G157300 (LOC100690097,LOC101482526,LOC102787595,LOC104954386)


Basic Information

Item Value
gene id G157300
gene name LOC100690097,LOC101482526,LOC102787595,LOC104954386
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 22252930 ~ 22254670 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU213172
TTTGGTTTAAATTAAGACTTTATTTGAAGAGGTTTATAATTTTACACTGAAGGCCATTTAAGGTCTTTAAATCTAATGTAGACCACAAAGATGAACACACAGTACGATATGTCATGGTTCACGAGCCAAGTCTTTCAGAATTTATACATACAGTTCATGTAATTTAGTCTGAGGAACCCATCTGGATATCTGTGTCAGTGCAAATCggagtatgtgtatgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgttttaaggCTGTCAGAGTGTGCTGCATTAAGTGTGTAAAGGCAGATTCTGTGGAGGTTCTGCAGGCAGATTATTCTGGGGCTCGGCTTGGTGCTCAGCTGGGACTTTTGCCTCTTTATTTTCCACTTGTATCTCTGGTTGGAACTGTAGTTCTCCATGAGGACCTGTAGGAGGCTGCCCGCCTGCTGCCTGCTGTTCCTTCTGTCTCTGGGACATCTCTAATACTGCCTGCTGGTACTCTCTCCTCTGGGCCTCCAGGGCTTTGCCTCTCTCCTTCAGCAGGTCCTGCTGCTGACGCAGATTCTCTGCCTTCctcttcagctcctcctcttTGTCCCGGAGTTCAACCTCAAATCGCTGCAGCTCTTCCTCGGTGTACACCGGTCTGGTTTCCAGAGTCTACAGAGACAGCAGTGGGAGTCGATGTAATGCAATGTATTCACACCACTACTGAAAGGTTATAGTTTAGTAAAGGCTTCACCATACTCATGCACATAAACTCATGAGTTGGTTCAGCTTCGGTCTAGATCTTTACTTTGCATGCAAAAGTAAATATTATACAAACATACTTTAGACTAAAAGGAAGGCATATAGTCCACTGTTGCAATGCTCTTTATGTCACATAATTATTACCCCT
>TU213175
TTTGGTTTAAATTAAGACTTTATTTGAAGAGGTTTATAATTTTACACTGAAGGCCATTTAAGGTCTTTAAATCTAATGTAGACCACAAAGATGAACACACAGTACGATATGTCATGGTTCACGAGCCAAGTCTTTCAGAATTTATACATACAGTTCATGTAATTTAGTCTGAGGAACCCATCTGGATATCTGTGTCAGTGCAAATCggagtatgtgtatgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgttttaaggCTGTCAGAGTGTGCTGCATTAAGTGTGTAAAGGCAGATTCTGTGGAGGTTCTGCAGGCAGATTATTCTGGGGCTCGGCTTGGTGCTCAGCTGGGACTTTTGCCTCTTTATTTTCCACTTGTATCTCTGGTTGGAACTGTAGTTCTCCATGAGGACCTGTAGGAGGCTGCCCGCCTGCTGCCTGCTGTTCCTTCTGTCTCTGGGACATCTCTAATACTGCCTGCTGGTACTCTCTCCTCTGGGCCTCCAGGGCTTTGCCTCTCTCCTTCAGCAGGTCCTGCTGCTGACGCAGATTCTCTGCCTTCctcttcagctcctcctcttTGTCCCGGAGTTCAACCTCAAATCGCTGCAGCTCTTCCTCGGTGTACACCGGTCTGGTTTCCAGGATTTCAGGAACTCCTCCAGGCTGACGAGACGATCTTTATTTGCGTCCACCTTTTAACACAGAAACGTACGCTGCATCAGTCGCAgcaaagcagagagagaagtgGAGAGTGACTCACGG

Function

NR:

description
PREDICTED: nucleobindin-2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU213172 True 896 lncRNA 0.44 4 22253450 22254670
TU213175 False 775 lncRNA 0.47 5 22252930 22254670

Neighbor

gene id symbol gene type direction distance location
akt1s1 akt1s1,LOC102786700 coding downstream 26616 22221373 ~ 22226314 (-)
mybpc2a NA coding downstream 72296 22123443 ~ 22180634 (-)
cldni cldn32a,LOC103367325,LOC104930709,LOC103392689 coding downstream 433445 21816010 ~ 21819485 (-)
LOC120575110 NA coding downstream 463292 21786206 ~ 21789638 (-)
LOC120575109 NA coding downstream 467668 21778647 ~ 21785262 (-)
LOC120574468 NA coding upstream 40520 22295190 ~ 22303508 (-)
LOC120574469 NA coding upstream 85965 22340635 ~ 22346505 (-)
ifi35 NA coding upstream 115869 22370539 ~ 22376877 (-)
rundc1 rundc1 coding upstream 128486 22383156 ~ 22389962 (-)
grna LOC104954377,LOC107096383 coding upstream 136353 22391023 ~ 22401598 (-)
G157287 LOC108237768,LOC103368180,LOC100690364,LOC107378484,LOC103144947 non-coding downstream 33516 22212170 ~ 22219414 (-)
G157205 NA non-coding downstream 153398 22099308 ~ 22099532 (-)
G157203 lrrc4b,LOC102785919 non-coding downstream 164506 22087911 ~ 22088424 (-)
G157201 NA non-coding downstream 185815 22065008 ~ 22067115 (-)
LOC120575515 NA non-coding downstream 307559 21945280 ~ 21945371 (-)
G157330 NA non-coding upstream 123274 22377944 ~ 22381452 (-)
G157312 LOC101166874,LOC107396272,LOC107097254,LOC104954376,LOC103392522,LOC106518874,LOC101065127 non-coding upstream 157222 22411892 ~ 22414160 (-)
G157337 NA non-coding upstream 180633 22435303 ~ 22435878 (-)
G157357 NA non-coding upstream 319167 22573837 ~ 22574108 (-)
G157358 NA non-coding upstream 319699 22574369 ~ 22574604 (-)
G157147 cdhr2 other downstream 396914 21849095 ~ 21856016 (-)
LOC120575106 LOC103367329,LOC107658449,LOC107564019,LOC107674165,LOC104934486 other downstream 496739 21754741 ~ 21756191 (-)
G157096 LOC102782282,LOC100692966,LOC103367351,LOC107084765,LOC104927186,LOC102201015 other downstream 512227 21734382 ~ 21740703 (-)
LOC120574354 NA other downstream 534201 21715014 ~ 21718729 (-)
G157034 NA other downstream 629969 21621030 ~ 21622961 (-)
G157384 LOC102296880,LOC102202593,LOC101475579 other upstream 371116 22625786 ~ 22639389 (-)
LOC120575271 LOC104967158,LOC103366161 other upstream 553866 22808536 ~ 22834656 (-)
tmem100a tmem100,LOC104954564,LOC101486137 other upstream 1190692 23445362 ~ 23448560 (-)
cbx2 cbx2,LOC104963701 other upstream 1272774 23527444 ~ 23534409 (-)
G157645 LOC103366762 other upstream 1878378 24133048 ~ 24138023 (-)

Expression


Co-expression Network