gosr2 (gosr2,LOC102776032)


Basic Information

Item Value
gene id gosr2
gene name gosr2,LOC102776032
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 18418345 ~ 18421933 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824053.1
GCTTTCCTATTTCCGTACACAAACGCTCTGCTGATGACGTGTACACTCCACCACCGttagctggctagctagctagcttagccaCCTGTCAGAATAAAGGGGTTTTAAATAAAGTAACGCTACAACGCAAGGGGAAACAGTGCTACAACAAATCACGGAAGATGGAGACGCTTTACCATCAGACAAACAAGCAAATCCAGGAGGTGCAGTCTCTTATGGGACATCTGGAGAAGACGGATCGTCAGTCAGTACACTTGTTAGAGAATGAATTGCAGACTAGAATCGACCAGATCTTCAATCATTTAGAACGCCTCGAGATCCTGGCCAGCAAGGAACCACCAAACCGCCGCCAGAATGCCAAATTGCGAGTGGACCAGCTCAAGTATGATGTCCAACACCTTCGAACCGCCCTGCAAAATTTCCAGTACCGAAGCTACGCCAGAGAGgcccaggagagagagagggaggaactaATGAGCCGTACCTTCACGACCAACGACGCAGATACCTCCATCCCCATAGATGAGACCCTACAGTTAAACTCCAACTTGCACAACGCACACAGAGGCATGGATGACCTCCTGGGCAGCGGCAGTAGCATTCTCAATGGTCTGAGAGATCAAAGATCTACACTAAAGGGGACCCATAAGAAGATGTTGGATGTGGCCAACATGCTGGGGCTGTCTAACACAGTGATGCGACTGATAGAAAGGCGAGCCACCCAGGATAAGTTCATCATGATTGGAGGCATGCTGTTGACCTGCATCTTCATGTTCCTGGTAATCAGATACCTGGGCTGACCGCCATCCATCCACAGCGGCCGTTGTGATCAGTCGTGGACCTTTCTGCAGCACATTATCCCTCACGATGTGAAAAGTGGCAGAATTGAATTTTTAACATCcgatttgaatatatttttaatagtgccaatatagtttttttcccccccaccatttaaattattttgagcACCTGCAAAATGGTAAGGTTGAAGACCTTAATTACATTCAGTATTTTATTCCACTTGAAGCTACAATAGAGCATTGGACTGTATCATAGGTCTGCTGCTTTCCTCAGATGACTACCACAAATCCATAACCTAGTCTTTTTATCAAAACCACTTCATCACTCTTGTGACTACCCAAATGGCTTTTTCAAAAATACTTAAACTGATCTTCATACTCTACTTGCTCTTGCCTCCAGTGAaaagctttttgttttgatcctGAATCTGTCAGTGTTATTCTGCCTTGTTGGTTCTTAAATAGAAACATCCTGAAGAATCTTGTTTTAAGTTTATCATGTACATGACAGCAACATGAATCTGTTCTGAAAGACAATGGAAGCAGCAATTCATTTATCGTTAAATTCTTTTTCCAATATAAGCTTGGGTCTAGTCTCACTATGTGAGTGATTGAGttctaatataataaaacatgtttcattTCCTTTGTA

Function

symbol description
gosr2 Predicted to enable SNAP receptor activity and SNARE binding activity. Predicted to be involved in intra-Golgi vesicle-mediated transport and vesicle fusion. Predicted to act upstream of or within protein transport and vesicle-mediated transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of SNARE complex. Predicted to be active in Golgi apparatus; cytoplasmic vesicle membrane; and endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in progressive myoclonus epilepsy 6. Orthologous to human GOSR2 (golgi SNAP receptor complex member 2).

NR:

description
PREDICTED: Golgi SNAP receptor complex member 2-like

GO:

id name namespace
GO:0015031 protein transport biological_process
GO:0005795 Golgi stack cellular_component
GO:0016020 membrane cellular_component

KEGG:

id description
K08496 GOSR2, BOS1; golgi SNAP receptor complex member 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824053.1 True 1455 mRNA 0.43 6 18418345 18421933

Neighbor

gene id symbol gene type direction distance location
map3k14a LOC103374229,LOC104944878 coding downstream 44057 18360270 ~ 18374288 (-)
rps11 rps11 coding downstream 63358 18352460 ~ 18354987 (-)
LOC120575517 NA coding downstream 64180 18354082 ~ 18354165 (-)
LOC120575518 NA coding downstream 64899 18353363 ~ 18353446 (-)
LOC120575519 NA coding downstream 65501 18352761 ~ 18352844 (-)
wnt9b wnt9b coding upstream 9519 18431452 ~ 18437386 (-)
fmnl1a LOC104944896,LOC102200249,LOC102300993,LOC103374236 coding upstream 163792 18585725 ~ 18604084 (-)
LOC120574956 psmc3ip coding upstream 193850 18615783 ~ 18619274 (-)
retreg3 fam134c coding upstream 202703 18624636 ~ 18632409 (-)
plekhh3 plekhh3,LOC102778524 coding upstream 219275 18641208 ~ 18679339 (-)
G156070 NA non-coding downstream 209168 18208897 ~ 18209177 (-)
G156068 NA non-coding downstream 238237 18179839 ~ 18180108 (-)
LOC120574888 NA non-coding downstream 278736 18136090 ~ 18139609 (-)
LOC120574111 NA non-coding downstream 426318 17987780 ~ 17992027 (-)
G156026 NA non-coding downstream 434652 17983482 ~ 17983693 (-)
LOC120574766 NA non-coding upstream 449921 18871854 ~ 18900161 (-)
LOC120574767 NA non-coding upstream 465572 18887505 ~ 18890913 (-)
G156294 NA non-coding upstream 484413 18906346 ~ 18907262 (-)
G156316 stat3,LOC104946400 non-coding upstream 632225 19054158 ~ 19056296 (-)
G156410 NA non-coding upstream 848568 19270501 ~ 19270765 (-)
mrm2 mrm2,LOC102797561 other downstream 154671 18259401 ~ 18263674 (-)
psmg3 psmg3 other downstream 395359 18019945 ~ 18022986 (-)
micall2a micall2,LOC102794725 other downstream 472810 17933568 ~ 17945535 (-)
trnat-cgu NA other downstream 671688 17746586 ~ 17746657 (-)
G155888 hs3st4,LOC104958756,LOC100711185 other downstream 1002504 17415525 ~ 17415841 (-)
G156321 NA other upstream 686966 19108899 ~ 19120932 (-)
G156396 NA other upstream 827793 19249726 ~ 19251256 (-)
si:busm1-163l24.3 NA other upstream 1520034 19941967 ~ 19947921 (-)
hexim1 LOC104946860 other upstream 1877091 20299024 ~ 20300946 (-)
atxn7l3a atxn7l3 other upstream 2642827 21064760 ~ 21071507 (-)

Expression


Co-expression Network