LOC120573971 (LOC104964789,LOC103361754)


Basic Information

Item Value
gene id LOC120573971
gene name LOC104964789,LOC103361754
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12221169 ~ 12226568 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823900.1
CTAGTCACAGTGTCGCGTCGCAGCAGCGCGTGGAAGTAGCCTGCTCTCGGTAACTGACAGACGGACTTTCTAGCCATGCACTACCGTCCACTTCAGTCTGAATTTGTATCTTCATGTGGATGAGATGTTGCcaaatgtgattattttgatGTGCATCCTGAGTCTTCAGTTACAGCACTGCGCGGCTGATCTGTGCAACTGGACTGGGAGCGGTTTTGCAGCTGGTGTGGACTCCAGGATTGTCCTCCAGGTGCAGTTGCGCTGTACAGAGGGCTCGGTGAAGTGGATATACCCTGGCCAGGCTCTCCGGGTGGTCCTGGAGCCCAATCTGTCCTCCTCCCAGAGCACCACTGTCTGCATCAAACCGTCTCCCTCTTTCCGTGGAGCCAGCGTGTTCATTGAACGAGCCGGGGAGCTGGAGCTGCTGGTGACAGAGGGCGGGCGGCCCGAGCAGCAGGTGTTCTGTTTCCGGGCGGATGGTCCGCACAGGCCCGCAATCTACCTCCAGTCCAGACCGCAGAGTGATGGACCCTGGAGCAGACGCACGATGGGCTTCAGATATGAGCTGCTGGGCAACAGGACTGCTGCACCCAACGTGGGCCACAGCGGGCTTCAGGCTTCATGCCGACCCTGCAATGACACAGAACTCCTCATGGCTATCTGCAACAGTGACTTTGTGGTCCGAGGCCTCATCGAGAAAGTCTCCCATGACTCTGAACGTCAGACGTCGCTGGTGGAGGTGTCAGCAGCAAGGGTGTACTGGCAGCGCAGTGGAGTGTTTGAGCAACAAGCAGCTGCCTCTGGGTCACCTCGGTCCGTCCCGTCTTGGCGTGGACACATCCACACACTCCTGCAGTGCCACGTGAAGCCTGGGGATGGAGAGTTTCTCTTCACAGGGTCAGAACACTTTGGGGAAGCTTGGTTAGGGTGTGCCCCGCGATACAAAGACTTCCTGTTTGTCTACCAGACTGCCTGGGCAGCACGACGGAATTCCTGTGACTTCCCTTTAGACTGAGGAAGTGTGTTGTTTTAGCCCTACTACTGAAGCTGGCCAGTCTTTATCCACAGGCATCCTCACCCCTGTCCTGGCACTGTGGGATCCCTGTGATGTTGTCGTGTGACAGCAAGGTGGCATCTAGCATCAACAGCATGGACGAAGCTATTGAATTGCTGGTAAAATACACATTTGGAGGAGCAGAGCAGAAGCAAACAGCAGGGCCTCCTGCCCTGAGGCCCAGAGAGGACCTGCCTTTGTCTCCCTCCCATCAGTGCCCTCAGTCCTGGGAGACCGAGAAGGGGTTGGGTTGCTGCTCTCTCTTTGTGCTTCTCCCCACATCAACCGTTGTTCACTTTGCTGGCTCTGTGTGACAATTGCCCCCTCAACTGAGGTGGGAGGGAAGACTAAAGCACGGCCATTCATAATCGCCAGTTTGTCCTATAGCGAATAGGCTTTTACATATATGATTGTGAAGTTATTTTTATACTGATTCATCTTAAGTTTCAAATCctctttgttttgtctgttgtaCTCTTTTAATTAAATACCTTTGCATCTAACTCAGGATTATTGTGTTTATAATGCAAaataaatcctccacta

Function

NR:

description
PREDICTED: meteorin-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823900.1 True 1600 mRNA 0.53 4 12221169 12226568

Neighbor

gene id symbol gene type direction distance location
arhgap17b LOC103361731,LOC100693200,LOC102795553,LOC101468818 coding downstream 7510 12186097 ~ 12213659 (-)
narfl narfl coding downstream 78852 12138068 ~ 12142317 (-)
fahd1 fahd1 coding downstream 92571 12127467 ~ 12128598 (-)
LOC120574725 NA coding downstream 137465 12080475 ~ 12083704 (-)
LOC120573975 LOC104957814,LOC103361744 coding downstream 145352 12062780 ~ 12075817 (-)
cbx4 cbx4,LOC102794988,LOC102309824,LOC102204981,LOC101467610 coding upstream 2549 12229117 ~ 12244745 (-)
tbc1d16 tbc1d16 coding upstream 48799 12275367 ~ 12297433 (-)
gaa gaa coding upstream 71749 12298317 ~ 12307166 (-)
samd9l LOC102078066,LOC102793943,LOC102205815,LOC102308574,LOC101466743 coding upstream 83181 12309749 ~ 12320264 (-)
LOC120574755 ern1 coding upstream 94026 12320594 ~ 12341283 (-)
G154305 slc5a11,LOC102796461 non-coding downstream 37344 12183611 ~ 12183825 (-)
G154275 NA non-coding downstream 65357 12131386 ~ 12155812 (-)
G154248 rps2 non-coding downstream 165965 12052806 ~ 12055204 (-)
G154246 NA non-coding downstream 198665 12022297 ~ 12022504 (-)
G154245 NA non-coding downstream 198979 12021527 ~ 12022190 (-)
LOC120574757 NA non-coding upstream 134671 12361239 ~ 12373994 (-)
G154368 NA non-coding upstream 173684 12400252 ~ 12401475 (-)
LOC120574719 NA non-coding upstream 340610 12567178 ~ 12567810 (-)
LOC120574718 NA non-coding upstream 341651 12568219 ~ 12568696 (-)
LOC120574720 NA non-coding upstream 450925 12677493 ~ 12679110 (-)
LOC120574419 NA other downstream 130188 12085985 ~ 12090981 (-)
G154033 NA other downstream 995623 11203450 ~ 11225546 (-)
tnrc6c1 LOC103361861 other downstream 1083641 11098316 ~ 11137528 (-)
LOC120574486 NA other downstream 1140562 11078545 ~ 11080607 (-)
LOC120574455 NA other downstream 1429604 10784112 ~ 10791565 (-)
cep112 NA other upstream 200936 12427504 ~ 12565471 (-)
LOC120575506 LOC100697827 other upstream 508876 12735444 ~ 12737483 (-)
iqck NA other upstream 728406 12954974 ~ 12972829 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other upstream 746692 12973260 ~ 13012781 (-)
prkar1b prkar1b,LOC107661853,LOC107653458 other upstream 1108881 13335449 ~ 13421951 (-)

Expression


Co-expression Network