LOC120573873 (hn1)


Basic Information

Item Value
gene id LOC120573873
gene name hn1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 11299207 ~ 11309655 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823761.1
GGATCTGGTCTTCGTTATGTTCAGTCAGTGTCGGGTGGAGTCTACATCCCGTCGTAGCTCTGCGGGGAAGGAGGAGGACTGTTTTTTATTACTTTCTCATTGAGTATTTGTTATCGCCGAGGCATCGAAATACTCCATTAAAATGACGACAACAACCACCTATAAAGGAATGGAACCTGGTTCTAAAAGCAGTTCCAGGGTACTACGACCGCCGGGCGGAACCTCCAGCATCTCCTTCGGCACGGACGACAACTCAACCCCCCGCAAGGACAAGATGGCCTCCAACATCTTTGCAGAACCTGAGGACCCCCATGCTCATCGGAGGAACAATCCACCCACTGGGGCAGCCGCAGGAACCATCTGTGGGGAGCCCTCAGCTCCACTTAGACGATGCCAGCAGCCCCTTCTCTTCCCCAAGAACCCTGAACCGGAACTGACCACCATCCACAACTCTGGGGCAGCCTTGGTCTGGAACCAGAGACGAGAGGTTGTGAATGGCCAACAACCAGCAAATGATGAGTGTCCTGACAATGTGGAGGTGGAGCAAGAGGAGCCAGAGCAGCACAAGGAGACGACAGAGCCCGCTGCCCCGTCGGGAGGTGCCAACGCTGCCACTGGCGGCCGGAGAAACCCACCTGGTGGCAAGTCCAGCCTCATCCTGGGTTGAAACcacttgcttttgtttttcattcgaatgctttttttttttttgtttttttttaagataaatacCCCCACCacactcttcttcctcctcatcaacTTGTCACCTTCTTCACATGCACTCACGCTGTCACGTCCATGGACCCCTGTGTCCTCTCCCTCCACCCTCAAACCTTTTGTTTTGATCCTTTTTTCtattaaaagaagaaaactgTTGACAAAAGCACTTTATGTATCGCTCTCCCCCTCTTCCATTTCAGGCCATCCTGTAGTGCATCGCGCCTGCTGGAAAAGGCATGACGTTTAGCTTGTCCTTCATTCTTCCCTGTTGTAAAtggtaaaggaaaaaaaaaataaaaaagatttgaTGCGTGGATTTCTAAATACAATAAAGATTGATATGAA

Function

NR:

description
PREDICTED: hematological and neurological expressed 1 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823761.1 True 1068 mRNA 0.49 5 11299207 11309655

Neighbor

gene id symbol gene type direction distance location
LOC120573949 NA coding downstream 5496 11289866 ~ 11293711 (-)
LOC120574065 NA coding downstream 35486 11172521 ~ 11263721 (-)
LOC120574485 NA coding downstream 214634 11081719 ~ 11084573 (-)
c15h17orf75 clg4h17orf75,clg8h17orf75,LOC102789701,LOC101467397,LOC102229770,LOC106934014,LOC106960136 coding downstream 235357 11057892 ~ 11063850 (-)
LOC120574053 LOC104934592,LOC103360693 coding downstream 282616 11008642 ~ 11016591 (-)
LOC120573874 sumo2 coding upstream 1023 11310678 ~ 11318550 (-)
gga3b gga3 coding upstream 18614 11328269 ~ 11338111 (-)
mif4gdb mif4gd coding upstream 31602 11341257 ~ 11347860 (-)
LOC120574850 LOC104918874,LOC100703643,LOC101483703,LOC106903613 coding upstream 52224 11361879 ~ 11410495 (-)
LOC120574851 NA coding upstream 78409 11388064 ~ 11391242 (-)
G154036 NA non-coding downstream 26359 11271819 ~ 11272848 (-)
G153987 NA non-coding downstream 225431 11069043 ~ 11073776 (-)
G153943 LOC104934589,LOC102791985 non-coding downstream 263691 11033206 ~ 11035516 (-)
G153950 NA non-coding downstream 339686 10950571 ~ 10959521 (-)
G153937 NA non-coding downstream 391599 10905355 ~ 10907608 (-)
G154088 NA non-coding upstream 42548 11352203 ~ 11352565 (-)
G154115 NA non-coding upstream 157253 11466908 ~ 11467112 (-)
G154163 bri3,LOC104946088,LOC103141671 non-coding upstream 220041 11529696 ~ 11557733 (-)
G154173 NA non-coding upstream 330373 11640028 ~ 11641512 (-)
G154175 NA non-coding upstream 333462 11643117 ~ 11649924 (-)
G154033 NA other downstream 73661 11203450 ~ 11225546 (-)
tnrc6c1 LOC103361861 other downstream 161679 11098316 ~ 11137528 (-)
LOC120574486 NA other downstream 218600 11078545 ~ 11080607 (-)
LOC120574455 NA other downstream 507642 10784112 ~ 10791565 (-)
gtpbp1 gtpbp1,LOC104924447,LOC102799794 other downstream 909031 10352158 ~ 10390176 (-)
LOC120574419 NA other upstream 776330 12085985 ~ 12090981 (-)
cep112 NA other upstream 1117849 12427504 ~ 12565471 (-)
LOC120575506 LOC100697827 other upstream 1425789 12735444 ~ 12737483 (-)
iqck NA other upstream 1645319 12954974 ~ 12972829 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other upstream 1663605 12973260 ~ 13012781 (-)

Expression


Co-expression Network