G158551


Basic Information

Item Value
gene id G158551
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 27799515 ~ 27801912 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU214912
AGTCATTACTTCCAACTAggaggttatatatatatatacacacacacacatttgtgaaggggaaaaaaacagaacacGTTTTCACATTGTGACACATTGTTTGATTCCAGTTTAAGTTTGGAATGACCTTACCGTTACTGTACATGCTCTTTATGCGCTCTGAAAGGAGTCCACATCCTTGAGGAGTTATCAGCCCTCACACCCGACCACTTTGAAGAAGCACAGATGATGCAAAATGATATGAACGCATACTTGTAACCTTTGCTGAGGGGATTCAACTTAACCGAAGCCGAATCCTATTTGAAGTAATTAAACGTACCCCATCTGACTCAACTACGTACAGTCACTTGAAGCGGTCGTTTGTCTCTCTGATGTTAAAAAGAAGAGAATTACAGTGAACAAAATGTCAGGAAAGTCTGCATTTTCAACATCTTTAACCTCGGtgcaatataaataaagagTTAAGTGGATCATCTACGGTTTCTTTCATACCTGTAATTTGGTATATTTAGTTTCGGGCcaagaaaaaaaaccaacaacgtTGTTGCGTTTTATTTCTGGTCCGTTTCACGTTCGCGCGCGTTACAAATTAACCAACATGAAGTCATTTGGACTGACACGTAACTCGTTCGTTGGACAGCTCCGGTGATGTCATCTTGCATCACCAGCACTGGACCCATTTAAATGATGACAAACGGTAGAAATGGCAGGTGCTACAGCAGATCACACACACGATACACGTCAGCACACGAGCTGAACGAGAGGGTTCTtcaagggtaactaccgttatTTAAACATGGACCCTGTtttcctatgtgtttgtgtctaagtgactggtaggaacaacaatctttgaaactggtccagtataatacagtgaacgctgtaaccagcagccacagaccgggcaGCAATGttaccctatggggcaaatgtgcatcgttagtttggtccactaaaagtgcttaaATTactattctaagtgtctgacaacattatggaaaggatccctacagagagagacctttaaaacctctttgagacctttcggTTTAACCAGAAACTGCTCTGAGGTCACTAgagctaaacccaccagactccatttaaaaaaacaatacttttagcgtgtatagaaccaacatattttcacatgtaaatcagtaaactatgtgtttatttcaaacaaaactagagttgtgatggttggaaaagtggaaagacgacttaaaacggcttttcatagtttttattttgtttctgtcgactttgaatgaagtgtattttacgatgctaaaatcactgtttatttacatggagtctggtagctTTAAGCAAACGCAATTTCGCGCAGGTTtttatgcttaaaaaaaaaaaaaaaaaaaaaggatcttactctttaacagaaaggtcgaccgtCATCCGTGTCTCAAGTAAAGGGGCAAAGCAGGAATGTGCTATGTGTAGCATTTCAATGCCGACAAATCATAACCATGATTATGATATATCTGCTAACCACTACGCTGCATCTTTCCTTAGCTGTCAAATCGGTTTCATTACTTTACAGCATGGAAGTGGAACTGTATATGAAGGTAACACAAGCTCCCGTTAGCATACTGTGTCACATTAATACACATATTTACTGTTAACGACTGCTTTTATACTTCTCCTTGCTTTTCAAAACCAATGGAGCAATGCCCTCTTTGAAGGCTGCAGTGGGGCTCATGGGATATGTAGTCCTAATTTTGGGAAATGCTAAATGCTACACATAGCTCCTTACAGACTTGTTAAAAACATGTCTCTTTCTTCGTCTCTCTTAAATACCTATGCAAAGCAGCTGCCCTGCCACTATCAAGACCTAAGCTGAACATAATACTACAGACAGTGGGTGTTGGATGCTCTAGTACAATTACCCAAAGAATTAGCTGGAAGGTCTCCTTATATGGTCATAGAGAAGATCTCCAACCCGctggaccaatcagaggaggGATGGCCGAAAGGTAGATGAGCGCAGAAAAGAATTTCTCTCCTCCAGTCTTTCCTCATCCATGATTTCTTGTTtcatctccttctctcttcttttctccgCTTCCTACTCGTCTACccatctctttcttctttttttttttttttttttttttttttttttttttttttttttttcgccagTAGTAGCGTGTTGTGAGTACCAGTCATTGTCAGTCATCTGAACCAGCTCGTTGACCACATCCAGCAGGTTGTAGTTGTATTTCTTCAGCAGCCGCTGGTTCAGCGGCCGATCCCCAAAGCCCATCTCCACCAGCACGGCCATCATGGTGTCCTGAGTGGACGCGTCCACTGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU214912 True 2340 lncRNA 0.41 2 27799515 27801912

Neighbor

gene id symbol gene type direction distance location
LOC120575474 NA coding upstream 25331 27761978 ~ 27774184 (+)
hao1 hao1 coding upstream 128457 27664253 ~ 27671058 (+)
sept12 LOC104934564 coding upstream 260826 27438277 ~ 27538689 (+)
jupb LOC103359554,LOC100701331,LOC102214474,LOC101475556 coding upstream 913213 26740037 ~ 26886302 (+)
LOC120574712 LOC102077703,LOC102789758,LOC102295644,LOC101478841,LOC107104997 coding upstream 1309826 26484137 ~ 26489689 (+)
zgc:86896 LOC104927173,LOC107391795,LOC103363450,LOC103393532 coding downstream 57911 27859823 ~ 27872407 (+)
wipi1 NA coding downstream 74223 27876135 ~ 27907407 (+)
slc16a6b LOC103363453 coding downstream 111828 27913740 ~ 27928660 (+)
rgs9a rgs9,LOC101473220,LOC102302237,LOC101080113 coding downstream 160110 27962022 ~ 27998962 (+)
LOC120574550 NA coding downstream 255738 28057650 ~ 28062795 (+)
G158550 NA non-coding upstream 1190 27798034 ~ 27798325 (+)
G158549 NA non-coding upstream 1784 27797049 ~ 27797731 (+)
G158548 NA non-coding upstream 5541 27793762 ~ 27793974 (+)
G158541 NA non-coding upstream 35594 27763680 ~ 27763921 (+)
G158420 NA non-coding upstream 258783 27540400 ~ 27540732 (+)
G158553 NA non-coding downstream 2793 27804705 ~ 27805294 (+)
G158592 NA non-coding downstream 129125 27931037 ~ 27931273 (+)
G158593 NA non-coding downstream 131100 27933012 ~ 27934506 (+)
G158594 NA non-coding downstream 133211 27935123 ~ 27982455 (+)
G158596 NA non-coding downstream 146950 27948862 ~ 28010553 (+)
smg1 smg1 other upstream 137892 27601793 ~ 27661623 (+)
LOC120575279 NA other upstream 398547 27399876 ~ 27400968 (+)
G158291 nsf,LOC101477540,LOC102297066,LOC100697603 other upstream 1171479 26575639 ~ 26628036 (+)
G158276 NA other upstream 1329748 26455638 ~ 26469767 (+)
LOC120575027 NA other upstream 1708507 26089652 ~ 26091008 (+)
G158612 NA other downstream 246600 28048512 ~ 28052449 (+)
G158767 gps1 other downstream 724923 28526835 ~ 28532630 (+)
rras rras other downstream 937756 28739668 ~ 28767614 (+)
prrg2 NA other downstream 974161 28776073 ~ 28781350 (+)
mettl22 mettl22 other downstream 1085006 28886918 ~ 28915929 (+)

Expression


Co-expression Network