LOC120573975 (LOC104957814,LOC103361744)


Basic Information

Item Value
gene id LOC120573975
gene name LOC104957814,LOC103361744
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12062780 ~ 12075817 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823903.1
GagcgcagcagcagagaggaggagtCACTCCGTCAACTGTCGGCCTCCCGAGTCTAATCTGGATTAGAGTTCCGTCCGGTCTACGCTCCCAGTAATCCCATCCCATATTATTCTGTATTGGGTTGACGCCTCCTGAAGCAAGCGGGACGAAGAAGCGACGTCGAACGGTGGCGACGCGTTTTGTTTATCTTAAAGCTGAACTGTTTATTCGGATGCAATCTTTTTGAGGGAGTTTGGGCGATTTTGCAACGAAGAGTGGCTACAATCGGAGCGAAGTTGAGCGAATATTTGTTGCCTGCGGTCGGTGGATGGTGCGCATCTGTGGATGCAGCACACCGCGCTCTGCAGCATCCACGCTGATCACTGATCACTGCAGCCTGCACTTGAACCACATTTCGACATGCCAGATTCAGCATCCAAAATGATGGACAATAAGATACCCGGGGAGGTCGTTACAAGTCTACATGCAGTCAAAGACTCCCAGTGCTAGCGCCATGCTCCATGTCTTCAGGGACACCGTTTGGTCCACCACATTTTCACAGTAGCTCCTGGTTGACTGCCAGCATGGAAGACAGCAAGCTCATCTTCAGCCTGGACGGCCACAATGACGGTCCCATCGTGGCCTTTTCCAAAGACAAACCGCAGGACCGGGCGAGCCAGCCTAACATCAGCCTGGGGATGGATCTGGACCTGAGCCTAGGTCACCACTCCCAGTCCCCCTTCCTGTCTCACTCCCCCTCATCCCCGGGCTCTTTAGCTGATCTGTCAGCATCATCAGCAGATCTGCTTGTCACCACCAACCTGGTCAAATCCTCCTCCACAGACCTGAAGCCGAGGGAGAGCAGCTCCCTGCGAGGCAAACCTCTGCTCAGCTTGGTCAAGTCCCTGAGCACCGAGATTTCTCGCCGGGTCGAGCCAGAGGTCAACCTCTCCAAGTCAGACTCCAAGTTGCATTTGCATCCCTGGAAGCAGCTTCCCTGTCCGAAAATCAGGTCTGAAGCAGGAGAGCTGAATGAGAATGATGACTGGGTATCACCTCCTTCCACAGGCGGCATACCCCCCCCTGAACCTCGGGGAAGCTCTCTGATTGCTGAGCTGGAGGACACACGGAGGAAGTTCTCCGAGGCCATGCAGGATCCGCTGAGCATGCTGAGTAAGATTATGGGGGACGAAAGCCCCGGCAGCCCCAAGCAGGGGAGGGCTTCTTGTGCCGGAGACTCCCCGTCCTCCCAAGGCAGCTGTGGAAGAGACGGGGGTAGTGAAGATGCAGACCTTAAGTGCCGGAGGAGAGCTGAAGGGGAGCACAGAGGTGTGTGTGACACGCCTCTGAGACGACTGCAAAAGGGCTCCTTAACGAAATCCTGTGTCTCCCTAGAACGCCACAGAAGTGACAGCCATTTAGAAATGCGTACTTATGGAGATAAGATTCAGGCGTTGGAGCTCCAGAATGGGTCCAGAGGGAAACATCATAGAATTTACACCCAGTCTCGAATCACAGTGCCAGGCTCATCGCTGCCTCTTCACTGGCTCTTTCCTGTGGGTCTTCTTGCTTAcggtttctttgtgttgcccCTGCCCTCCTATGTGACTGGTCTGTCCGTGGGGGTTGCTTGCGGCTTTATGTTGGGTCTGGTGGTAGTGTTCATGTTTGCCCCGCAACGCTCATCTGCCAGAAACAACAGGGGCTCTCGTTTCAGTAAATCCAGACCCCTGATCATGGATCCAATGGATGGAGAGCTCACAGATCCAGAAATCCTAGAGGGCTGGATGAATGAGACACTCAGCTACGACCCTGAGACCGTCCACCCCTCCATCACACACTCTGTCTATGTTACCCTTGAGGACAGCCAGCTGCGTCTGGCGTACCCACGTGCTAACATCCCCCGGTGGGCAGCGTTTGATGAGACGTCCCatgaagctgtgtttttgcgTTTCCGCACTTTCAAGCTGGCTAACTGTAAGGTGTCTCTGTTGCCACCTGGTTTGGCCCGCAAGAGGATCTGGAACAGGAAGTACCCCATTTGCATCACTTTGGCTGAAGGAGAGGTAGGGGAGGAGAGTATGGTTGAAgggcaggaggaggaagaaagggCAGAGAGACACGTCATTCAGGACCCCCATTTTCCTGTCACCCTGTACCTGTTTGGCCGCACaggaagagaaaaggaggagtgGTTCCAGCACTTCCTGTCTGCAGCCAAGAGCAGTGTAAGCAGGGAGGAGAATGCAGAAACACCATGTGGTGGAGACGGTGCTAAAGAAAGCACAGAAGAGCTGCACGACTTTCTGGGAGCTATAAAAACAAGAACACTATTGGAGTACAGCACCTACATGACTCAGCTGATTGGCTCGCAGAGCTGCAATCCCACCCTCAGCCCCTGCAATAGTGAAAAAGGAAGCCCCACAACCCACAAGAAGATTAACAATGAAGAGCACGGATCTGGAGGTCAACCTGGAGCTGAGCCCAGTGCAGGTTCATTGGCAGATGGATGCTCTGCAGAAGGCCAACCCACCTGGGTGAACTCCCTGGTAGGACGAATCTTCTGGGACTTTCTGCAGGAGAAGTACTGGACCGATCAGGTGGCGCACAAGATCCAGAAGAAACTCAGCAAGATCAAGTTGCCATACTTTATGAATGAGCTGACTCTGGCTGATCTAGATATGGGCACTTGTCTACCTCAAGTCCTCAGCACCTCCACACCTACACTGGATCGCAGAGGCCTATGGCTGGAGCTGGAGGTGGTGTACACAGGCTGCCTTCAGATGACTCTGGAGACTAAGATGAACCTGTGTAAACTGGGTAAAGATGGAGAGGACGAGGCTCACAGCGTTCTAGAGACACAGCAACTGGGCTCTAAGCCCAGGCTATGTATACTGGCTGATAGTGATGAAGAGTCATCCAGCGCAGGCTCGTCTGATGAAGAGGAAGTCCCCTCTTCTGAGCCACAGGGGTCTCTGGGAGATAAGAACACAGTGTTAGAGGCTGAAGGGCACACTGGTGGCAGCACAAGTAGGAAGATTTTGAGATTTGTGGACAAGATAGCGAAGTCCAAGTACTTCCAGAAAGCCACCGAGAACGAGTACATCAGGAAGAAGATTGCTGAGGTTTCCAACATGCCTCTGATGCTCAGCGTCGAGGTCCTAGAGCTCTCTGGTACTCTGGCCATAAACATCCCACCTCCACCTACTGACAGGATATGGTACAGTTTCCGGGTGCCTCCCAGGTTAGACCTGCATGTGCGACCCACGCTCGGGGAGAGGGAGGTCACCTTCACTCATGTCACTGAGTGGATCGAGAAAAAACTCCAGTGTGAGTTCCAGAAAGTGCTTGTGATGCCCAATATGGACGATCTATATCTGCCCCTGATGACATCTGGCCTGGACAACCCACCTGCATCCCACCAATCCTCAATCCATTCCTCATCCCACCAATCCTCCATGGAGGAGTACCTGTCAGAGTAGTGCCCCTTTGAGGCCACAGATAGGATTATGTCAATGCAAAATAGCCATTGCGTGCAGCGATTGCCATGAATGTCTAATGGATTCGGAGGCTGCTGCAGCTGGGTACCGGCTTCATCCTGAGTGTGTTGGTTGTAACCAGTGCAGGATAGACGACTACCTGAAGGCACGCTGACCACGGCATCGACCTTGCAACTGTGAAAATGGTGTTAAAGTGCCCCCTACTGTGAAGATGATTGAACTGTACACCAGTGACGGCACATTATACACCAAAAGGGAACTTTTTTATTTGATGCCAACACTGATAAAAGATGCAAAAACTGGATGTCTTTACTGCACATAAAACAAGGTTGTCAATGAATTATTATGCTGATTGAACAAACTATGCTAACATCCATTTTCTAATCCACTGATACTGTTACGGGTTGTGAACATGAGATGATAATGGTAATCCTGATGTTGAATCAAGCTACCATGGTGCATGTTATTTCTGAACAGTGTTGATATGCTCATGGATTAATcagtgaataaaaacagaatttatGTTAA

Function

NR:

description
PREDICTED: testis-expressed sequence 2 protein-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823903.1 True 4008 mRNA 0.52 12 12062780 12075817

Neighbor

gene id symbol gene type direction distance location
ndufb10 ndufb10 coding downstream 4979 12055838 ~ 12057801 (-)
tbl3 tbl3 coding downstream 13510 12028027 ~ 12049270 (-)
LOC120574261 tom1l2,LOC104918838,LOC103361751,LOC100706850,LOC102776585 coding downstream 54244 11984719 ~ 12008536 (-)
srebf1 srebf1 coding downstream 79410 11971044 ~ 11983370 (-)
nptx2a nptx2,LOC102777833,LOC101477389,LOC100706047 coding downstream 449494 11601333 ~ 11613286 (-)
LOC120574725 NA coding upstream 4658 12080475 ~ 12083704 (-)
fahd1 fahd1 coding upstream 51650 12127467 ~ 12128598 (-)
narfl narfl coding upstream 62251 12138068 ~ 12142317 (-)
arhgap17b LOC103361731,LOC100693200,LOC102795553,LOC101468818 coding upstream 110280 12186097 ~ 12213659 (-)
LOC120573971 LOC104964789,LOC103361754 coding upstream 145352 12221169 ~ 12226568 (-)
G154248 rps2 non-coding downstream 7576 12052806 ~ 12055204 (-)
G154246 NA non-coding downstream 40276 12022297 ~ 12022504 (-)
G154245 NA non-coding downstream 40590 12021527 ~ 12022190 (-)
G154231 NA non-coding downstream 50300 11969405 ~ 12012480 (-)
G154187 NA non-coding downstream 232597 11829944 ~ 11830183 (-)
G154275 NA non-coding upstream 55569 12131386 ~ 12155812 (-)
G154305 slc5a11,LOC102796461 non-coding upstream 107794 12183611 ~ 12183825 (-)
LOC120574757 NA non-coding upstream 285422 12361239 ~ 12373994 (-)
G154368 NA non-coding upstream 324435 12400252 ~ 12401475 (-)
LOC120574719 NA non-coding upstream 491361 12567178 ~ 12567810 (-)
G154033 NA other downstream 837234 11203450 ~ 11225546 (-)
tnrc6c1 LOC103361861 other downstream 925252 11098316 ~ 11137528 (-)
LOC120574486 NA other downstream 982173 11078545 ~ 11080607 (-)
LOC120574455 NA other downstream 1271215 10784112 ~ 10791565 (-)
gtpbp1 gtpbp1,LOC104924447,LOC102799794 other downstream 1672604 10352158 ~ 10390176 (-)
LOC120574419 NA other upstream 10168 12085985 ~ 12090981 (-)
cep112 NA other upstream 351687 12427504 ~ 12565471 (-)
LOC120575506 LOC100697827 other upstream 659627 12735444 ~ 12737483 (-)
iqck NA other upstream 879157 12954974 ~ 12972829 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other upstream 897443 12973260 ~ 13012781 (-)

Expression


Co-expression Network