LOC120573875 (LOC104929518,LOC103375462,LOC108242957)


Basic Information

Item Value
gene id LOC120573875
gene name LOC104929518,LOC103375462,LOC108242957
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 8513629 ~ 8520587 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823763.1
CGGCggaggaagcagcagcagcagcagcagcagcagctgtctaCTTTCTGAACATAATTTAGACTGTTTGTAATCTGTGTTATAGCCTACTGCTGCTTTGGGGAGCCTTTATAATAAATCAGTTGTGGCCATAGTGGCTGCTGCCTGCCAGTGTCCATCCATAAACTAAACTGCCGTCCAGCGCGGAGTCAGAGCGACGTCACGCGGCTGGGAGAGGGCGTCAGTGCGCCTTCACGAGCTTCACACACGCTGTGGCGTGTTTACCGAGTGGAGAGTTTGATCCGACTTGCAGAGCGCATGTGGACACTCTGTCACCCTGTCTGGGACCGAGCAGACAATGAAGAGCAGCGACAGACCTGGTCTCCGTTTCTTTCTCTGACTGTATTATATAAGATGAGAGCCTTTGTGTTGGGACTGATGAGTTCAGGAGGATTTCTGAAGGGAACATTAACAGTTTACACAGAAGAAATGTCCACAACTGCAAGTCCAACCATCCCCTCCTCACAGCTGACATCGGATCAACTCACAGTGGTCGCTGCATCCTTTTCTTCTCTGGTGTTCTTTGTGGTCATTGTGGTGCTGCTGTCCATCATTTACCGCAAGGATCTTCAGTGCTGCAAACTCCGCTCCTATCATGGGCCACATGCAGATAtgGATGCTCCTCCTCAGTACTacagcagcagacagacactGGTGGGATCTCCTTGTCTGGAGCAGACTCAGATCATGGATGACAACAACACTCAGcaGGCAGGTCAGCTGTTCTACGTCGGCCTGCCCTCCAGCTACAGCCTGCCGACGCTGGAGGCCCCCCTGCCGAGACTCCCCTCCTACGAGAGCGTCCGAAAGAAGGACCGCCAGAGGCAGATCCACCTAATGATCGCAGACCGCTTCGGCCTCAATGGACCCATTGTGACTGAGCCTCCTCCAACATATGAAGAGAGTATCCGCCAGTCAATGGAGCTGCCGTACAACATTCTCTCATCCGGTCTGGACATCTCCCCTCCTCAGAGTACGTACACCAACACAGGGCCCGACACACATCATCCAGTCAACTGTGATAACACCAATAGCACTGTTCTACATGTGTGATTACTGAGCAAGCATCTCAAGCTGTCTGATGAATGTGAAAGGCACGTGATAGCTTTACAGATGAAGTTACCAAAAGAACACAAGTGTTGAAGATTGGATCACGTCTGGGTCCTTCACACAAGCTGATTCACATACCTCAAGAAGGCTGAGTTTATCTTGAGTGATAGCTGATAAAAAGAGCAACCATAAGGACACATTTGGCTTGGCACGTTTGAATGTTAAAAACACTTTGTGACAGTTACACTCTGCCATGCTGATACATTTTAGCAGAGAATCACTGGATATTAACAGTATTGATTATTGAGGTGGCTGGAACACCTTGAAGAAGAAAGTTGTGGACTACAACATACCAAGAAGGAAACCACTATTTACTTTGTTGATTATACTTTCAGTCAACACTTGTCTTCTCTTTTATTGTGCTGTTCCTAAAACCAGAGACTTCATTGTCTGGATTATAAGATTATTGGAGAACTGTTTGTGTCTATGTCAAACATAGACATTTCTATGTCTTCTAGAAGGCGCGGACCGCTCCAGTCGCCTCTCTGTCAGCTCTGCAAAATGTATTATGAATTGTCTAATTTACAAATATTAGTTGTCTTTGATGTGGTTGACATTGGATGGTGATGGCGTGTGGCTATGAGTCGGTCATCAGAATCAGGAAATCAACTTTCCAGTCTCCTGCTCCGGCACTCTGCTAACCTGGGCTAGCAGTCAAGTGTAAACATCAGAGTGAATACAGAGGCAAATGTAAGGCCTATCAGCTACGACCTTTGGTTACGATCCCGACTACTTGGACGAGCAAGACCATCTTTACATCCGTCTCCATCTCTAGGGAGGGCACCGGGGCAAGCGTGGAGGAATTGAACACTGACTGCGACTTCTCTGGATTCCAACGGGATGTCGGGACCATGGTGTCCTGTTGCAGAGACTTGGCTGGATCTTTGAGTGCTGGTGCCTTTCAACCGGAtgactctttttctgtgtgccgATCTGACGGCCACATTCTGCTTTATAATGAAACATGCGcaagttgaaggagctgatgggattacatttcaATGGAATTATACCTCgtacgatttcatgtgacaaataaaattgattcaATCGATTGATTGACTATTGATGATTGATGATTAatgattgattgactgactgattgTTTGACTGACTGATTGATTCTTTACCCCTAACAAAGTTGTGCTATACTTCCATACAGCATGTGATTCATCCTGTGAGAGGGAGAACTACACAAGGTGCTAATGAGTGTGCCTTCCATGAAGTTATAttcagacatactgtatatcccgAGAAATTTtaccacacatttttttttctgttgaggCAGATGGGACTCTTGATCATTTCACACTTTTGCCTAGCTAGGACAGAAACATTGATTAGTTTGTTCTGTTCTCTAAGAACAGGCGTCACAGAGCACAGCGAAGTGGAGTGAAatgaaaacagcgaagaaatacCAAGTTCCTTGTCGAGACctgctttgtttttctttatcctACAAAGTTATTCTCTGCAACCTATCATGTACACACGGCAAATGTTTGTCCTGCACATtgtcatgtactgtatttatagaAGCAAAATGAGTGACTCctgaaacaaatgaaataaatacttttcttgttttgtt
>XM_039823764.1
GCggaggaagcagcagcagcagcagcagcagcagctgtctaCTTTCTGAACATAATTTAGACTGTTTGTAATCTGTGTTATAGCCTACTGCTGCTTTGGGGAGCCTTTATAATAAATCAGTTGTGGCCATAGTGGCTGCTGCCTGCCAGTGTCCATCCATAAACTAAACTGCCGTCCAGCGCGGAGTCAGAGCGACGTCACGCGGCTGGGAGAGGGCGTCAGTGCGCCTTCACGAGCTTCACACACGCTGTGGCGTGTTTACCGAGTGGAGAGTTTGATCCGACTTGCAGAGCGCATGTGGACACTCTGTCACCCTGTCTGGGACCGAGCAGACAATGAAGAGCAGCGACAGACCTGGTCTCCGTTTCTTTCTCTGACTGTATTATATAAGATGAGAGCCTTTGTGTTGGGACTGATGAGTTCAGGAGGATTTCTGAAGGGAACATTAACAGTTTACACAGAAGAAATGTCCACAACTGCAAGTCCAACCATCCCCTCCTCACAGCTGACATCGGATCAACTCACAGTGGTCGCTGCATCCTTTTCTTCTCTGGTGTTCTTTGTGGTCATTGTGGTGCTGCTGTCCATCATTTACCGCAAGGATCTTCAGTGCTGCAAACTCCGCTCCTATCATGGGCCACATGCAGATAtgGATGCTCCTCCTCAGTACTacagcagcagacagacactGGTGGGATCTCCTTGTCTGGAGCAGACTCAGATCATGGATGACAACAACACTCAGGCAGGTCAGCTGTTCTACGTCGGCCTGCCCTCCAGCTACAGCCTGCCGACGCTGGAGGCCCCCCTGCCGAGACTCCCCTCCTACGAGAGCGTCCGAAAGAAGGACCGCCAGAGGCAGATCCACCTAATGATCGCAGACCGCTTCGGCCTCAATGGACCCATTGTGACTGAGCCTCCTCCAACATATGAAGAGAGTATCCGCCAGTCAATGGAGCTGCCGTACAACATTCTCTCATCCGGTCTGGACATCTCCCCTCCTCAGAGTACGTACACCAACACAGGGCCCGACACACATCATCCAGTCAACTGTGATAACACCAATAGCACTGTTCTACATGTGTGATTACTGAGCAAGCATCTCAAGCTGTCTGATGAATGTGAAAGGCACGTGATAGCTTTACAGATGAAGTTACCAAAAGAACACAAGTGTTGAAGATTGGATCACGTCTGGGTCCTTCACACAAGCTGATTCACATACCTCAAGAAGGCTGAGTTTATCTTGAGTGATAGCTGATAAAAAGAGCAACCATAAGGACACATTTGGCTTGGCACGTTTGAATGTTAAAAACACTTTGTGACAGTTACACTCTGCCATGCTGATACATTTTAGCAGAGAATCACTGGATATTAACAGTATTGATTATTGAGGTGGCTGGAACACCTTGAAGAAGAAAGTTGTGGACTACAACATACCAAGAAGGAAACCACTATTTACTTTGTTGATTATACTTTCAGTCAACACTTGTCTTCTCTTTTATTGTGCTGTTCCTAAAACCAGAGACTTCATTGTCTGGATTATAAGATTATTGGAGAACTGTTTGTGTCTATGTCAAACATAGACATTTCTATGTCTTCTAGAAGGCGCGGACCGCTCCAGTCGCCTCTCTGTCAGCTCTGCAAAATGTATTATGAATTGTCTAATTTACAAATATTAGTTGTCTTTGATGTGGTTGACATTGGATGGTGATGGCGTGTGGCTATGAGTCGGTCATCAGAATCAGGAAATCAACTTTCCAGTCTCCTGCTCCGGCACTCTGCTAACCTGGGCTAGCAGTCAAGTGTAAACATCAGAGTGAATACAGAGGCAAATGTAAGGCCTATCAGCTACGACCTTTGGTTACGATCCCGACTACTTGGACGAGCAAGACCATCTTTACATCCGTCTCCATCTCTAGGGAGGGCACCGGGGCAAGCGTGGAGGAATTGAACACTGACTGCGACTTCTCTGGATTCCAACGGGATGTCGGGACCATGGTGTCCTGTTGCAGAGACTTGGCTGGATCTTTGAGTGCTGGTGCCTTTCAACCGGAtgactctttttctgtgtgccgATCTGACGGCCACATTCTGCTTTATAATGAAACATGCGcaagttgaaggagctgatgggattacatttcaATGGAATTATACCTCgtacgatttcatgtgacaaataaaattgattcaATCGATTGATTGACTATTGATGATTGATGATTAatgattgattgactgactgattgTTTGACTGACTGATTGATTCTTTACCCCTAACAAAGTTGTGCTATACTTCCATACAGCATGTGATTCATCCTGTGAGAGGGAGAACTACACAAGGTGCTAATGAGTGTGCCTTCCATGAAGTTATAttcagacatactgtatatcccgAGAAATTTtaccacacatttttttttctgttgaggCAGATGGGACTCTTGATCATTTCACACTTTTGCCTAGCTAGGACAGAAACATTGATTAGTTTGTTCTGTTCTCTAAGAACAGGCGTCACAGAGCACAGCGAAGTGGAGTGAAatgaaaacagcgaagaaatacCAAGTTCCTTGTCGAGACctgctttgtttttctttatcctACAAAGTTATTCTCTGCAACCTATCATGTACACACGGCAAATGTTTGTCCTGCACATtgtcatgtactgtatttatagaAGCAAAATGAGTGACTCctgaaacaaatgaaataaatacttttcttgttttgtt

Function

NR:

description
PREDICTED: uncharacterized protein LOC104929518

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823763.1 True 2743 mRNA 0.46 5 8513629 8520587
XM_039823764.1 False 2738 mRNA 0.46 5 8513629 8520585

Neighbor

gene id symbol gene type direction distance location
LOC120575363 LOC103375241,LOC104929519,LOC102212394,LOC101477022,LOC102794201,LOC102305637 coding downstream 1789 8506317 ~ 8511840 (-)
recql5 recql5,LOC102306769 coding downstream 8790 8488379 ~ 8504839 (-)
cdr2l LOC100699057 coding downstream 28937 8474480 ~ 8484692 (-)
nptx1l LOC103375324,LOC104929529,LOC100699861 coding downstream 211358 8297738 ~ 8302271 (-)
LOC120573855 NA coding downstream 371796 8137584 ~ 8141833 (-)
rabep2 rabep2 coding upstream 106496 8627083 ~ 8640435 (-)
si:ch211-11k18.4 LOC101474882,LOC102302894 coding upstream 131045 8651632 ~ 8659219 (-)
nudt9 nudt9 coding upstream 139715 8660302 ~ 8665654 (-)
mapk8ip3 mapk8ip3 coding upstream 219044 8739631 ~ 8768700 (-)
jpt2 hn1l coding upstream 252277 8772864 ~ 8778762 (-)
G153112 NA non-coding downstream 43336 8468304 ~ 8470293 (-)
G153106 NA non-coding downstream 58961 8450022 ~ 8454668 (-)
G152925 NA non-coding downstream 220372 8293038 ~ 8293257 (-)
G152924 NA non-coding downstream 221414 8291900 ~ 8292215 (-)
G152863 NA non-coding downstream 421360 8087926 ~ 8092269 (-)
G153124 NA non-coding upstream 19791 8540378 ~ 8588188 (-)
G153127 atp2a1,LOC102238060,LOC106906942,LOC103469116 non-coding upstream 30709 8551296 ~ 8611997 (-)
G153130 atp2a1 non-coding upstream 91690 8612277 ~ 8616112 (-)
G153142 NA non-coding upstream 124197 8644784 ~ 8645025 (-)
G153143 NA non-coding upstream 126496 8647083 ~ 8647291 (-)
G152952 NA other downstream 69248 8441179 ~ 8444381 (-)
LOC120574885 LOC103375378,LOC104925605,LOC104966930 other downstream 413231 8082138 ~ 8100398 (-)
grin2aa grin2a,LOC102780805 other downstream 789715 7569718 ~ 7723914 (-)
arhgdig NA other downstream 1712093 6772880 ~ 6801536 (-)
G152567 NA other downstream 1792986 6719784 ~ 6720643 (-)
G153172 mrps34,LOC102799846 other upstream 210810 8731397 ~ 8733019 (-)
natd1 natd1 other upstream 291743 8812330 ~ 8816305 (-)
tufm tufm,LOC106606342,LOC101070424,LOC106606341,LOC106931188,LOC103145412 other upstream 329856 8850443 ~ 8857571 (-)
zgc:55558 p-ras,LOC105029053,LOC104950842,LOC104930345,LOC103392975,LOC101069736,LOC106606379,LOC103023536,LOC108413997 other upstream 375195 8895782 ~ 8907662 (-)
LOC120574599 NA other upstream 666663 9187250 ~ 9204006 (-)

Expression


Co-expression Network