGGAGGAGTCTGACACACAGAGTTTAACCCAGGACAGACTGAAGGACAAACAAGCAGGAaggagaagaaaataaaacaaacaacggCTTCACCAGAAAAATAAAGAGGATAATAAAGCCTATTGGATATTGTCTGCCTGAAGAACAATGTCTGTGTCTCCAGCTGCCTTGGTCGCTCGACGGGTGCTTGCTGCTGCGTCACATTCAAGCCATGAGGGAGGAGCGAGGACCTGGAAGATACTGACCTTTGTGTTGGCCCTTCCTGGTGTTGGTGTCTGCATAGCCAATGCCTACATGAAGATGCAGGCGCACTCGCATGAGCAGCCTGAATTTGTGCCATTTCCTCACTTGCGCATCCGCACCAAGAAATTCCCGTGGGGCGATGGAAACCACTCTCTGTTCCACAACTCTCACACCAACCCTCTGCCTGATGGCTTTGAGGGCTCCCATCACTGAGAAGATCGGTCACATTTCTCAGCTGTGTTATGCTGCTTATTTAAAACTTCAGTCTGCAGTGTACTTGGCTTAATTATACTGACCGAGGGGCCAAGCAGCACCGCCATCAAGCGGTGCACCCAGACAAGAATAAATCCACTTTGTGCTGTATTACAA

Function

NR:

description
PREDICTED: cytochrome c oxidase subunit 6A, mitochondrial

GO:

id name namespace
GO:1902600 proton transmembrane transport biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005751 mitochondrial respiratory chain complex IV cellular_component
GO:0004129 cytochrome-c oxidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU212895 False 595 TUCP 0.49 4 21754766 21756188
XM_039825726.1 True 623 mRNA 0.49 4 21754741 21756191

Neighbor

gene id symbol gene type direction distance location
si:dkey-66i24.7 LOC102077857,LOC102782865,LOC102307613,LOC101474966,LOC103367331,LOC104934487 coding downstream 8315 21744086 ~ 21746426 (-)
pheta2 LOC103367340,LOC104943744,LOC104930231,LOC103392672 coding downstream 59939 21690695 ~ 21694802 (-)
mylpfa mylpf,LOC107378514 coding downstream 69053 21680872 ~ 21685688 (-)
dcaf7 dcaf7,LOC100702343,LOC105030232,LOC105898766 coding downstream 139638 21610676 ~ 21615103 (-)
trnac-gca_31 NA coding downstream 150305 21604365 ~ 21604436 (-)
LOC120575109 NA coding upstream 22456 21778647 ~ 21785262 (-)
LOC120575110 NA coding upstream 30015 21786206 ~ 21789638 (-)
cldni cldn32a,LOC103367325,LOC104930709,LOC103392689 coding upstream 59819 21816010 ~ 21819485 (-)
mybpc2a NA coding upstream 367252 22123443 ~ 22180634 (-)
akt1s1 akt1s1,LOC102786700 coding upstream 465182 22221373 ~ 22226314 (-)
G157092 NA non-coding downstream 25330 21727195 ~ 21729411 (-)
G157081 cd2bp2 non-coding downstream 55952 21694931 ~ 21698789 (-)
G157075 hsd3b7 non-coding downstream 87343 21665450 ~ 21667398 (-)
G157065 NA non-coding downstream 119148 21634789 ~ 21635593 (-)
G156989 NA non-coding downstream 259626 21467195 ~ 21495115 (-)
G157135 NA non-coding upstream 65431 21821622 ~ 21831111 (-)
G157144 NA non-coding upstream 83399 21839590 ~ 21840057 (-)
G157145 NA non-coding upstream 85915 21842106 ~ 21842378 (-)
G157146 NA non-coding upstream 90165 21846356 ~ 21846723 (-)
G157161 shank1 non-coding upstream 171781 21927972 ~ 21932946 (-)
G157096 LOC102782282,LOC100692966,LOC103367351,LOC107084765,LOC104927186,LOC102201015 other downstream 14038 21734382 ~ 21740703 (-)
LOC120574354 NA other downstream 36012 21715014 ~ 21718729 (-)
G157034 NA other downstream 131780 21621030 ~ 21622961 (-)
ndufa4a LOC101066870,LOC103357383,LOC101155111,LOC107378524 other downstream 289664 21463207 ~ 21465077 (-)
LOC120575154 spop,LOC102792310 other downstream 361994 21333409 ~ 21392747 (-)
G157147 cdhr2 other upstream 92904 21849095 ~ 21856016 (-)
G157384 LOC102296880,LOC102202593,LOC101475579 other upstream 869595 22625786 ~ 22639389 (-)
LOC120575271 LOC104967158,LOC103366161 other upstream 1052345 22808536 ~ 22834656 (-)
tmem100a tmem100,LOC104954564,LOC101486137 other upstream 1689171 23445362 ~ 23448560 (-)
cbx2 cbx2,LOC104963701 other upstream 1771253 23527444 ~ 23534409 (-)

Expression


Co-expression Network