zgc:171844 (LOC103359992,LOC107094641,LOC100711370,LOC102309406,LOC102193574,LOC101465794)


Basic Information

Item Value
gene id zgc:171844
gene name LOC103359992,LOC107094641,LOC100711370,LOC102309406,LOC102193574,LOC101465794
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 3643493 ~ 3656060 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823897.1
CATCTGGTCGGCAGCCCTCCTCCCGTTAGATTCCCTCACACGTCACAGCAGTTCTGCATGGACTTAGTCGATAGGCCTGCCTTTTTAATATCAATTCTCGAGCTGCAcaaatatttactttaatttttCTGCGCAGTGTCTTAAAAAAAAGGGGAGTATTTTTGAACAATatggaaaaagagaggagatCGTCTAAACAGTACGGCTCTCTGGAGAAGACGCAGGTGGACACAGCGACGGAGAAACCGACAGAGGATGTCATTTCCATGGCTGACTCCACGATTACCATCGAGGACATCGAAGGAGAGCTGTGCAAAATCGACCGCATAAGAGACATCCTCGTACGGAGGGAATCGGAGCTGCGATACATGATGGATGACATCCAGCTCTGCCGAGAAATCACGAGGCTGAAGACGGAGCTGCAGCAGCTTGTCTCGACTCCAGACGATGATAAGTCCAAGgcggacagagagagggaggaagagctgCTGCAGCAGGTCAACAAGCTGGTGGAGACCAGAGACTTCCTGGTGGATGACGTGGAGTTTGAGAGGCTCAGggaaagagaggaagacagagaaatggCCGTCTTCTTACAGTCCAAATTTCCCAAGACATTGGCTGCAAAAGGTGCTTCGCAAGATCAAAACGTGGCGTCCAAATCCCAGCAGACGGCGCCGTTCAGTAAAACTGGACTCACACTGCTGAAAGACTGCTGTGGCTTCACCTGCTCCATCAtgtaatactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtctggcGTACTAGCAGTCACCTTTTGGCGGAATGGACCGCCATCTGGCACtgcctgtacccggctcacagtcacttattggcggctaaacacaACTACCAACTGCCGCTAATACGAaggagctctgtagccggcgAGCAAAGCTCTGTAGTTGgcatcacgtgaccagccggtgGTCGCCTAGTTTTCGTAGGAAATCATAcgaattggtgtgcatacatttaaCGTACATATTACATACGTACAAACCCGTTTATGAGAAAGTGTTGCAGAAGTAggaatttggtgtaaacagcATTACTGATCTTGAAACGAAGGTGATATTTCCCCAGTAACAGAACTTTTGCTCCACCGATTTGCcggtccagtcagagagacacaaagttgaagaaatttaaagcaacactatagagaacttttcccgcttcggtccccctacagttTGGAAGCGGAATTATCCCATTATGTCTCACTGGAACTACAGATCctctacccgatctggcaaacttgcatagtgcggttatagccgatagagaGCCGCAAagtgaatgcagaagtgccgttcaccctgttacgagatGATGAAcaactgaaacgattttggaaacattattttatgttACAAAAAGTtatttagtgttgctttaactggCTGGAGCCTCATAATTCCCCTCTACATAAAAATTGTGTCACTAAAGGACACCATTAGCGCTCACATCTCTGTTGTTGCACTGTAAACCTGAATGCGCAAATGAATTAACTGGAGTATTGTAAACTTACAGTTTGTTAAGAAGTTCTACTTACTTAAAACATATTGTTGAGTTACGGTTAATTAATACGTTAAGTTTTTATACTTAAAATTATTCTGTTATGTTAATTTAATACTTTCGAGTTGCATTTTACTGATTTTTTAGTTAGCTTAATTGGTATTTTAATTTAACGGTaatcaaaaaatgcaagttGATGTTACTCCACATATTTAAGCTCTAGCAACGTCAGACTTTTAAGTTTATAAACTCAACAAATGTGTGGCAACTGATTGCCAAAACTTTTTAGAGTACTGCTTACttattcgggtttacagtgtatttaAGTCATAattttgcttttgtgttttggaCTTACAAGGTTTTTGCCCAACAGCGACGATATATTATGTGATTTACTGCTGTGAAATACTGTGTTTAAAGTCTAGCAGAGAGGAAGCTGACTGCCTAATACTAATGCTTTCTGTCTAATTAATGTAATTAGATACTATTATAGTTGCTCTGACCTTCTGTTTGGGATGGATTAGCTGTTAAAGACTCACTGAGGGAACAAACTACACTTGCTGTAGTTTGTTCTGTATTGAGTATTATTGTTAGGCTTGTGATTACGTTTGTTTTTGATTATTGGGAGTggtttcatctttttttccttATTCAGTTAATCGTTGGGGCCATCAAAATGTTACAGTTAGCATTAGCAGCGGAGGAGGGGAGATGCCGTATATGAAAATGAcaattttatgaataaaataaaaatgcagacCTTTGTACTTTCTGTTGGTCATCCGATGTAGACACAGTTGAGCAGATTTATGCAGAAGGCTGTCTCGCAAATATTGTTCATTTCTGTTTGCTACTCAGTTACTCAGCAGGCCACAAGTTAAACCAAAGTCAGATATCTGATCCGGATGTAATTAGTCATTAAGTAATATGCCTTAAAAGAGAAAATGTGTATTCTTTTCTGTGACTGTAGAATGTATCATCTTTTGCAATGCTGTTTTGTTTCGGCCCCTTTGGAGCTTCATCAAGAGTATTTAAAAATCTTGAGTATTTGGATACTCTTGATGAAGGTCCAGA
>XM_039823898.1
CTAAACAGTACGGCTCTCTGGAGAAGACGCAGGTGGACACAGCGACGGAGAAACCGAGCCAGGTAATTAAAAGCGGATCCGAGCTCTGCTGGATGACTCATCGTTGCCCCTGGAGAGGAGTAGGAGGCTGCAGGAGGCAGGAGGCAGGCAGTGCAGATATTCAGTGATGCTTGAAGAATGACTGGGGCAGAGGATGTCATTTCCATGGCTGACTCCACGATTACCATCGAGGACATCGAAGGAGAGCTGTGCAAAATCGACCGCATAAGAGACATCCTCGTACGGAGGGAATCGGAGCTGCGATACATGATGGATGACATCCAGCTCTGCCGAGAAATCACGAGGCTGAAGACGGAGCTGCAGCAGCTTGTCTCGACTCCAGACGATGATAAGTCCAAGgcggacagagagagggaggaagagctgCTGCAGCAGGTCAACAAGCTGGTGGAGACCAGAGACTTCCTGGTGGATGACGTGGAGTTTGAGAGGCTCAGggaaagagaggaagacagagaaatggCCGTCTTCTTACAGTCCAAATTTCCCAAGACATTGGCTGCAAAAGGTGCTTCGCAAGATCAAAACGTGGCGTCCAAATCCCAGCAGACGGCGCCGTTCAGTAAAACTGGACTCACACTGCTGAAAGACTGCTGTGGCTTCACCTGCTCCATCAtgtaatactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgtctggcGTACTAGCAGTCACCTTTTGGCGGAATGGACCGCCATCTGGCACtgcctgtacccggctcacagtcacttattggcggctaaacacaACTACCAACTGCCGCTAATACGAaggagctctgtagccggcgAGCAAAGCTCTGTAGTTGgcatcacgtgaccagccggtgGTCGCCTAGTTTTCGTAGGAAATCATAcgaattggtgtgcatacatttaaCGTACATATTACATACGTACAAACCCGTTTATGAGAAAGTGTTGCAGAAGTAggaatttggtgtaaacagcATTACTGATCTTGAAACGAAGGTGATATTTCCCCAGTAACAGAACTTTTGCTCCACCGATTTGCcggtccagtcagagagacacaaagttgaagaaatttaaagcaacactatagagaacttttcccgcttcggtccccctacagttTGGAAGCGGAATTATCCCATTATGTCTCACTGGAACTACAGATCctctacccgatctggcaaacttgcatagtgcggttatagccgatagagaGCCGCAAagtgaatgcagaagtgccgttcaccctgttacgagatGATGAAcaactgaaacgattttggaaacattattttatgttACAAAAAGTtatttagtgttgctttaactggCTGGAGCCTCATAATTCCCCTCTACATAAAAATTGTGTCACTAAAGGACACCATTAGCGCTCACATCTCTGTTGTTGCACTGTAAACCTGAATGCGCAAATGAATTAACTGGAGTATTGTAAACTTACAGTTTGTTAAGAAGTTCTACTTACTTAAAACATATTGTTGAGTTACGGTTAATTAATACGTTAAGTTTTTATACTTAAAATTATTCTGTTATGTTAATTTAATACTTTCGAGTTGCATTTTACTGATTTTTTAGTTAGCTTAATTGGTATTTTAATTTAACGGTaatcaaaaaatgcaagttGATGTTACTCCACATATTTAAGCTCTAGCAACGTCAGACTTTTAAGTTTATAAACTCAACAAATGTGTGGCAACTGATTGCCAAAACTTTTTAGAGTACTGCTTACttattcgggtttacagtgtatttaAGTCATAattttgcttttgtgttttggaCTTACAAGGTTTTTGCCCAACAGCGACGATATATTATGTGATTTACTGCTGTGAAATACTGTGTTTAAAGTCTAGCAGAGAGGAAGCTGACTGCCTAATACTAATGCTTTCTGTCTAATTAATGTAATTAGATACTATTATAGTTGCTCTGACCTTCTGTTTGGGATGGATTAGCTGTTAAAGACTCACTGAGGGAACAAACTACACTTGCTGTAGTTTGTTCTGTATTGAGTATTATTGTTAGGCTTGTGATTACGTTTGTTTTTGATTATTGGGAGTggtttcatctttttttccttATTCAGTTAATCGTTGGGGCCATCAAAATGTTACAGTTAGCATTAGCAGCGGAGGAGGGGAGATGCCGTATATGAAAATGAcaattttatgaataaaataaaaatgcagacCTTTGTACTTTCTGTTGGTCATCCGATGTAGACACAGTTGAGCAGATTTATGCAGAAGGCTGTCTCGCAAATATTGTTCATTTCTGTTTGCTACTCAGTTACTCAGCAGGCCACAAGTTAAACCAAAGTCAGATATCTGATCCGGATGTAATTAGTCATTAAGTAATATGCCTTAAAAGAGAAAATGTGTATTCTTTTCTGTGACTGTAGAATGTATCATCTTTTGCAATGCTGTTTTGTTTCGGCCCCTTTGGAGCTTCATCAAGAGTATTTAAAAATCTTGAGTATTTGGATACTCTTGATGAAGGTCCAGA

Function

NR:

description
uncharacterized protein C16orf45 homolog isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823897.1 True 2667 mRNA 0.42 6 3643493 3656060
XM_039823898.1 False 2605 mRNA 0.42 7 3643493 3655868

Neighbor

gene id symbol gene type direction distance location
tom1 tom1 coding downstream 10892 3617009 ~ 3632601 (-)
gcat gcat coding downstream 28649 3596298 ~ 3614844 (-)
mcm5 mcm5,LOC102783740,LOC106927661 coding downstream 49237 3575537 ~ 3594256 (-)
foxred2 foxred2 coding downstream 81686 3549227 ~ 3561807 (-)
ankrd54 ankrd54 coding downstream 94461 3543024 ~ 3549032 (-)
mfsd6l NA coding upstream 5051 3661111 ~ 3666455 (-)
pik3r6b NA coding upstream 13759 3669819 ~ 3689399 (-)
LOC120575475 NA coding upstream 35386 3691446 ~ 3715227 (-)
mchr1b LOC103359996,LOC101467517,LOC102311886,LOC100690541,LOC102197681 coding upstream 313733 3969793 ~ 3972398 (-)
trnas-aga_11 NA coding upstream 374119 4030179 ~ 4030260 (-)
G151515 NA non-coding downstream 120703 3522352 ~ 3522790 (-)
G151399 kri1,LOC102780649 non-coding downstream 262828 3375879 ~ 3380665 (-)
G151398 NA non-coding downstream 263955 3379186 ~ 3379538 (-)
G151376 NA non-coding downstream 316126 3327144 ~ 3327367 (-)
G151375 NA non-coding downstream 321014 3322193 ~ 3322479 (-)
G151561 NA non-coding upstream 307988 3964048 ~ 3964411 (-)
G151615 NA non-coding upstream 399154 4055214 ~ 4112189 (-)
G151633 NA non-coding upstream 426858 4082918 ~ 4083681 (-)
G151639 LOC103360002,LOC100712452,LOC105013158,LOC102214151,LOC101470166,LOC106937022,LOC103143670 non-coding upstream 474744 4130804 ~ 4165498 (-)
G151691 NA non-coding upstream 612270 4268330 ~ 4268654 (-)
G151344 smarca4 other downstream 326578 3311727 ~ 3316915 (-)
G151227 LOC103393680 other downstream 728126 2911326 ~ 2915367 (-)
G151216 LOC106957010,LOC107376217,LOC103393680 other downstream 747150 2873918 ~ 2896343 (-)
G151146 NA other downstream 838082 2399809 ~ 2805411 (-)
farsa farsa other downstream 1481769 2132732 ~ 2161724 (-)
LOC120575464 NA other upstream 705788 4361848 ~ 4367343 (-)
LOC120575466 LOC102292836,LOC101471904,LOC100692969,LOC103393382,LOC103468414,LOC102212070,LOC103143659,LOC102784177 other upstream 760117 4416177 ~ 4464991 (-)
LOC120574081 grin2b,fmc1,LOC102794452,LOC102794917 other upstream 929113 4585173 ~ 4765493 (-)
G152043 cdc42ep1,LOC102301584,LOC102206375,LOC102078793 other upstream 1522256 5178316 ~ 5227241 (-)
G152114 rbx1 other upstream 1805786 5461846 ~ 5464418 (-)

Expression


Co-expression Network