LOC120573957 (LOC104960327,LOC108241277,LOC101068065,LOC104918611,LOC102777936)


Basic Information

Item Value
gene id LOC120573957
gene name LOC104960327,LOC108241277,LOC101068065,LOC104918611,LOC102777936
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 15507726 ~ 15509964 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823880.1
CAACGGAAGAAAAACAAGATGACCGTCCCTGAGTAGATTCCTTGTTGGTTCACACAACGGAAATAGTCAAAACGCCCCCTAAACTTCTGGCACTGCGTTGTTAGTATTAGTACTACTGTAATTCTATACATCCATGCTATAATTCCACTAAAATTAGCTGTGGGAAATAACCATGGAAGGTAAGTTAAAGAAAGAGTTGGGAACAGCCATGCTGAAGTCAACCGGTCACTCAGGTGGTGGATGTATCAGCGAGGGCCAGAGTTATGATACCGACACTGGGAGAGTGTTTGTGAAGATAAATCACAAGAGCGAGgcCAAATTGATGTTTGATGGTGAGATGGCCAGTTTGGAAGCCATTTTAAAGACAGAAACTGTAAAAGTCCCCAAGCCTGTGAAGGTGGTTGAGCTTGACACAGGAGGATGTGTATTTGTAATGGAACACCTGGACATGAGAGGTCTTACCAAGTACTCAAAGCACCTAGGAGAGCAGCTGGCAGATCTGCATGTTCACAACAAGAGACAGTTGGAAACATTTAATAAAGAGCACCAGACAGTGGGAAAAGGAGCTGGACAGTCGGAGGTGGCTGTTGTTGAAAAATTTGGCTTCAGTGTACCTACATGCTGTGGATATCTACCACAGGAAAATGAGTGGCAGGATGACTGGGTGACATTTTACTCCCagcagaggctgcagcaccaGCTTAACATGGTGGAGAAATCTTATGGAGACAGGGAAGCTATAGAATTATGGGCCCAGCTACAGCTGAAGATCCCTCAGTTTTTCAAAGATGTAGAGATTGTTCCTGCTCTCCTCCATGGAGACCTATGGGGAGGCAACGTAGCACAGTGTACGATGGGCCCAGTCATCTTTGACCCAGCCTCCTTCTATGGCCATTCAGAGTATGAGCTGGGTATTGCAGGGATGTTTGGTGGCTTCAACAGCTCTTTTTACTCTGCTTACCATGACAAGATTCCTCAAGCACCAGGCTTTGCAAAGAGAAACCAGCTTTACCAACTCTTCCACTATCTGAATCACTGGAACCACTTTGGTGGTGGCTACAGGGGCTCTTCAATAAGTATTATGAAGAACCTACTGAAATAATTGCACTCACATTTACTTGTAGAAAGCTTAACAATCTTAAACTAAAaccaaatatatgtatatattgacAGATGttaattgaccaaaataatatgGCTAATTGTTGAAGAGACTAAACATAATACTATAACATTGTAATGTATGTTATATTGTGTAGACAATACAGAATCAACATAACAAAATATTTCTACCCTGTCTGCTCTACCTACACCAACCTGCTTCCAAAATCCACATCTTTCAGTTACTATCTGAAATTCTGTGTTTGaacgaatat

Function

NR:

description
PREDICTED: ketosamine-3-kinase-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016772 transferase activity, transferring phosphorus-containing groups molecular_function

KEGG:

id description
K15523 FN3KRP; protein-ribulosamine 3-kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823880.1 True 1376 mRNA 0.42 6 15507726 15509964

Neighbor

gene id symbol gene type direction distance location
tbcd NA coding downstream 2272 15476359 ~ 15505454 (-)
LOC120573906 acsf2,LOC102294907 coding downstream 83523 15417045 ~ 15424203 (-)
LOC120574866 acsf2,LOC102294907 coding downstream 92116 15404920 ~ 15415610 (-)
LOC120574947 rnf222 coding downstream 114523 15391738 ~ 15393203 (-)
hs3st3b1a LOC104940293,LOC103361242,LOC104959450,LOC101483888,LOC100697618 coding downstream 161166 15334362 ~ 15346560 (-)
epn3a epn3 coding upstream 2388 15512352 ~ 15522509 (-)
rsad1 rsad1,LOC102775824 coding upstream 20481 15530445 ~ 15534526 (-)
zgc:103625 LOC104960319,LOC103356288,LOC100689735 coding upstream 47116 15557080 ~ 15558737 (-)
trnae-cuc_25 NA coding upstream 54169 15564133 ~ 15564204 (-)
gcgra LOC103367158 coding upstream 95539 15605503 ~ 15645622 (-)
G155151 NA non-coding downstream 103157 15368229 ~ 15404569 (-)
G155126 NA non-coding downstream 194134 15312080 ~ 15313592 (-)
G155106 NA non-coding downstream 345291 15156429 ~ 15162435 (-)
G155047 NA non-coding downstream 522362 14985134 ~ 14985364 (-)
G155039 NA non-coding downstream 543880 14963233 ~ 14963846 (-)
G155232 LOC104918633,LOC103356299,LOC102214648,LOC102291995,LOC101464722,LOC100701808 non-coding upstream 16985 15526949 ~ 15527605 (-)
G155234 LOC106925874,LOC103468796,LOC106529779,LOC106946608 non-coding upstream 31593 15541557 ~ 15544017 (-)
G155239 NA non-coding upstream 41040 15551004 ~ 15632836 (-)
G155242 hgs non-coding upstream 44079 15554043 ~ 15554886 (-)
G155295 NA non-coding upstream 172405 15682369 ~ 15691652 (-)
metrnla metrnl,LOC102778978 other downstream 58209 15443124 ~ 15449517 (-)
LOC120574278 LOC104940298,LOC103361237,LOC102197797,LOC102781856,LOC104946382 other downstream 367873 15106757 ~ 15139853 (-)
LOC120573850 LOC106674513,LOC106098575 other downstream 497386 15009798 ~ 15010340 (-)
LOC120573849 LOC106675063,LOC102783976,LOC102313472,LOC102290019,LOC102295680 other downstream 499014 15003013 ~ 15008712 (-)
ush1ga LOC104944226,LOC103373181,LOC103392806,LOC106949104,LOC104925058,LOC103140944 other downstream 618244 14879627 ~ 14889482 (-)
tecra LOC103367165,LOC101076261,LOC106932487,LOC104960308,LOC108241336,LOC106529633,LOC103151989 other upstream 207883 15717847 ~ 15724422 (-)
LOC120574537 NA other upstream 231799 15741763 ~ 15745572 (-)
LOC120574502 LOC103367168,LOC100699371,LOC108241234,LOC101473146,LOC106529605 other upstream 236827 15746791 ~ 15788515 (-)
G155323 LOC108415010,LOC101162128,LOC104945817 other upstream 303094 15813058 ~ 15815369 (-)
LOC120574545 chchd5 other upstream 643823 16153787 ~ 16156067 (-)

Expression


Co-expression Network