cdipt (cdipt,LOC103363963)


Basic Information

Item Value
gene id cdipt
gene name cdipt,LOC103363963
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 1325679 ~ 1334426 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823701.1
AAACTTGACATTTCGCTGCTGTGAAGGAGGAAGTCATCGCTTAGCGAACATCCAGCTGTCGCTTTTAGGGAACAAAAAGACGACAGAATacatcatatataatatatatatttatataatatatatatacccaaACATCCAACATGGCGGAGGAAAATATCTTCTACTTTGTCCCCAATTTAATTGGTTACGCCCGTATCGTGTTGGCGctgctctccttcctgctgatGCCGTGCTGCCCGTGGCTCGCCGTCTTCTTCTACCTGCTCAGCGCTCTGCTGGACGCCTTCGATGGCCACGCAGCACGGGCTCTCAACCAGGCCACTAAGTTTGGAGCCATGATGGACATGCTGACCGACCGCTGTGCCACCATGTGTCTGCTGGTCAACCTGGCGCTGCTCTACCCGTCCTACACCTTCCTGTTCCAGCTCAGCATGTGCGTGGACATCGCCAGCCACTGGCTACACCTGCACAGcTCAACAATAAAAGGATCGACCAGTCACAAGACCATCGACCTCTCGGGGAACCCTGTCCTCCGAATCTACTACACATCCAAgCCGGTGCTGTTTGTGATGTGTGCCGGCAACGAGCTCTTCTTCTGTCTGCTCTACCTGCTCCATCACCTGGAGGAACCTGCAGcgTGGCTCTACTGGCTCCAGGGTCTCTGTGGGATCATCTGTCTCCTGAAGACGGGCATCAGCCTCGTCCACCTGGTCACCGCCTCGCAGAACATGGCCGCCCTCGATGTCGCCGAGCGCAGCAAAAACACAAAGACccagtgatagagagagagagagaagagagaaggagagagaaggagagagaaagagagagaaggagagagaaacagagagagagagagagagagagaggg

Function

symbol description
cdipt Predicted to enable CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity. Acts upstream of or within several processes, including camera-type eye development; endoplasmic reticulum tubular network maintenance; and intestinal epithelial structure maintenance. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Is expressed in brain; digestive system; eye; and fin. Used to study fatty liver disease. Orthologous to human CDIPT (CDP-diacylglycerol--inositol 3-phosphatidyltransferase).

NR:

description
PREDICTED: CDP-diacylglycerol--inositol 3-phosphatidyltransferase

GO:

id name namespace
GO:0002088 lens development in camera-type eye biological_process
GO:0060219 camera-type eye photoreceptor cell differentiation biological_process
GO:0008654 phospholipid biosynthetic process biological_process
GO:0007420 brain development biological_process
GO:0010842 retina layer formation biological_process
GO:0016020 membrane cellular_component
GO:0016780 phosphotransferase activity, for other substituted phosphate groups molecular_function

KEGG:

id description
K00999 CDIPT; CDP-diacylglycerol--inositol 3-phosphatidyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823701.1 True 874 mRNA 0.53 6 1325679 1334426

Neighbor

gene id symbol gene type direction distance location
LOC120574280 NA coding downstream 23388 1298376 ~ 1302291 (-)
nlk1 nlk,LOC104935892,LOC100700355,LOC107394986,LOC103393459,LOC101063351 coding downstream 34609 1255759 ~ 1291070 (-)
LOC120573837 NA coding downstream 72314 1252104 ~ 1253365 (-)
tlcd3ba LOC103374918 coding downstream 83418 1217829 ~ 1242261 (-)
LOC120573830 LOC104949076,LOC102775949 coding downstream 158959 1110918 ~ 1166720 (-)
taok2a LOC103363962 coding upstream 7400 1341826 ~ 1383728 (-)
LOC120573831 hspa6,LOC100700083 coding upstream 58066 1392492 ~ 1396468 (-)
LOC120575499 NA coding upstream 94739 1429165 ~ 1445323 (-)
LOC120574716 LOC102301616,LOC103363960,LOC100701445 coding upstream 166346 1500772 ~ 1509112 (-)
LOC120573930 LOC103363959,LOC101479828,LOC102300806,LOC102197709 coding upstream 185960 1520386 ~ 1543410 (-)
G150706 NA non-coding downstream 78449 1244928 ~ 1247230 (-)
G150684 NA non-coding downstream 106599 1218334 ~ 1219080 (-)
G150702 NA non-coding downstream 121851 1203506 ~ 1203828 (-)
G150685 NA non-coding downstream 131207 1192159 ~ 1194472 (-)
G150756 NA non-coding upstream 112247 1446673 ~ 1447187 (-)
G150763 NA non-coding upstream 136404 1470830 ~ 1471233 (-)
G150764 NA non-coding upstream 147317 1481743 ~ 1481973 (-)
G150765 NA non-coding upstream 151176 1485602 ~ 1488314 (-)
G150775 NA non-coding upstream 185264 1519690 ~ 1519906 (-)
LOC120573832 maz,LOC101481851,LOC103375157,LOC102304652,LOC101067998,LOC105024369,LOC102195162 other downstream 3646 1302340 ~ 1322033 (-)
G150705 NA other downstream 85689 1238242 ~ 1239990 (-)
sh2b1 LOC102305267,LOC103374915 other downstream 112113 1153429 ~ 1213566 (-)
G150694 NA other downstream 151656 1170045 ~ 1174023 (-)
G150515 NA other downstream 302117 1022036 ~ 1023562 (-)
LOC120575422 LOC106675350 other upstream 122321 1456747 ~ 1460981 (-)
LOC120575421 LOC106675350 other upstream 126916 1461342 ~ 1465308 (-)
LOC120574289 NA other upstream 257263 1591689 ~ 1739925 (-)
LOC120574287 col1,LOC108233705,LOC103393603,LOC106536191 other upstream 271789 1606215 ~ 1620471 (-)
G150856 NA other upstream 389696 1724122 ~ 1739481 (-)

Expression


Co-expression Network