LOC120574053 (LOC104934592,LOC103360693)


Basic Information

Item Value
gene id LOC120574053
gene name LOC104934592,LOC103360693
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 11008642 ~ 11016591 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039824073.1
TGTCTCCGGGTGTACCCGTTAGTTTCTTGACTTTAACACTCCTGCGCAGATCCCGGTTTTTGGCTGCCTTTTCCTCGCCTGTTTTCTGGTCAACATGTCGGAGTATAATGTGGTGCCGCCACCCGGGTCCGGGGCCCCTCTCGGCGGACAGGCGGGTCTTGGGAACGGAGCTGGAGACATCAAGAAAGATGCGTTTGCGGACGCGGTGCAGCGGGCACGGCAGattgcaGCTAAGATCGGGGGTGATACTGGTCCTCCCATGAACAACAACACTGCATCAGATGGCTTTCCATTCACTGCACAGAAACGACAGCTGGAGGATGCAGATGAACCGGAGAGCAAGAAGCTGGCTGCACAGAGTGACTTAGATTCAGCCAATGCATTGTCTATTGGTGCACAGCTAGCTGCTCTTGCACAACAAAGGCCCGCCTACAGCACAGAGGAGTACAGTGTACCAGACAGCATGGTGGGACTCATTATTGGCCGTGGAGGTGAACAGATCAATAAGATTCAACAGGAGTCAGGTTGCAAGGTTCAGATAGCTCCAGacAGCGGAGGCCTTCCAGACAGGAGAGTCTCTCTTACAGGTTCCCCAGACTCCATACAGAATGCCAAGGGGCTGTTGGATGAGATAGTCTCACGAGGGAGGGGTACACCCCCTTCTTCTTATCACGAGTCCACTAACGGGCAGAATGGCACGGTGCATGAGATGATGATTCCAGCTGGCAAGGCTGGTCTTGTCATTGGCAAAGGAGGCGAGACTATCAAACAGCTACAGGAGCGTGCAGGGGTGAAGATGATCCTGATCCAGGATGCCTCTCAGGGACCCAACGTTGACAAGCCCCTGCGCATTATCGGAGAACCCTACAAAGTCCAGCAAGCCCAGGAGATGGTGCAGGAGATTCTGAGGGAGAGAGACCACGGTGGCTTTAGTGAAAGAAATGATTTTGGCCCCCGAATGGGAGGAGGCATGGATATCCCTGTACCAAGACACTCAGTCGGTGTGGTCATCGGGCGCAATGGAGAGATGATTAAGAAAATACAGAATGATGCTGGAGTTCGGATACAGTTCAAACAAGATGATGGGACTGGTCCAGATAAGATTGCTCACGTCAGTGGTCCCCCTGACCGCTGCGAGCATGCTGCCCAGATCATCAACGACCTGCTGCAGAGCATCAGGGTCAGGGAGGAGGGACAGGGGGGTCCCCCAGGTCCTCCAGGCATGCCTGCAGGCAACAGGGGCCGAGGTGGGGGACAAGGCGGTTGGGGGTCCCCTGGAGGGGAAATGACCTTCTCTATTCCTGCCCACAAGTGTGGGCTAGTGATTGGCCGGGGAGGAGAGAACGTCAAGTCCATCAACCAGCAGACCGGGGCGTTTGTAGAAATCTCTCGACAGCCGCCCCCCAACGGAGACCCCAACTTCAAGCTTTTTATCATTCGGGGCTCACCGCAGCAGATCGACCACGCCAAGCAGCTCATTGAGGAGAAGATTGAGGGTCCTCTGTGTCCTGTGGGTCAGGGGCCAGGTGGACCAGGTCCTGCTGGTCCAATGGGTCCCTTCAACCCCAACCCATACAACCCCGGGCCGCCTGGGGCACCCGGACCACCACATGGCGGTCCTCCAGGTCCTCACCAGTACACCCCTCAGGGCTGGAGCAACACCTTCCAGCAGTGGCAGCCTCAGGCACCCCATGACCCCAGCAAGGCAGCAGCCAATGACCCCAACGCAGCCTGGGCGGCCTACTACGCTCAGTACTACCAGCAGCCATCGGGGGCTGTGCCAGCCCAGTACCCTGCTAACCCAGCTGGAGGTGCCCAAACTTCAGGGGACCAGACCCAGCCTGCACAGACGCCGGGGGGCCAGCCAGACTACACCAAGGCCTGGGAGGACTACTACAAGAAGATGGCCCAGGCAGGTGGCTCGGTCCCTGCGACAGCAGCTGCAGCCCCAGGAGCAGCTGGAGGAGCAGCATCCACAACGGGGGGCCAGCCGGACTACAGCGCAGCCTGGGCAGAGTACTACAGGCAGCAGGCTGCGTACTATGGACCGACAGGACAGGCCCCCGGCCAGCCAGCCACTCCCCAGCAAGGACAGACGCAGTGAAAGTTCATGGCAGGAGGTCTTGGGAGAGAATCGGGAAGACGGGATAAAGAATGACGACCCTGAACTTAAGGCCAGAATCTAGCCTGTTTTGTATTTCTTGTGAGGGGAAATGAAAATCTTTCTCATCACCAAACACCACCTGgacactttttaataaaaatgtgaactgAACAAATGTTCTAGTGCTTTGCCGCTGAGGGGAGCGAGAAGACTGATAATCTCGCCATGACGGGGAAAATGGCTTCTCAATGCCTCtacatacatttacagtatatatgccATTATTAACATGGAAGCCTTGAAACGCTTCAAGGCTAAATCTATCTCATCTTCCTTTTATTAACTTAAGACTTCCTATTTTTAAAGCACTTCATTcgcgcatatatatatatatatatatatata
>XM_039824074.1
GACAGCTGGAGGATGCAGGTATCGTGACTGCACTGCTCAGTGCGCAGTCTCCTCGATCTACTGTGGCTTGGGTTGTGCTTCATTTGTGcgtcgctttggacaaaagcgtctgccaaatgaatgataatATGAACCGGAGAGCAAGAAGCTGGCTGCACAGAGTGACTTAGATTCAGCCAATGCATTGTCTATTGGTGCACAGCTAGCTGCTCTTGCACAACAAAGGCCCGCCTACAGCACAGAGGAGTACAGTGTACCAGACAGCATGGTGGGACTCATTATTGGCCGTGGAGGTGAACAGATCAATAAGATTCAACAGGAGTCAGGTTGCAAGGTTCAGATAGCTCCAGacAGCGGAGGCCTTCCAGACAGGAGAGTCTCTCTTACAGGTTCCCCAGACTCCATACAGAATGCCAAGGGGCTGTTGGATGAGATAGTCTCACGAGGGAGGGGTACACCCCCTTCTTCTTATCACGAGTCCACTAACGGGCAGAATGGCACGGTGCATGAGATGATGATTCCAGCTGGCAAGGCTGGTCTTGTCATTGGCAAAGGAGGCGAGACTATCAAACAGCTACAGGAGCGTGCAGGGGTGAAGATGATCCTGATCCAGGATGCCTCTCAGGGACCCAACGTTGACAAGCCCCTGCGCATTATCGGAGAACCCTACAAAGTCCAGCAAGCCCAGGAGATGGTGCAGGAGATTCTGAGGGAGAGAGACCACGGTGGCTTTAGTGAAAGAAATGATTTTGGCCCCCGAATGGGAGGAGGCATGGATATCCCTGTACCAAGACACTCAGTCGGTGTGGTCATCGGGCGCAATGGAGAGATGATTAAGAAAATACAGAATGATGCTGGAGTTCGGATACAGTTCAAACAAGATGATGGGACTGGTCCAGATAAGATTGCTCACGTCAGTGGTCCCCCTGACCGCTGCGAGCATGCTGCCCAGATCATCAACGACCTGCTGCAGAGCATCAGGGTCAGGGAGGAGGGACAGGGGGGTCCCCCAGGTCCTCCAGGCATGCCTGCAGGCAACAGGGGCCGAGGTGGGGGACAAGGCGGTTGGGGGTCCCCTGGAGGGGAAATGACCTTCTCTATTCCTGCCCACAAGTGTGGGCTAGTGATTGGCCGGGGAGGAGAGAACGTCAAGTCCATCAACCAGCAGACCGGGGCGTTTGTAGAAATCTCTCGACAGCCGCCCCCCAACGGAGACCCCAACTTCAAGCTTTTTATCATTCGGGGCTCACCGCAGCAGATCGACCACGCCAAGCAGCTCATTGAGGAGAAGATTGAGGGTCCTCTGTGTCCTGTGGGTCAGGGGCCAGGTGGACCAGGTCCTGCTGGTCCAATGGGTCCCTTCAACCCCAACCCATACAACCCCGGGCCGCCTGGGGCACCCGGACCACCACATGGCGGTCCTCCAGGTCCTCACCAGTACACCCCTCAGGGCTGGAGCAACACCTTCCAGCAGTGGCAGCCTCAGGCACCCCATGACCCCAGCAAGGCAGCAGCCAATGACCCCAACGCAGCCTGGGCGGCCTACTACGCTCAGTACTACCAGCAGCCATCGGGGGCTGTGCCAGCCCAGTACCCTGCTAACCCAGCTGGAGGTGCCCAAACTTCAGGGGACCAGACCCAGCCTGCACAGACGCCGGGGGGCCAGCCAGACTACACCAAGGCCTGGGAGGACTACTACAAGAAGATGGCCCAGGCAGGTGGCTCGGTCCCTGCGACAGCAGCTGCAGCCCCAGGAGCAGCTGGAGGAGCAGCATCCACAACGGGGGGCCAGCCGGACTACAGCGCAGCCTGGGCAGAGTACTACAGGCAGCAGGCTGCGTACTATGGACCGACAGGACAGGCCCCCGGCCAGCCAGCCACTCCCCAGCAAGGACAGACGCAGTGAAAGTTCATGGCAGGAGGTCTTGGGAGAGAATCGGGAAGACGGGATAAAGAATGACGACCCTGAACTTAAGGCCAGAATCTAGCCTGTTTTGTATTTCTTGTGAGGGGAAATGAAAATCTTTCTCATCACCAAACACCACCTGgacactttttaataaaaatgtgaactgAACAAATGTTCTAGTGCTTTGCCGCTGAGGGGAGCGAGAAGACTGATAATCTCGCCATGACGGGGAAAATGGCTTCTCAATGCCTCtacatacatttacagtatatatgccATTATTAACATGGAAGCCTTGAAACGCTTCAAGGCTAAATCTATCTCATCTTCCTTTTATTAACTTAAGACTTCCTATTTTTAAAGCACTTCATTcgcgcatatatatatatatatatatatata
>XM_039824075.1
TGTCTCCGGGTGTACCCGTTAGTTTCTTGACTTTAACACTCCTGCGCAGATCCCGGTTTTTGGCTGCCTTTTCCTCGCCTGTTTTCTGGTCAACATGTCGGAGTATAATGTGGTGCCGCCACCCGGGTCCGGGGCCCCTCTCGGCGGACAGGCGGGTCTTGGGAACGGAGCTGGAGACATCAAGAAAGATGCGTTTGCGGACGCGGTGCAGCGGGCACGGCAGattgcaGCTAAGATCGGGGGTGATACTGGTCCTCCCATGAACAACAACACTGCATCAGATGGCTTTCCATTCACTGCACAGAAACGACAGCTGGAGGATGCAGATGAACCGGAGAGCAAGAAGCTGGCTGCACAGAGTGACTTAGATTCAGCCAATGCATTGTCTATTGGTGCACAGCTAGCTGCTCTTGCACAACAAAGGCCCGCCTACAGCACAGAGGAGTACAGTGTACCAGACAGCATGGTGGGACTCATTATTGGCCGTGGAGGTGAACAGATCAATAAGATTCAACAGGAGTCAGGTTGCAAGGTTCAGATAGCTCCAGacAGCGGAGGCCTTCCAGACAGGAGAGTCTCTCTTACAGGTTCCCCAGACTCCATACAGAATGCCAAGGGGCTGTTGGATGAGATAGTCTCACGAGGGAGGGGTACACCCCCTTCTTCTTATCACGAGTCCACTAACGGGCAGAATGGCACGGTGCATGAGATGATGATTCCAGCTGGCAAGGCTGGTCTTGTCATTGGCAAAGGAGGCGAGACTATCAAACAGCTACAGGAGCGTGCAGGGGTGAAGATGATCCTGATCCAGGATGCCTCTCAGGGACCCAACGTTGACAAGCCCCTGCGCATTATCGGAGAACCCTACAAAGTCCAGCAAGCCCAGGAGATGGTGCAGGAGATTCTGAGGGAGAGAGACCACGGTGGCTTTAGTGAAAGAAATGATTTTGGCCCCCGAATGGGAGGAGGCATGGATATCCCTGTACCAAGACACTCAGTCGGTGTGGTCATCGGGCGCAATGGAGAGATGATTAAGAAAATACAGAATGATGCTGGAGTTCGGATACAGTTCAAACAAGATGATGGGACTGGTCCAGATAAGATTGCTCACGTCAGTGGTCCCCCTGACCGCTGCGAGCATGCTGCCCAGATCATCAACGACCTGCTGCAGAGCATCAGGGTCAGGGAGGAGGGACAGGGGGGTCCCCCAGGTCCTCCAGGCATGCCTGCAGGCAACAGGGGCCGAGGTGGGGGACAAGGCGGTTGGGGGTCCCCTGGAGGGGAAATGACCTTCTCTATTCCTGCCCACAAGTGTGGGCTAGTGATTGGCCGGGGAGGAGAGAACGTCAAGTCCATCAACCAGCAGACCGGGGCGTTTGTAGAAATCTCTCGACAGCCGCCCCCCAACGGAGACCCCAACTTCAAGCTTTTTATCATTCGGGGCTCACCGCAGCAGATCGACCACGCCAAGCAGCTCATTGAGGAGAAGATTGAGGGTCCTCTGTGTCCTGTGGGTCAGGGGCCAGGTGGACCAGGTCCTGCTGGTCCAATGGGTCCCTTCAACCCCAACCCATACAACCCCGGGCCGCCTGGGGCACCCGGACCACCACATGGCGGTCCTCCAGGTCCTCACCAGTACACCCCTCAGGGCTGGAGCAACACCTTCCAGCAGTGGCAGCCTCAGGCACCCCATGACCCCAGTCTCCAAGCCCGGTCTCCAGGCCAGTAGCAGGGGCTCACCCTCACCCTATGAGGACCTCACCCCTCCACCCTGCATCTTTTCTAGGCAAGGCAGCAGCCAATGACCCCAACGCAGCCTGGGCGGCCTACTACGCTCAGTACTACCAGCAGCCATCGGGGGCTGTGCCAGCCCAGTACCCTGCTAACCCAGCTGGAGGTGCCCAAACTTCAGGGGACCAGAC
>XM_039824076.1
TGTCTCCGGGTGTACCCGTTAGTTTCTTGACTTTAACACTCCTGCGCAGATCCCGGTTTTTGGCTGCCTTTTCCTCGCCTGTTTTCTGGTCAACATGTCGGAGTATAATGTGGTGCCGCCACCCGGGTCCGGGGCCCCTCTCGGCGGACAGGCGGGTCTTGGGAACGGAGCTGGAGACATCAAGAAAGATGCGTTTGCGGACGCGGTGCAGCGGGCACGGCAGattgcaGCTAAGATCGGGGGTGATACTGGTCCTCCCATGAACAACAACACTGCATCAGATGGCTTTCCATTCACTGCACAGAAACGACAGCTGGAGGATGCAGATGAACCGGAGAGCAAGAAGCTGGCTGCACAGAGTGACTTAGATTCAGCCAATGCATTGTCTATTGGTGCACAGCTAGCTGCTCTTGCACAACAAAGGCCCGCCTACAGCACAGAGGAGTACAGTGTACCAGACAGCATGGTGGGACTCATTATTGGCCGTGGAGGTGAACAGATCAATAAGATTCAACAGGAGTCAGGTTGCAAGGTTCAGATAGCTCCAGacAGCGGAGGCCTTCCAGACAGGAGAGTCTCTCTTACAGGTTCCCCAGACTCCATACAGAATGCCAAGGGGCTGTTGGATGAGATAGTCTCACGAGGGAGGGGTACACCCCCTTCTTCTTATCACGAGTCCACTAACGGGCAGAATGGCACGGTGCATGAGATGATGATTCCAGCTGGCAAGGCTGGTCTTGTCATTGGCAAAGGAGGCGAGACTATCAAACAGCTACAGGAGCGTGCAGGGGTGAAGATGATCCTGATCCAGGATGCCTCTCAGGGACCCAACGTTGACAAGCCCCTGCGCATTATCGGAGAACCCTACAAAGTCCAGCAAGCCCAGGAGATGGTGCAGGAGATTCTGAGGGAGAGAGACCACGGTGGCTTTAGTGAAAGAAATGATTTTGGCCCCCGAATGGGAGGAGGCATGGATATCCCTGTACCAAGACACTCAGTCGGTGTGGTCATCGGGCGCAATGGAGAGATGATTAAGAAAATACAGAATGATGCTGGAGTTCGGATACAGTTCAAACAAGATGATGGGACTGGTCCAGATAAGATTGCTCACGTCAGTGGTCCCCCTGACCGCTGCGAGCATGCTGCCCAGATCATCAACGACCTGCTGCAGAGCATCAGGGTCAGGGAGGAGGGACAGGGGGGTCCCCCAGGTCCTCCAGGCATGCCTGCAGGCAACAGGGGCCGAGGTGGGGGACAAGGCGGTTGGGGGTCCCCTGGAGGGGAAATGACCTTCTCTATTCCTGCCCACAAGTGTGGGCTAGTGATTGGCCGGGGAGGAGAGAACGTCAAGTCCATCAACCAGCAGACCGGGGCGTTTGTAGAAATCTCTCGACAGCCGCCCCCCAACGGAGACCCCAACTTCAAGCTTTTTATCATTCGGGGCTCACCGCAGCAGATCGACCACGCCAAGCAGCTCATTGAGGAGAAGATTGAGGGTCCTCTGTGTCCTGTGGGTCAGGGGCCAGGTGGACCAGGTCCTGCTGGTCCAATGGGTCCCTTCAACCCCAACCCATACAACCCCGGGCCGCCTGGGGCACCCGGACCACCACATGGCGGTCCTCCAGGTCCTCACCAGTACACCCCTCAGGGCTGGAGCAACACCTTCCAGCAGTGGCAGCCTCAGGCACCCCATGACCCCACCCGGTCTCCAGGCCAGTAGCAGGGGCTCACCCTCACCCTATGAGGACCTCACCCCTCCACCCTGCATCTTTTCTAGGCAAGGCAGCAGCCAATGACCCCAACGCAGCCTGGGCGGCCTACTACGCTCAGTACTACCAGCAGCCATCGGGGGCTGTGCCAGCCCAGTACCCTGCTAACCCAGCTGGAGGTGCCCAAACTTCAGGGGACCAGAC

Function

NR:

description
PREDICTED: far upstream element-binding protein 2-like

GO: NA

KEGG:

id description
K13210 FUBP; far upstream element-binding protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039824073.1 True 2509 mRNA 0.55 18 11008642 11016591
XM_039824074.1 False 2311 mRNA 0.55 17 11008642 11015694
XM_039824075.1 False 1922 mRNA 0.57 16 11010199 11016591
XM_039824076.1 False 1913 mRNA 0.57 16 11010199 11016591

Neighbor

gene id symbol gene type direction distance location
rln3a LOC104944611,LOC103360695 coding downstream 14612 10988167 ~ 10994030 (-)
il12rb2l NA coding downstream 21482 10975641 ~ 10987160 (-)
LOC120575016 tnpo2,LOC103360699 coding downstream 38886 10954170 ~ 10969756 (-)
LOC120575512 NA coding downstream 40468 10968106 ~ 10968174 (-)
fbxw9 NA coding downstream 60972 10942812 ~ 10947670 (-)
c15h17orf75 clg4h17orf75,clg8h17orf75,LOC102789701,LOC101467397,LOC102229770,LOC106934014,LOC106960136 coding upstream 41301 11057892 ~ 11063850 (-)
LOC120574485 NA coding upstream 65128 11081719 ~ 11084573 (-)
LOC120574065 NA coding upstream 155930 11172521 ~ 11263721 (-)
LOC120573949 NA coding upstream 273275 11289866 ~ 11293711 (-)
LOC120573873 hn1 coding upstream 282616 11299207 ~ 11309655 (-)
G153950 NA non-coding downstream 49121 10950571 ~ 10959521 (-)
G153937 NA non-coding downstream 101034 10905355 ~ 10907608 (-)
G153734 NA non-coding downstream 413635 10594743 ~ 10595007 (-)
G153671 NA non-coding downstream 714476 10286635 ~ 10294166 (-)
G153663 NA non-coding downstream 839203 10163444 ~ 10169439 (-)
G153943 LOC104934589,LOC102791985 non-coding upstream 16615 11033206 ~ 11035516 (-)
G153987 NA non-coding upstream 52452 11069043 ~ 11073776 (-)
G154036 NA non-coding upstream 255228 11271819 ~ 11272848 (-)
G154088 NA non-coding upstream 335612 11352203 ~ 11352565 (-)
G154115 NA non-coding upstream 450317 11466908 ~ 11467112 (-)
LOC120574455 NA other downstream 217077 10784112 ~ 10791565 (-)
gtpbp1 gtpbp1,LOC104924447,LOC102799794 other downstream 618466 10352158 ~ 10390176 (-)
LOC120574648 NA other downstream 1185649 9822145 ~ 9822993 (-)
LOC120574583 NA other downstream 1271808 9735626 ~ 9736834 (-)
LOC120574609 NA other downstream 1275447 9732686 ~ 9733195 (-)
LOC120574486 NA other upstream 61954 11078545 ~ 11080607 (-)
tnrc6c1 LOC103361861 other upstream 81725 11098316 ~ 11137528 (-)
G154033 NA other upstream 186859 11203450 ~ 11225546 (-)
LOC120574419 NA other upstream 1069394 12085985 ~ 12090981 (-)
cep112 NA other upstream 1410913 12427504 ~ 12565471 (-)

Expression


Co-expression Network