G157287 (LOC108237768,LOC103368180,LOC100690364,LOC107378484,LOC103144947)


Basic Information

Item Value
gene id G157287
gene name LOC108237768,LOC103368180,LOC100690364,LOC107378484,LOC103144947
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 22212170 ~ 22219414 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU213158
TGAGTGTTCATATCTCTCGGGCCTGTTGGGATATGGGCAGACAGCGTCTGATGTACGGGCCACTTTGGACCCACCTTCTGAAATCCACAACAGTTTCTGTGCAGTTTTATCATCCAGAGTGAGTGGGAGCCAATATTTCATGAAGTCTGCTCTGGTGGTGGGTTCAGGGATATTTGGCTCATATGGCGGTGGCTTCACTTCCCCAGCACTGCTGCTTTTTCttcCTGCTTTCTTGGGCACAGGCATGATTCCCTTGGCGCTCACGGGTGTGATTGGCATCAAACGGGGAGGTCTTGTGATAGTGTGCCTGTGCGTCTCTGGAGGCTCTCTCTTATGgactctctctctaactctatGGGGGGGGCGTTGCATATGTTTTGGTTGGATGCAACGGCCACGCAAAGGGATGGTCCTGTCACATAACACTCCAGTTCCTTTCTAGGGATCAGATAGTTGGAGACAAGCAAATACCCGGTATATCCCAAGTATACATGCTCATTTGCATACACATGGACTGAGCATGTGCCTGATGCACACACCCC

Function

NR:

description
PREDICTED: tripartite motif-containing protein 16-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU213158 True 542 lncRNA 0.51 4 22212170 22219414

Neighbor

gene id symbol gene type direction distance location
mybpc2a NA coding downstream 31536 22123443 ~ 22180634 (-)
cldni cldn32a,LOC103367325,LOC104930709,LOC103392689 coding downstream 392685 21816010 ~ 21819485 (-)
LOC120575110 NA coding downstream 422532 21786206 ~ 21789638 (-)
LOC120575109 NA coding downstream 426908 21778647 ~ 21785262 (-)
si:dkey-66i24.7 LOC102077857,LOC102782865,LOC102307613,LOC101474966,LOC103367331,LOC104934487 coding downstream 465744 21744086 ~ 21746426 (-)
akt1s1 akt1s1,LOC102786700 coding upstream 1959 22221373 ~ 22226314 (-)
LOC120574468 NA coding upstream 75776 22295190 ~ 22303508 (-)
LOC120574469 NA coding upstream 121221 22340635 ~ 22346505 (-)
ifi35 NA coding upstream 151125 22370539 ~ 22376877 (-)
rundc1 rundc1 coding upstream 163742 22383156 ~ 22389962 (-)
G157205 NA non-coding downstream 112638 22099308 ~ 22099532 (-)
G157203 lrrc4b,LOC102785919 non-coding downstream 123746 22087911 ~ 22088424 (-)
G157201 NA non-coding downstream 145055 22065008 ~ 22067115 (-)
LOC120575515 NA non-coding downstream 266799 21945280 ~ 21945371 (-)
LOC120575514 NA non-coding downstream 267471 21944608 ~ 21944699 (-)
G157300 LOC100690097,LOC101482526,LOC102787595,LOC104954386 non-coding upstream 33516 22252930 ~ 22254670 (-)
G157330 NA non-coding upstream 158530 22377944 ~ 22381452 (-)
G157312 LOC101166874,LOC107396272,LOC107097254,LOC104954376,LOC103392522,LOC106518874,LOC101065127 non-coding upstream 192478 22411892 ~ 22414160 (-)
G157337 NA non-coding upstream 215889 22435303 ~ 22435878 (-)
G157357 NA non-coding upstream 354423 22573837 ~ 22574108 (-)
G157147 cdhr2 other downstream 356154 21849095 ~ 21856016 (-)
LOC120575106 LOC103367329,LOC107658449,LOC107564019,LOC107674165,LOC104934486 other downstream 455979 21754741 ~ 21756191 (-)
G157096 LOC102782282,LOC100692966,LOC103367351,LOC107084765,LOC104927186,LOC102201015 other downstream 471467 21734382 ~ 21740703 (-)
LOC120574354 NA other downstream 493441 21715014 ~ 21718729 (-)
G157034 NA other downstream 589209 21621030 ~ 21622961 (-)
G157384 LOC102296880,LOC102202593,LOC101475579 other upstream 406372 22625786 ~ 22639389 (-)
LOC120575271 LOC104967158,LOC103366161 other upstream 589122 22808536 ~ 22834656 (-)
tmem100a tmem100,LOC104954564,LOC101486137 other upstream 1225948 23445362 ~ 23448560 (-)
cbx2 cbx2,LOC104963701 other upstream 1308030 23527444 ~ 23534409 (-)
G157645 LOC103366762 other upstream 1913634 24133048 ~ 24138023 (-)

Expression


Co-expression Network