tbl3 (tbl3)


Basic Information

Item Value
gene id tbl3
gene name tbl3
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 12028027 ~ 12049270 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039823904.1
GCGCTCAGATGACGTACAATGAGTGCGACTCGGGTATCAACATGCGGGATGGATGTGTTGACTTCAGGCAACGTGTGAAGTGAGAAATAAGTAATTTACATCACCACAGCAACCAAAATATTTAAGTTTGGGTATTTTACGTGAACAAGATGGCAAATACCAACCTTCAATTCAAAACAAATTATGTTGTCGAAAGCAAGATTGAACCTTTTTACAAAGGAGGAAAAGTGCAGATCAGCAAAGATGAAAAGTACATCTTTTGCACTTGTGGATCTCGTGTCAACGTTTTGGAGATCAGCACAGGGAAGATCGTCCACAGTGTGGAGCATGATGATCAAGAGGACATTACATCGTTCACACTCAGCTGTGATGATGAGATGCTGGTAACAGCTAGTAGAGCTCTGCTGTTAAAGCAGTGGGACTGGAGGCAAGCTCAGTGTACTCGCTCCTGGAGGGCCATTCATACTGTTCCTGTAGCCAGTATGACCTTTGACTCCACTTCTACTCTCCTGGCCACAGGTGGCTGTGATGGCACTATAAAGCTTTGGGATGTGGTGAAGCAGTACTGCACCCACAACCTTAAAGGCTCATCTGGCGTTGTGCACCTGGTCCAGTTCCACCCAGACATCAGCAGGCTGCagctcttctcttcctctctagACTGTGGCATTCGGCTGTGGGACCTGCGCTCCAgccggtgtatgtgtgtgctgcagAGCCACTACAGCGCTGTCACCTCACTCAGCTTCAGCCCCGATGGTGGCACCATGGTCAGTTCTGGCAGGGACAAGATCTGTACAGTGTGGGACCTGGAGACTCGGAAAGCCAAGAGAACTGTGCCAGTCTACGAGGCTGTGGAGGGTGTTGTACTGCTGCCTGAGGATAAGGACTTGTCTGAGATTGGAGTGAAGAGCAAAGACTTGCATTTCATCACTGCTGGAAGCAAAGGTGTATTGCGAGTATGGGAGGCCAGCACGGCGCGTTGTGTctacacccagacccccccctcccccctcaccGCTGTCTctgaggtggaggaggagagggacgaCGACCCCCGCAGTCTTACGTTTCTCCTTCATCTGCCCGCCTCCTCCAGACTGGCCACAGTCACAGCAGAACACAACATTGTGCTCTACCAGCTGCCTGGTCTCACCACGCAGCAGCAGTTTGTGGGATACAATGACGAAGTGCTGGACGTGAAGTTTCTGGGTAAAGGGGACAGCCACATCGTGGTGGCCACCAACAGCTGCCAACTGAAGGTGTTTGAGCTGCTCACCAACAGCTGCCAGATCCTCTATGGACACACAGATACTGTCCTCTCACTGGACGTGTTCAAAAAGGGTTTTCTCTTTGCGAGCTGTGCGAAGgACAGGTCGGTGCGTGTGTGGCAGATGGACAGTGACAGTGGACAGGTGCACTGTGTGGCTCAAGGCTCCAACCATGCTAACGCTGTGGGCTCCATCACCTGCTCCAGAATGAAAGCATCTTTCATAGTGTCTGGCAGTCAGGACTGCACTGTGAAGGTGTGGGATCTACCAGCAGACTTATCTACGAGAGGGGCGGACGTACATCAGCTGACCCCCCGTGCCACAGAGAAGGCACACGATAAGGATGTAAACAGCGTGGCGGTGTCGCCCAATGACAAACTGCTGGCTTCAGGCTCCCAGGACCGCACAGCCAAGCTGTGGTCGCTGGCGGAGGAGGGGAACGTGGGCCTGCTGGGGGTGTTTAGGGGCCACCGTCGCGGCGTCTGGGCCGTCTGCTTCTCTCCTGTCGACCAGGTGCTGGCCACGTCCTCCGCAGATGGCGCCACCAAACTGTGGAGCCTGCAAGACTTCAGCTGTCTGAAGACATTCGAGGGTCACGATGCATCGGTTTTGAAGGTCATCTTTGTGAGCCGAGGCACTCAGCTGCTCACCAGTGGCTCAGATGGTTTGGTAAAGCTGTGGACCATAAAGACCAACGAGTGTGTAAAGACGCTGGACGCCCACCAGGACAAAGTGTGGGGTCTCCATGTCAGCCGCAAAGACGACAAGGTGGTGACTGGTTCAGCAGACTCTAACATCACCGTTTGGGTGGATGTGACTGAAGTAGAGCTGGCAGAGGAGCAGGCCAAGCAGGAGGATCTGATACTCAAGCAGCAGGAGTTGTCCAACCTGCTCCATGAGAAGAAGTACCTGAAGGCCCTGGGTCTCGCCATATCACTGGACCAGCCTCACACTGTGCTCACTGTGATCAAAGCGATCCGTCAGGTGGAGAATAGCGGCGAGCTGTTGGAGAAGACAGTACTGAAACTCCGAGTGGATCAGAAAGAGTCTCTCCTGCGCTACTGTGCTGTGTGGAACACCAACGCCAGAAACTGTCAGGATGCCCAGGCCGTCCTCCAGGTGCTCCTCACACACCTGCCACCTGAGGAGATCCTGCAGTATCAGGGCGCCCGAACCCACCTCGAGGGACTCATCCCATACACagagagacacatgcaGAGGATTGGTAATCTGCTGCAGGCGTCCATGTTTTTAAACTACATGTGGCAGAAGATGAGAGTGGCCGGAGCACCATCCAGCATGGGCCAAGACGAAGAAATGGATACCACTCCGCTTGCACAGCCTTTCTTTATGATTGACAAGGAGAAAGGAATGGGCATCAGCGATGATGAGAAACGAGATGGAGATGACAGCGATGGGGGACAAGATGAAGATCCAAATTGCCCAGTTAAagaagcagaggaggaggatgacgaTGAGGTCAGTTCCACCAAGAAAGCCTCCGCTAACGGCGGGCGAGTAGAAAACGGCGAGCGCACCAAAACAAATGGCAACCACCACTCTGAAAGTGAGGAAAGTTCAGCAGAGGAAGCGCTGGAAGAAGAAGATCAAACAACGGTAAAGGTGAAATGTCTCCCTGTTTCTTCCACTCCACAATGCCAGACTTTTGCAAGCTGACGAGGATCTCCAAGCTGGTAACCGATGACTCACTCCCTGAAAATAAAAAACCCAGGAGGGGTGATCTTATCTCGGACCTTTAGCTGGAGTGACTCCCTGAATGATTAGCAGTGcaggaagagatggagagacaggTGTGGAGTGATGGTGATAAATATAATAGGCCTCTCTGTGCATTCCCATGTCTCAGCAGCTCCAAAATACTTTGTCTTGTGACAGTTACTAAATTGTGCATCGGTTCATCCATTCAGAGTTTGAGCAGAATTTGAAGAAACTTAACCATCCTAATTTCCTCAGACAAAGTGGACATTAgggaagaaaggaggagagactGAAGGAAGACAGACCTGCATTAACAATCGGGCATTGAGCCAGGGTTATCCTCCCCCACTGCAGAAACCAGCACCCATtgtctagtttttttttatgttgtgtaGTCCTGATCTACTGGCTCAACCACAACACAAAAGGTTCCTTTCATAACCacagattgtttttttaatgtcatgACTACAAatgtttataaaataaaaatctgttctTTGTGATTTAAAGTTA

Function

symbol description
tbl3 Predicted to enable U3 snoRNA binding activity. Acts upstream of or within lymphocyte differentiation; regulation of cell cycle process; and thymus development. Predicted to be part of 90S preribosome. Predicted to be active in nucleolus. Is expressed in several structures, including brain; eye; fin bud; gut; and hematopoietic stem cell. Orthologous to human TBL3 (transducin beta like 3).

NR:

description
transducin beta-like protein 3

GO:

id name namespace
GO:0030098 lymphocyte differentiation biological_process
GO:0006364 rRNA processing biological_process
GO:0048538 thymus development biological_process
GO:0010564 regulation of cell cycle process biological_process
GO:0032040 small-subunit processome cellular_component

KEGG:

id description
K14555 UTP13, TBL3; U3 small nucleolar RNA-associated protein 13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039823904.1 True 3506 mRNA 0.51 23 12028027 12049270

Neighbor

gene id symbol gene type direction distance location
LOC120574261 tom1l2,LOC104918838,LOC103361751,LOC100706850,LOC102776585 coding downstream 19491 11984719 ~ 12008536 (-)
srebf1 srebf1 coding downstream 44657 11971044 ~ 11983370 (-)
nptx2a nptx2,LOC102777833,LOC101477389,LOC100706047 coding downstream 414741 11601333 ~ 11613286 (-)
baiap2l1b baiap2l1,LOC103367811 coding downstream 439794 11557861 ~ 11588233 (-)
tecpr1b LOC102779071,LOC100705253,LOC102296174 coding downstream 478967 11535030 ~ 11549060 (-)
ndufb10 ndufb10 coding upstream 6568 12055838 ~ 12057801 (-)
LOC120573975 LOC104957814,LOC103361744 coding upstream 13510 12062780 ~ 12075817 (-)
LOC120574725 NA coding upstream 31205 12080475 ~ 12083704 (-)
fahd1 fahd1 coding upstream 78197 12127467 ~ 12128598 (-)
narfl narfl coding upstream 88798 12138068 ~ 12142317 (-)
G154246 NA non-coding downstream 5523 12022297 ~ 12022504 (-)
G154245 NA non-coding downstream 5837 12021527 ~ 12022190 (-)
G154231 NA non-coding downstream 15547 11969405 ~ 12012480 (-)
G154187 NA non-coding downstream 197844 11829944 ~ 11830183 (-)
G154175 NA non-coding downstream 378103 11643117 ~ 11649924 (-)
G154248 rps2 non-coding upstream 3536 12052806 ~ 12055204 (-)
G154275 NA non-coding upstream 82116 12131386 ~ 12155812 (-)
G154305 slc5a11,LOC102796461 non-coding upstream 134341 12183611 ~ 12183825 (-)
LOC120574757 NA non-coding upstream 311969 12361239 ~ 12373994 (-)
G154368 NA non-coding upstream 350982 12400252 ~ 12401475 (-)
G154033 NA other downstream 802481 11203450 ~ 11225546 (-)
tnrc6c1 LOC103361861 other downstream 890499 11098316 ~ 11137528 (-)
LOC120574486 NA other downstream 947420 11078545 ~ 11080607 (-)
LOC120574455 NA other downstream 1236462 10784112 ~ 10791565 (-)
gtpbp1 gtpbp1,LOC104924447,LOC102799794 other downstream 1637851 10352158 ~ 10390176 (-)
LOC120574419 NA other upstream 36715 12085985 ~ 12090981 (-)
cep112 NA other upstream 378234 12427504 ~ 12565471 (-)
LOC120575506 LOC100697827 other upstream 686174 12735444 ~ 12737483 (-)
iqck NA other upstream 905704 12954974 ~ 12972829 (-)
sun1 sun1,LOC104947709,LOC102193096,LOC103360714 other upstream 923990 12973260 ~ 13012781 (-)

Expression


Co-expression Network