G157312 (LOC101166874,LOC107396272,LOC107097254,LOC104954376,LOC103392522,LOC106518874,LOC101065127)


Basic Information

Item Value
gene id G157312
gene name LOC101166874,LOC107396272,LOC107097254,LOC104954376,LOC103392522,LOC106518874,LOC101065127
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 22411892 ~ 22414160 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU213190
TGACCATAAGCCTACACATCTTAGTTTGTATAATATGCTTTTAAATTGACAAGACAAATtctttgagtttgtttttattaaataactGCACAACAGTAATGACAGTCAATGCAGCAGAGCCTTTTGTTGTAGACTTCAAGCAGTTTCTTCCTTGGTGATACGGTCCTTCTTGAGTGGTCCCATGAATGCCTTCTTTTCCTCCACAGTCTGGAAGCGTCCGTGACCGAACTTGGAGGTTGTGTCGATGAACTTGAGGCTgattgattatttatcaaacgCACCATTGACTCTCACCATGATAAAATCATTGGTCACATCTCCATAGTGAACGAATCCACCCAGGGGGTTGATGCTCTTGTTGGACAGATCATATTCAGTGGAGGCATTGTTCTTCACCAGCTTTCCATCCTTTGTGTGGTAGCCCTGGCCAATCTTGTAGATCTTCTTGTTGATCTCTGTACGGTGGTGGTAGCCCTTCTGACCAGCACGGGCCACAGAGAAGGCCACACGGGCAGGATGCCAGGCTCCGATACAGGCCACCTTACGCAGACCACGATGGGTTTTACGGGGAAGCTTCTTTGTGTGCCATCGGCTGGTGACACCTGGGAGGATAAGAGGTTTGTTAGAGTCCAGACTAAATACAGATTTAACCAAAAGTGCATGTGACAACTTAAATATAGCTGCTTTTACCCTTGTATCCGTGACCCTTTGTGATACCAATCACGTCGATCATCTCGTCCTGAGTGAAGACTGTGTTGATAGGGACGGCCTGCTCCAACTTCTCACGGGCCCAGTCCACCTTGTCAGAGATGTTGCCACCGTTCAGCTGCACCTCCATCAGGTGAGACTTCTTCTGCGCCAGGGGCAGCAGACGCATCTGCACAGATATAATTCAATGAGAACAGAGAAAATATCCACAACATAATTAACCTGTACAGTGAGTAGTTCAGCTGTGTAGTCTCAGAAGGAAGGCAGCATGGAAGGTATCCTCATATAAGTCGGGCGCCATGCCTGACGCAAGATCCGTGGTCTCATCACAGACAGACAACCAGTAAACCTCACTCATTGGTAATCTAATAAACATGCTAACCTGTGTGTGGGCAATGATACGGATGACCTGGCAGTACTTCTTCATGGAAGCAAAGTCCTTCTCCAGCTGCTTCTTGCCATCATCATCCTGCCATTTCTTGCAGTACTTTGTGAAGGCCTTCTTCTTGGACTTGTACCTGAGAGCACACAGTGCAGAGAGGACATAGGTTGGCACAGGTCCTTCATAACCCCAAAGGGCTAGCGGAAGAACACTGTGCATAGCTTCTCGCCCTCCCCTCCATGCGGACAGGGATGCTGCATCAGCTAATGATTTCGGCTCATGGCACAGTTTCTAAGAAGCTCTTTCCACTGGCCAGAGGAGCCCGGAGCTCATCAGGGCACATGGCACCTGAGCGGAGCTGCCACAGGGGCCACCGTAATGTTAGACTCACTCAGTGAAAatgcaaatatttaaaatttccACTGTGCAACCAACACCTGCTTCAAACACTAGTAGAAGTAACTGTATAGCATCTCACCAGTTCTTGTAGAACCGACGCTTGCACTCATCACTGACGTGCTCAGCGAAGATGGTCTTGAAGGAACGCAGGCCTCTGGGTGTTTCGACGTAACCCACAACTCCAACAACAATCATGGGTGGCGTCTCCACAATGGTCACAGCCTCAACCACTTCTTTCTTGTTCACCtctg

Function

NR:

description
60S ribosomal protein L3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU213190 True 1740 lncRNA 0.48 3 22411892 22414160

Neighbor

gene id symbol gene type direction distance location
grna LOC104954377,LOC107096383 coding downstream 10294 22391023 ~ 22401598 (-)
rundc1 rundc1 coding downstream 21930 22383156 ~ 22389962 (-)
ifi35 NA coding downstream 35015 22370539 ~ 22376877 (-)
LOC120574469 NA coding downstream 65387 22340635 ~ 22346505 (-)
LOC120574468 NA coding downstream 108384 22295190 ~ 22303508 (-)
cacng2a cacng2,LOC102214005,LOC100710835,LOC103372897,LOC101463732,LOC108237679 coding upstream 21783 22435943 ~ 22505090 (-)
eif3d NA coding upstream 141852 22556012 ~ 22566132 (-)
sstr3 LOC103373988,LOC100710302 coding upstream 163909 22578069 ~ 22598203 (-)
fam83fa LOC103373437,LOC104946498,LOC104934493,LOC107082014,LOC100708334 coding upstream 233224 22647384 ~ 22669539 (-)
grap2a LOC104946499,LOC103373439 coding upstream 258130 22672290 ~ 22690657 (-)
G157330 NA non-coding downstream 30440 22377944 ~ 22381452 (-)
G157300 LOC100690097,LOC101482526,LOC102787595,LOC104954386 non-coding downstream 157222 22252930 ~ 22254670 (-)
G157287 LOC108237768,LOC103368180,LOC100690364,LOC107378484,LOC103144947 non-coding downstream 192478 22212170 ~ 22219414 (-)
G157205 NA non-coding downstream 312360 22099308 ~ 22099532 (-)
G157203 lrrc4b,LOC102785919 non-coding downstream 323468 22087911 ~ 22088424 (-)
G157337 NA non-coding upstream 21143 22435303 ~ 22435878 (-)
G157357 NA non-coding upstream 159677 22573837 ~ 22574108 (-)
G157358 NA non-coding upstream 160209 22574369 ~ 22574604 (-)
G157459 NA non-coding upstream 422506 22836666 ~ 22839222 (-)
LOC120574445 NA non-coding upstream 453930 22868090 ~ 22869552 (-)
G157147 cdhr2 other downstream 555876 21849095 ~ 21856016 (-)
LOC120575106 LOC103367329,LOC107658449,LOC107564019,LOC107674165,LOC104934486 other downstream 655701 21754741 ~ 21756191 (-)
G157096 LOC102782282,LOC100692966,LOC103367351,LOC107084765,LOC104927186,LOC102201015 other downstream 671189 21734382 ~ 21740703 (-)
LOC120574354 NA other downstream 693163 21715014 ~ 21718729 (-)
G157034 NA other downstream 788931 21621030 ~ 21622961 (-)
G157384 LOC102296880,LOC102202593,LOC101475579 other upstream 211626 22625786 ~ 22639389 (-)
LOC120575271 LOC104967158,LOC103366161 other upstream 394376 22808536 ~ 22834656 (-)
tmem100a tmem100,LOC104954564,LOC101486137 other upstream 1031202 23445362 ~ 23448560 (-)
cbx2 cbx2,LOC104963701 other upstream 1113284 23527444 ~ 23534409 (-)
G157645 LOC103366762 other upstream 1718888 24133048 ~ 24138023 (-)

Expression


Co-expression Network